CX289866

Overview
NameCX289866
Unique NameCX289866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CKB11_ARATH (Cyclin-dependent kinase B1-1 OS=Arabidopsis thaliana GN=CDKB1-1 PE=1 SV=2)

HSP 1 Score: 339.347 bits (869), Expect = 1.152e-92
Identity = 172/222 (77.48%), Postives = 181/222 (81.53%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            MEKYEKLEKVGEGTYGKVYKA +K TG+LVALKKTRLEMDEEGIPPTALRE+SLLQMLS S+YVVRLLCVEHV      + PS  S S        KSNLYLVFEYLDTDLKKFIDS+RKGPNP+PL P LIQ  ++QLCKGVAHCHSHGVLHRDLKPQN               GLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYST VDMWSVGCIF
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKAMEKGTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSTSIYVVRLLCVEHV------HQPSTKSQST-------KSNLYLVFEYLDTDLKKFIDSYRKGPNPKPLEPFLIQKLMFQLCKGVAHCHSHGVLHRDLKPQNLLLVKDKELLKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTGVDMWSVGCIF 209          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CKB12_ARATH (Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2)

HSP 1 Score: 334.339 bits (856), Expect = 3.705e-91
Identity = 168/222 (75.68%), Postives = 181/222 (81.53%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            MEKYEKLEKVGEGTYGKVYKA +K TG+LVALKKTRLEMDEEGIPPTALRE+SLLQMLSQS+Y+VRLLCVEHV  S  S             S++ KSNLYLVFEYLDTDLKKFIDSHRKG NPRPL  +L+Q F++QL KGVAHCHSHGVLHRDLKPQN               GL RAFTVPLK+YTHEIVTLWYRAPEVLLGSTHYSTAVD+WSVGCIF
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSQSIYIVRLLCVEHVIQSKDST-----------VSHSPKSNLYLVFEYLDTDLKKFIDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIF 211          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CDC2C_ANTMA (Cell division control protein 2 homolog C OS=Antirrhinum majus GN=CDC2C PE=2 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 5.349e-90
Identity = 170/222 (76.58%), Postives = 179/222 (80.63%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            MEKYEKLEKVGEGTYGKVYKA +K+TGQ+VALKKTRLEMDEEG+PPTALREVSLLQMLSQSLYVVRLL VEHVD +                  NGK  LYLVFEYLDTDLKKFIDSHRKGPNPRPLPP  IQSFL+QLCKGV+HCH+HGVLHRDLKPQN               GL RAFTVPLKSYTHEIVTL YRAPEVLLGS+HYSTAVDM SVGCIF
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKALEKSTGQVVALKKTRLEMDEEGVPPTALREVSLLQMLSQSLYVVRLLSVEHVDCA-----------------KNGKPLLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPQQIQSFLFQLCKGVSHCHAHGVLHRDLKPQNLLLDKDKGVLKIADLGLARAFTVPLKSYTHEIVTLSYRAPEVLLGSSHYSTAVDMSSVGCIF 205          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CKB11_ORYSJ (Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.655e-89
Identity = 163/222 (73.42%), Postives = 178/222 (80.18%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            MEKYEKLEKVGEGTYGKVYKA+D+ATGQLVALKKTRLEMDEEGIPPTALRE+S+L++LSQSLYVVRLL VE                     + NGK  LYLVFE+LDTDLKKF+D++RKGPNPRPLP  +I+SFLYQLCKGVAHCH HGVLHRDLKPQN               GLGRAFTVP+KSYTHEIVTLWYRAPEVLLGSTHYST VD+WSVGCIF
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKAQDRATGQLVALKKTRLEMDEEGIPPTALREISILRLLSQSLYVVRLLSVEQA-------------------TKNGKPVLYLVFEFLDTDLKKFVDAYRKGPNPRPLPTNVIKSFLYQLCKGVAHCHGHGVLHRDLKPQNLLVDKEKGILKIADLGLGRAFTVPMKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSVGCIF 203          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 6.798e-69
Identity = 133/222 (59.91%), Postives = 159/222 (71.62%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            M+ YEKLEKVGEGTYGKVYKA++KATG++VALKKTRL  D+EG+PPTALREVSLL+MLSQ  +VVRLL ++                     +  G++ LYLVFEY+DTDLKKFI +HR+  N + +P   ++  +YQLCKGVA CH  GVLHRDLKP N               GL R+FTVPLK YTHEI+TLWYRAPEVLLG+ HYST VD+WSVGCIF
Sbjct:   25 MDLYEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLPEDDEGVPPTALREVSLLRMLSQDSHVVRLLDLKQ------------------GQNKEGQTILYLVFEYMDTDLKKFIRAHRQ--NLQKIPVPTVKILMYQLCKGVAFCHGRGVLHRDLKPHNLLMDRKTMALKIADLGLSRSFTVPLKKYTHEILTLWYRAPEVLLGAAHYSTPVDIWSVGCIF 226          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CKB22_ARATH (Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2 PE=1 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 2.583e-68
Identity = 131/231 (56.71%), Postives = 160/231 (69.26%), Query Frame = 1
Query:   10 GSQSRTERMEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRK-GPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            G +     ME +EKLEKVGEGTYGKVY+A++KATG +VALKKTRL  DEEG+PPT LRE+S+L+ML++  ++VRL+ V+                     +  GK+ LYLVFEY+DTDLKKFI S R+ G N   +P   ++  +YQLCKG+A CH HGVLHRDLKP N               GL RAFT+P+K YTHEI+TLWYRAPEVLLG+THYST VDMWSVGCIF
Sbjct:    5 GVKPAVSAMEAFEKLEKVGEGTYGKVYRAREKATGMIVALKKTRLHEDEEGVPPTTLREISILRMLARDPHIVRLMDVKQ------------------GINKEGKTVLYLVFEYVDTDLKKFIRSFRQAGQN---IPQNTVKCLMYQLCKGMAFCHGHGVLHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYSTGVDMWSVGCIF 214          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CKB21_ARATH (Cyclin-dependent kinase B2-1 OS=Arabidopsis thaliana GN=CDKB2-1 PE=1 SV=2)

HSP 1 Score: 257.299 bits (656), Expect = 5.755e-68
Identity = 129/222 (58.11%), Postives = 158/222 (71.17%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            M+ +EKLEKVGEGTYGKVY+A++KATG++VALKKTRL  DEEG+P T LRE+S+L+ML++  +VVRL+ V+                     S  GK+ LYLVFEY+DTD+KKFI S R     + +P   I+S +YQLCKG+A CH HG+LHRDLKP N               GL RAFT+P+K YTHEI+TLWYRAPEVLLG+THYSTAVDMWSVGCIF
Sbjct:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPSTTLREISILRMLARDPHVVRLMDVKQ------------------GLSKEGKTVLYLVFEYMDTDVKKFIRSFRS--TGKNIPTQTIKSLMYQLCKGMAFCHGHGILHRDLKPHNLLMDPKTMRLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVGCIF 212          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CDC2D_ANTMA (Cell division control protein 2 homolog D OS=Antirrhinum majus GN=CDC2D PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 8.310e-67
Identity = 129/228 (56.58%), Postives = 159/228 (69.74%), Query Frame = 1
Query:   16 QSRTERMEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            +S++  M+ + KLEKVGEGTYGKVY+A +K+TG++VALKKTRL  DEEG+PPT LREVSLL+MLS+  +VVRLL V+                     +  GK+ LYLVFEY+DTDLKK+I S ++      + P  ++S +YQLCKGVA CH HGVLHRDLKP N               GL RA+T+P+K YTHEI+TLWYRAPEVLLG+THYS AVDMWSV CIF
Sbjct:    5 KSKSSAMDAFVKLEKVGEGTYGKVYRAMEKSTGKIVALKKTRLHEDEEGVPPTTLREVSLLRMLSRDPHVVRLLDVKQ------------------GQNKEGKTVLYLVFEYMDTDLKKYIRSFKQ--TGESIAPMNVKSLMYQLCKGVAFCHGHGVLHRDLKPHNLLMDRKTMMLKIADLGLARAYTLPIKKYTHEILTLWYRAPEVLLGATHYSPAVDMWSVACIF 212          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CDKA1_ORYSJ (Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.052e-57
Identity = 116/222 (52.25%), Postives = 146/222 (65.77%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            ME+YEK EK+GEGTYG VY+A+DK T + +ALKK RLE ++EG+P TA+RE+SLL+ +     +VRL  V H                        +  +YLVFEYLD DLKKF+DS  +        PTLI+S+LYQ+ +GVA+CHSH VLHRDLKPQN               GL RAF +P++++THE+VTLWYRAPE+LLGS  YST VDMWSVGCIF
Sbjct:    1 MEQYEKEEKIGEGTYGVVYRARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHG-NIVRLHDVIH-----------------------SEKRIYLVFEYLDLDLKKFMDSCPEFAKN----PTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRQYSTPVDMWSVGCIF 194          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CDC2_MAIZE (Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.052e-57
Identity = 116/222 (52.25%), Postives = 147/222 (66.22%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            ME+YEK+EK+GEGTYG VYKA DKAT + +ALKK RLE ++EG+P TA+RE+SLL+ ++    +VRL  V H                        +  +YLVFEYLD DLKKF+DS  +        PTLI+S+LYQ+  GVA+CHSH VLHRDLKPQN               GL RAF +P++++THE+VTLWYRAPE+LLG+  YST VD+WSVGCIF
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHG-NIVRLHDVVH-----------------------SEKRIYLVFEYLDLDLKKFMDSCPEFAKN----PTLIKSYLYQILHGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIF 194          
The following BLAST results are available for this feature:
BLAST of CX289866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CKB11_ARATH1.152e-9277.48Cyclin-dependent kinase B1-1 OS=Arabidopsis thalia... [more]
CKB12_ARATH3.705e-9175.68Cyclin-dependent kinase B1-2 OS=Arabidopsis thalia... [more]
CDC2C_ANTMA5.349e-9076.58Cell division control protein 2 homolog C OS=Antir... [more]
CKB11_ORYSJ2.655e-8973.42Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp... [more]
CKB21_ORYSJ6.798e-6959.91Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]
CKB22_ARATH2.583e-6856.71Cyclin-dependent kinase B2-2 OS=Arabidopsis thalia... [more]
CKB21_ARATH5.755e-6858.11Cyclin-dependent kinase B2-1 OS=Arabidopsis thalia... [more]
CDC2D_ANTMA8.310e-6756.58Cell division control protein 2 homolog D OS=Antir... [more]
CDKA1_ORYSJ2.052e-5752.25Cyclin-dependent kinase A-1 OS=Oryza sativa subsp.... [more]
CDC2_MAIZE2.052e-5752.25Cell division control protein 2 homolog OS=Zea may... [more]

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Properties
Property NameValue
Genbank descriptionC02018A01SK IF1 Citrus clementina cDNA clone C02018A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289866 ID=CX289866; Name=CX289866; organism=Citrus clementina; type=EST; length=701bp
AAATTCTAGGGTTCGCAGAGCAGAACAGAGAGGATGGAGAAGTACGAGAA
GCTAGAGAAGGTGGGAGAAGGAACGTACGGGAAAGTGTACAAGGCAAAGG
ACAAAGCGACCGGGCAGTTGGTTGCTCTGAAGAAAACAAGACTCGAAATG
GACGAAGAAGGCATCCCCCCGACCGCTCTCCGCGAAGTGTCCCTCCTCCA
GATGCTCTCTCAATCCCTTTACGTCGTCCGCCTCCTCTGCGTCGAACACG
TGGACTCCTCTCTCAAATCCAACAACCCCAGCCCCGACTCCGCTTCCGCC
TTCGCCACCTCCAACAACGGCAAGTCTAATCTCTATCTCGTGTTTGAATA
CCTCGATACCGATCTAAAGAAATTCATCGACTCGCACCGCAAGGGCCCCA
ATCCGAGGCCGCTGCCCCCCACTCTCATTCAGAGCTTCTTGTACCAGCTT
TGCAAAGGCGTCGCCCACTGCCACAGCCACGGTGTCCTTCATCGCGACCT
GAAGCCGCAGAATCTTCTCCTTGATAAGGACAAGGGGATTCTCAAGATCG
CCGATCTTGGCCTCGGACGCGCCTTCACCGTTCCTCTCAAAAGCTATACC
CACGAGATTGTTACTCTCTGGTATAGGGCTCCCGAGGTGCTTCTTGGTTC
CACTCATTACTCCACTGCTGTCGACATGTGGTCCGTTGGTTGCATTTTCG
C
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