CX289871

Overview
NameCX289871
Unique NameCX289871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289871 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.485e-37
Identity = 99/237 (41.77%), Postives = 136/237 (57.38%), Query Frame = 3
Query:   30 QDFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYL--KEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAE-GHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEK----IKETLPTDHH 719
            Q F+ EV LL +L HPNIVQF+ A  +     +ITEY+  G+L  YL  KE  +LS  T +  ALDI+RGM YLH++   +IHRDLK  N+LL +     +KV DFG S L          +  G  G+YR+MAPE+ K + Y +KVDV+SF ++L+E+     P     P +AA  VAE   RP   A    P L  L ++CW+ + ++RP F +I+  LEK    +KE LP   H
Sbjct:  130 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPYSLSIETVLRLALDISRGMEYLHSQG--VIHRDLKSNNLLLNDEM--RVKVADFGTSCL-----ETQCREAKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPA-SCQPALAHLIKRCWSENPSKRPDFSNIVAVLEKYDECVKEGLPLTSH 356          
BLAST of CX289871 vs. ExPASy Swiss-Prot
Match: PYK1_DICDI (Dual specificity protein kinase pyk1 OS=Dictyostelium discoideum GN=splA PE=1 SV=3)

HSP 1 Score: 144.821 bits (364), Expect = 4.387e-34
Identity = 94/249 (37.75%), Postives = 142/249 (57.03%), Query Frame = 3
Query:    3 FGTRDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTE--RKPLMLITEYLRGGDLHKYLKEKGAL---SPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLL----------VNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVA-EGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 698
            F T+  LV+  F++EV +L KLRHPN+VQFLGA T        ++TE++ GG L ++L +   L   +P   +  ALDIA+GM YLH     I+HRDL  RN+LL          V+S  D   K+ DFGLS+L   Q S    +MT   G   YMAPEVFK     +K DV+S+ M+L+E+L  + P  + +P + A   A E +RP       + + +E+  +CW ++ + RP+F  I+  L+++++
Sbjct: 2149 FKTKSSLVM--FQNEVGILSKLRHPNVVQFLGACTAGGEDHHCIVTEWMGGGSLRQFLTDHFNLLEQNPHIRLKLALDIAKGMNYLHGWTPPILHRDLSSRNILLDHNIDPKNPVVSSRQDIKCKISDFGLSRLKMEQAS----QMTQSVGCIPYMAPEVFKGDSNSEKSDVYSYGMVLFELLTSDEPQQDMKPMKMAHLAAYESYRPPIPLT-TSSKWKEILTQCWDSNPDSRPTFKQIIVHLKEMED 2390          
BLAST of CX289871 vs. ExPASy Swiss-Prot
Match: YTYK2_DICDI (Probable tyrosine-protein kinase DDB_G0283397 OS=Dictyostelium discoideum GN=DDB_G0283397 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.730e-34
Identity = 96/235 (40.85%), Postives = 129/235 (54.89%), Query Frame = 3
Query:   12 RDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTERKPL---MLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIARGMAYLHN--EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIK 695
            RD    + F  EV+++ KL HP  V F+GA +   P     +I EY+ GG L + L EK +  L PS  ++ A DIA GM YLH   +   I+HRDL   N+LL NSS    K+ DFGLSK +K   +    +MT   GS  +MAPE FK   Y +KVDV+SFA+IL+E++    P    EP   A ++A          GF P   EL  KCW    + RPSF +IL+ L +I+
Sbjct:  212 RDLTETEIFDKEVSIMSKLCHPTCVMFIGACSLDGPSNDRSIIMEYMEGGSLRRLLDEKSSYHLPPSLQLSIARDIAEGMNYLHTNFKEGPIVHRDLTSSNILL-NSSYTVAKINDFGLSKEMKPGPT----EMTAAMGSLAWMAPECFKAENYTEKVDVYSFAIILWEIVTCRDPYNGMEPLRLA-FLASVEDYRLPLNGFPPYWVELISKCWNITPSLRPSFKEILQILNQIE 440          
BLAST of CX289871 vs. ExPASy Swiss-Prot
Match: 7TMK1_DICDI (Seven transmembrane domain-containing tyrosine-protein kinase 1 OS=Dictyostelium discoideum GN=7tmk1 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.274e-33
Identity = 91/224 (40.62%), Postives = 123/224 (54.91%), Query Frame = 3
Query:   36 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGAL---SPSTAVNFALDIARGMAYLHN-EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVA-EGHRPFF--RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 686
            F  EV +L  LRHPN++QFLG  +E     ++TEY+ GG L + L ++  L   +P  A N A+ IARGM YLH+ +PN I+HRDL  +N+LL + S    KV DFGLSK          ++MT   G   Y APEVF    Y  K DV+SF ++++ ++ GE P  N +P + A   A E +RP            L +L E CW     +RPSF  IL  LE
Sbjct:  409 FLKEVAILSILRHPNVLQFLGVCSETNLNGIVTEYMGGGSLDRLLTDRYFLIKQNPILAWNMAISIARGMFYLHDWKPNPILHRDLSTKNILL-DESLTIAKVADFGLSK-------EQGFEMTSTVGHLCYQAPEVFIGELYTPKADVYSFGLLVWCIITGEQPNQNLQPLKMAHLAAYENYRPPMPQPMDPMWENLGKLIEMCWKKSPEERPSFSFILDFLE 624          
BLAST of CX289871 vs. ExPASy Swiss-Prot
Match: CTR1_ARATH (Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.148e-32
Identity = 82/231 (35.50%), Postives = 124/231 (53.68%), Query Frame = 3
Query:   27 IQDFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA---LSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEK-IKETLP 707
            + +F  EV ++ +LRHPNIV F+GAVT+   L ++TEYL  G L++ L + GA   L     ++ A D+A+GM YLHN    I+HRDLK  N+L+       +KV DFGLS+L     +          G+  +MAPEV +    ++K DV+SF +IL+E+   + P  N  P +    V    +     +   P++  + E CW  +  +RPSF  I+  L   IK  +P
Sbjct:  590 VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYT--VKVCDFGLSRL----KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 814          
BLAST of CX289871 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.195e-31
Identity = 88/223 (39.46%), Postives = 121/223 (54.26%), Query Frame = 3
Query:   24 VIQDFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKG-ALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK-MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 686
            +I D R EV+LL KLRHPNIV F+GA TE     ++TEYL  G L   L ++   +     +    D ARGM YLH+   +IIHRDLK  N+L+ +S    +KV DFGL+ +     SH   K M G TG   ++APEV     Y +K DV+S+A++L+E+L    P A     +  + +  G R    A    P+   L  +CW  D   RPSF +IL  +E
Sbjct:  889 LISDLRKEVDLLCKLRHPNIVLFMGACTEPSSPCIVTEYLSRGSLANILLDESIEMDWGLRLQLGFDCARGMTYLHSRNPIIIHRDLKTDNLLVDDSW--QVKVADFGLATV----KSHTFAKTMCGTTG---WVAPEVLAEEGYTEKADVYSYAIVLWELLTRLIPYAGKNTMQVVRSIDRGERLPMPA-WCPPKYAALMNRCWETDPTHRPSFPEILPIME 1101          
BLAST of CX289871 vs. ExPASy Swiss-Prot
Match: M3K10_MOUSE (Mitogen-activated protein kinase kinase kinase 10 OS=Mus musculus GN=Map3k10 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.038e-31
Identity = 86/231 (37.23%), Postives = 122/231 (52.81%), Query Frame = 3
Query:   30 QDFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE-PNVIIHRDLKPRNVLLVNSSADH------LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKET 701
            +  R E  L   L+HPNI+   GA      L L+ EY RGG L + L  +  + P   VN+A+ +ARGM YLHN+ P  IIHRDLK  N+L++ +  +H      LK+ DFGL++       H   KM+   G+Y +MAPEV +   + K  DV+SF ++L+E+L GE P    +    A  VA                  L E+CW  D + RP F  ILK+LE I+++
Sbjct:  140 EQVRQEARLFGALQHPNIIALRGACLSPPNLCLVMEYARGGALSRVLAGR-RVPPHVLVNWAVQVARGMNYLHNDAPVPIIHRDLKSINILILEAIENHNLADTVLKITDFGLAR-----EWHKTTKMSA-AGTYAWMAPEVIRLSLFSKSSDVWSFGVLLWELLTGEVPYREIDALAVAYGVAMNKLTLPIPSTCPEPFARLLEECWDPDPHGRPDFGSILKQLEVIEQS 363          
BLAST of CX289871 vs. ExPASy Swiss-Prot
Match: M3K9_HUMAN (Mitogen-activated protein kinase kinase kinase 9 OS=Homo sapiens GN=MAP3K9 PE=1 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 2.662e-31
Identity = 86/232 (37.07%), Postives = 123/232 (53.02%), Query Frame = 3
Query:   27 IQDFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV-IIHRDLKPRNVLLVNS------SADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKET 701
            I++ R E  L   L+HPNI+   G   +   L L+ E+ RGG L++ L  K  + P   VN+A+ IARGM YLH+E  V IIHRDLK  N+L++        S   LK+ DFGL++       H   KM+   G+Y +MAPEV +   + K  DV+S+ ++L+E+L GE P    +    A  VA                 +L E CW  D + RPSF +IL +L  I+E+
Sbjct:  185 IENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSA-AGTYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTIEES 409          
BLAST of CX289871 vs. ExPASy Swiss-Prot
Match: M3K10_HUMAN (Mitogen-activated protein kinase kinase kinase 10 OS=Homo sapiens GN=MAP3K10 PE=1 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 3.476e-31
Identity = 86/226 (38.05%), Postives = 120/226 (53.10%), Query Frame = 3
Query:   45 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE-PNVIIHRDLKPRNVLLVNSSADH------LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKET 701
            E  L   L+HPNI+   GA      L L+ EY RGG L + L  +  + P   VN+A+ +ARGM YLHN+ P  IIHRDLK  N+L++ +  +H      LK+ DFGL++       H   KM+   G+Y +MAPEV +   + K  DV+SF ++L+E+L GE P    +    A  VA                  L E+CW  D + RP F  ILKRLE I+++
Sbjct:  145 EARLFGALQHPNIIALRGACLNPPHLCLVMEYARGGALSRVLAGR-RVPPHVLVNWAVQVARGMNYLHNDAPVPIIHRDLKSINILILEAIENHNLADTVLKITDFGLAR-----EWHKTTKMSA-AGTYAWMAPEVIRLSLFSKSSDVWSFGVLLWELLTGEVPYREIDALAVAYGVAMNKLTLPIPSTCPEPFARLLEECWDPDPHGRPDFGSILKRLEVIEQS 363          
BLAST of CX289871 vs. ExPASy Swiss-Prot
Match: M3K9_MOUSE (Mitogen-activated protein kinase kinase kinase 9 OS=Mus musculus GN=Map3k9 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.011e-30
Identity = 85/232 (36.64%), Postives = 122/232 (52.59%), Query Frame = 3
Query:   27 IQDFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV-IIHRDLKPRNVLLVNS------SADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKET 701
            I++ R E  L   L+HPNI+   G   +   L L+ E+ RGG L++ L  K  + P   VN+A+ IARGM YLH+E  V IIHRDLK  N+L++        S   L++ DFGL++       H   KM+   G+Y +MAPEV +   + K  DV+S+ ++L+E+L GE P    +    A  VA                 +L E CW  D + RPSF  IL +L  I+E+
Sbjct:  178 IENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILEITDFGLAR-----EWHRTTKMSA-AGTYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTSILDQLTTIEES 402          
The following BLAST results are available for this feature:
BLAST of CX289871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HT1_ARATH2.485e-3741.77Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
PYK1_DICDI4.387e-3437.75Dual specificity protein kinase pyk1 OS=Dictyostel... [more]
YTYK2_DICDI5.730e-3440.85Probable tyrosine-protein kinase DDB_G0283397 OS=D... [more]
7TMK1_DICDI8.274e-3340.63Seven transmembrane domain-containing tyrosine-pro... [more]
CTR1_ARATH9.148e-3235.50Serine/threonine-protein kinase CTR1 OS=Arabidopsi... [more]
DRKD_DICDI1.195e-3139.46Probable serine/threonine-protein kinase drkD OS=D... [more]
M3K10_MOUSE2.038e-3137.23Mitogen-activated protein kinase kinase kinase 10 ... [more]
M3K9_HUMAN2.662e-3137.07Mitogen-activated protein kinase kinase kinase 9 O... [more]
M3K10_HUMAN3.476e-3138.05Mitogen-activated protein kinase kinase kinase 10 ... [more]
M3K9_MOUSE1.011e-3036.64Mitogen-activated protein kinase kinase kinase 9 O... [more]

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Properties
Property NameValue
Genbank descriptionC02018A06SK IF1 Citrus clementina cDNA clone C02018A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289871 ID=CX289871; Name=CX289871; organism=Citrus clementina; type=EST; length=726bp
AATTCGGCACGAGGGATAGATTGGTGATTCAGGACTTCAGGCATGAGGTC
AATTTGCTGGTGAAACTTCGCCATCCTAATATAGTCCAATTCCTGGGAGC
GGTCACCGAGAGGAAGCCCCTTATGTTAATTACCGAGTATTTACGAGGGG
GTGATCTTCATAAGTATCTCAAGGAAAAGGGTGCACTTAGTCCTTCAACA
GCTGTTAACTTTGCACTGGACATTGCCAGAGGCATGGCTTATCTTCACAA
TGAACCAAATGTCATAATTCATCGAGACCTGAAGCCAAGGAATGTTCTTC
TGGTCAACTCAAGTGCTGACCACTTGAAAGTTGGAGATTTTGGACTAAGC
AAGCTCATCAAGGTTCAGAATTCTCATGATGTGTACAAAATGACTGGGGA
GACTGGGAGTTACCGGTATATGGCTCCTGAGGTCTTCAAGCACCGGAAAT
ACGACAAGAAGGTTGATGTTTTCTCTTTTGCAATGATACTCTATGAGATG
CTTGAAGGAGAACCACCACTTGCAAATTACGAGCCTTATGAAGCAGCAAA
ATATGTGGCAGAGGGACATAGGCCTTTTTTCCGTGCAAAAGGATTTACAC
CTGAATTGAGAGAGTTAACAGAGAAGTGCTGGGCTGCTGACATGAACCAA
AGACCTTCATTCTTGGATATTCTCAAGAGGCTTGAAAAGATCAAGGAAAC
TTTACCAACAGATCATCATTGGAACA
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