CX289876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289876 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.429e-67 Identity = 123/159 (77.36%), Postives = 131/159 (82.39%), Query Frame = 2 Query: 2 LLFGGHITFFRSILYWIDQXXXXXXXXXXXXXXTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRSHVPIPYEE 478 LL GGHI+ FR+ LYWIDQ TGG+ TPVHTLASGV Y QGIIWEIILTFSLLFTVYATIVDPKKGS+DG GPLLTGFVVGANILAGG FSGASMNPARSFGPALVSG+WTDHWVYWVGPLIGGGLAGFIYE+ I R HVP+ +E Sbjct: 86 LLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLTGFVVGANILAGGAFSGASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFIYENVLIDRPHVPVADDE 244
BLAST of CX289876 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.344e-49 Identity = 97/156 (62.18%), Postives = 114/156 (73.08%), Query Frame = 2 Query: 2 LLFGGHITFFRSILYWIDQXXXXXXXXXXXXXXTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIV-RSHVPI 466 LL GHIT FRS LY Q TGG++TPVHTL SG+G QG++ EIILTFSLLF VYATI+DP+ S+ G GPLLTG +VGAN +AGG FSGASMNPARSFGPAL +G WT HW+YW+GPLIGG LAG +YE F+V R+H P+ Sbjct: 92 LLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPRS-SVPGFGPLLTGLIVGANTIAGGNFSGASMNPARSFGPALATGVWTHHWIYWLGPLIGGPLAGLVYESLFLVKRTHEPL 246
BLAST of CX289876 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.065e-46 Identity = 85/153 (55.56%), Postives = 107/153 (69.93%), Query Frame = 2 Query: 11 GGHITFFRSILYWIDQXXXXXXXXXXXXXXTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRSHVPIP 469 GG+IT R ILYWI Q TGGL+ P L++GVG ++EI++TF L++TVYAT +DPK GS+ + P+ GF+VGANILAGG FSGASMNPA +FGPA+VS WT+HWVYW GPL+GGG+AG IYE FFI +H +P Sbjct: 95 GGNITLLRGILYWIAQLLGSVVACLILKFATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLVGGGIAGLIYEVFFINTTHEQLP 247
BLAST of CX289876 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 1.391e-46 Identity = 87/156 (55.77%), Postives = 110/156 (70.51%), Query Frame = 2 Query: 2 LLFGGHITFFRSILYWIDQXXXXXXXXXXXXXXTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRS-HVPI 466 L GG IT + YWI Q TGGL+ P H++A+G+G +G++ EII+TF+L++TVYAT DPKKGS+ + PL G +VGANILA GPFSG SMNPARSFGPA+ +GD++ HWVYWVGPLIGGGLAG IY + F+ S HVP+ Sbjct: 90 LAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNVFMGSSEHVPL 245
BLAST of CX289876 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 1.816e-46 Identity = 87/159 (54.72%), Postives = 109/159 (68.55%), Query Frame = 2 Query: 2 LLFGGHITFFRSILYWIDQXXXXXXXXXXXXXXTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRSHVPIPYEE 478 L GG+IT YWI Q T GL+ P H +A+G+ FQG++ EII+TF+L++TVYAT DPKKGS+ + P+ GF+VGANILA GPFSG SMNPARSFGPA+V+GD++ +W+YW GPLIGGGLAGFIY FI H P+P E Sbjct: 90 LAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFIYGDVFI-GCHTPLPTSE 247
BLAST of CX289876 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 6.902e-46 Identity = 86/159 (54.09%), Postives = 108/159 (67.92%), Query Frame = 2 Query: 2 LLFGGHITFFRSILYWIDQXXXXXXXXXXXXXXTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRSHVPIPYEE 478 L GG+IT + YWI Q T GLS P H +A+G+ QG++ EII+TF+L++TVYAT DPKKGS+ + P+ GF+VGANILA GPFSG SMNPARSFGPA+ SGD++ +W+YW GPLIGG LAGFIY FI +H P+P E Sbjct: 90 LAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGSLGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGDFSQNWIYWAGPLIGGALAGFIYGDVFIT-AHAPLPTSE 247
BLAST of CX289876 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 9.015e-46 Identity = 86/159 (54.09%), Postives = 108/159 (67.92%), Query Frame = 2 Query: 2 LLFGGHITFFRSILYWIDQXXXXXXXXXXXXXXTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRSHVPIPYEE 478 L GG+IT YWI Q T GL+ P H +A+G+ QG++ EII+TF+L++TVYAT DPKKGS+ + P+ GF+VGANILA GPFSG SMNPARSFGPA+V+GD++ +W+YW GPLIGGGLAGFIY FI H P+P E Sbjct: 90 LAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFIYGDVFI-GCHTPLPTSE 247
BLAST of CX289876 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.474e-45 Identity = 86/156 (55.13%), Postives = 109/156 (69.87%), Query Frame = 2 Query: 2 LLFGGHITFFRSILYWIDQXXXXXXXXXXXXXXTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIV-RSHVPI 466 L+ GHIT R++LY Q +GG+ TPVH L G+ QG++ E+ILTFSLLF YA I+DP+ + +GPLLTG +VGAN LAGG F+GASMNPARSFGPAL +GDWT+HWVYW+GPL+GG LAGF+YE F+V + H P+ Sbjct: 96 LMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPRS-QVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGDWTNHWVYWIGPLLGGPLAGFVYESLFLVQKMHEPL 250
BLAST of CX289876 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 9.967e-45 Identity = 84/159 (52.83%), Postives = 107/159 (67.30%), Query Frame = 2 Query: 2 LLFGGHITFFRSILYWIDQXXXXXXXXXXXXXXTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRSHVPIPYEE 478 L GG IT + YWI Q TG ++TP H L SGVG F+G++ EII+TF L++TVYAT DPKKGS+ + P+ GF+VGANIL GPFSG SMNPARSFGPA+ SGD+T+ W+YWVGPL+GGGLAG +Y + ++ H P+ E Sbjct: 91 LALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTG-VATPTHGL-SGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIWIYWVGPLVGGGLAGLVYRYVYMCGDHAPVASSE 247
BLAST of CX289876 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.302e-44 Identity = 90/160 (56.25%), Postives = 110/160 (68.75%), Query Frame = 2 Query: 14 GHITFFRSILYWIDQXXXXXXXXXXXXXXTGGLS-TPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVR-SHVPIPYEEARF 487 G IT FRS LY Q S PVH L +GVG +G++ E +LTFSLLF VYAT+VDP++ ++ G+GPLL G VVGAN+LAGGPFSGASMNPARSFGPALV+G W DHWVYWVGPLIGG LAG +Y+ F+ + H P+P ++ F Sbjct: 94 GRITLFRSALYVAAQLLGSTLACLLLAFLAVADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRR-AVGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAGVWADHWVYWVGPLIGGPLAGLVYDGLFMAQGGHEPLPRDDTDF 252 The following BLAST results are available for this feature:
BLAST of CX289876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289876 ID=CX289876; Name=CX289876; organism=Citrus clementina; type=EST; length=644bpback to top |