CX289878

Overview
NameCX289878
Unique NameCX289878
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPK8_ARATH (Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.597e-76
Identity = 146/185 (78.92%), Postives = 159/185 (85.95%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQN-IPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREEGLQL 563
            KRAL+V+AE LSVEEVAG+KEAFEMMD+ K GKIN            Q  IP+ DLQILMEAADVDGDG+LNYGEFVAVSVHLKKMANDEHLHKAFSFFD+N+S +IEIEELR ALNDEVDT+ E+V+ AIM DVDTDKDGRISYEEFA MMKAGTDWRKASRQYSRERFNS+SLKLMRE  LQL
Sbjct:  345 KRALRVIAEHLSVEEVAGIKEAFEMMDSKKTGKINLEELKFGLHKLGQQQIPDTDLQILMEAADVDGDGTLNYGEFVAVSVHLKKMANDEHLHKAFSFFDQNQSDYIEIEELREALNDEVDTNSEEVVAAIMQDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMREGSLQL 529          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPK7_ARATH (Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.294e-74
Identity = 142/185 (76.76%), Postives = 156/185 (84.32%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVD-TSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREEGLQL 563
            KRAL+V+AE LSVEE AG+KEAFEMMD NKRGKIN            Q I + DLQILMEA DVDGDG+LNY EFVAVSVHLKKMANDEHLHKAF+FFD+N+SG+IEI+ELR ALNDE+D TS E+VI AIM DVDTDKDGRISYEEF  MMKAGTDWRKASRQYSRERFNS+SLKLMR+  LQL
Sbjct:  347 KRALRVIAEHLSVEEAAGIKEAFEMMDVNKRGKINLEELKYGLQKAGQQIADTDLQILMEATDVDGDGTLNYSEFVAVSVHLKKMANDEHLHKAFNFFDQNQSGYIEIDELREALNDELDNTSSEEVIAAIMQDVDTDKDGRISYEEFVAMMKAGTDWRKASRQYSRERFNSLSLKLMRDGSLQL 531          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPKW_ARATH (Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.298e-62
Identity = 119/184 (64.67%), Postives = 148/184 (80.43%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREEGLQL 563
            KRAL+V+AE LS EE +G++E F++MDT++RGKIN              IP+ DLQILM+A D+D DG L+  EF+A+SVHL+KM NDEHL KAF+FFD+N +G+IEIEELR AL+DE+ TS E+V++AI+ DVDTDKDGRISYEEF  MMK GTDWRKASRQYSRERFNSISLKLM++  LQ+
Sbjct:  351 KRALRVIAEHLSDEEASGIREGFQIMDTSQRGKINIDELKIGLQKLGHAIPQDDLQILMDAGDIDRDGYLDCDEFIAISVHLRKMGNDEHLKKAFAFFDQNNNGYIEIEELREALSDELGTS-EEVVDAIIRDVDTDKDGRISYEEFVTMMKTGTDWRKASRQYSRERFNSISLKLMQDASLQV 533          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPKE_ARATH (Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana GN=CPK14 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.106e-59
Identity = 111/183 (60.66%), Postives = 144/183 (78.69%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREEGLQ 560
            KRAL+V+AE LSVEE + +KE F++MDT+ RGKI               +P+ D+QILM+A DVD DG L+  EFVA+SVH++K+ NDEHL KAF+FFD+N+SG+IEIEELR+AL D+VDT+ E+V+ AI+ DVDT+KDG+ISY+EFA MMK GTDWRKASRQYSR+ F  +SLKLM++  LQ
Sbjct:  342 KRALRVIAEHLSVEETSCIKERFQVMDTSNRGKITITELGIGLQKLGIVVPQDDIQILMDAGDVDKDGYLDVNEFVAISVHIRKLGNDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEEVVEAIILDVDTNKDGKISYDEFATMMKTGTDWRKASRQYSRDLFKCLSLKLMQDGSLQ 524          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPKU_ARATH (Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.046e-52
Identity = 100/184 (54.35%), Postives = 133/184 (72.28%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREEGLQL 563
            K+AL+V+AE LS++EV  ++  F +MD +  GKI+              + E ++++LME ADV+G+G L+YGEFVAV +HL+KM NDEH  +AF FFD++ SG+IE EELR AL DE+      VI  IM +VDTDKDG+I+Y+EF VMMKAGTDWRKASRQYSRERF S+SL LM++  + L
Sbjct:  347 KKALRVIAEHLSIQEVEVIRNMFTLMDDDNDGKISYLELRAGLRKVGSQLGEPEIKLLMEVADVNGNGCLDYGEFVAVIIHLQKMENDEHFRQAFMFFDKDGSGYIESEELREALTDELGEPDNSVIIDIMREVDTDKDGKINYDEFVVMMKAGTDWRKASRQYSRERFKSLSLNLMKDGSMHL 530          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPKD_ARATH (Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 8.730e-51
Identity = 100/186 (53.76%), Postives = 133/186 (71.51%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREEGLQLAN 569
            ++AL+V+AEFLS EEV  +K  F  MDT+  G ++              + E+++Q+L+EA D  G G+L+YGEFVAVS+HL+K+ANDEHL KAFS+FD++ +G+I  +EL +AL ++      DV N I  +VDTDKDGRISYEEFA MMK GTDWRKASR YSR RFNS+S+KLM++  L L N
Sbjct:  342 RKALRVIAEFLSTEEVEDIKVMFNKMDTDNDGIVSIEELKAGLRDFSTQLAESEVQMLIEAVDTKGKGTLDYGEFVAVSLHLQKVANDEHLRKAFSYFDKDGNGYILPQELCDALKEDGGDDCVDVANDIFQEVDTDKDGRISYEEFAAMMKTGTDWRKASRHYSRGRFNSLSIKLMKDGSLNLGN 527          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.646e-49
Identity = 97/184 (52.72%), Postives = 130/184 (70.65%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREEGLQL 563
            K+ L+V+AE LS++EV  +K  F +MD +K GKI               + E ++++LME ADVDG+G L+YGEFVAV +HL+K+ NDE    AF FFD++ S +IE++ELR AL DE+      V++ IM +VDTDKDGRI+Y+EF  MMKAGTDWRKASRQYSRERF S+S+ LM++  L L
Sbjct:  351 KKVLRVIAEHLSIQEVEVIKNMFSLMDDDKDGKITYPELKAGLQKVGSQLGEPEIKMLMEVADVDGNGFLDYGEFVAVIIHLQKIENDELFKLAFMFFDKDGSTYIELDELREALADELGEPDASVLSDIMREVDTDKDGRINYDEFVTMMKAGTDWRKASRQYSRERFKSLSINLMKDGSLHL 534          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPKO_ARATH (Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42
Identity = 85/183 (46.45%), Postives = 126/183 (68.85%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEV--DTSGEDV-INAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREE 551
            K+ L++VA+ L  EE+A + + F+ MDT+K G +             Q +P+ D+++LM+AAD DG+G L+  EFV +S+HLK+M  DEHL +AF +FD+N +GFIE++EL+ AL D+     +G D  I  I  DVD +KDGRIS++EF  MMK+GTDW+ ASRQYSR   N++S+K+ +E+
Sbjct:  354 KKVLRIVADNLPNEEIAAIVQMFQTMDTDKNGHLTFEELRDGLKKIGQVVPDGDVKMLMDAADTDGNGMLSCDEFVTLSIHLKRMGCDEHLQEAFKYFDKNGNGFIELDELKVALCDDKLGHANGNDQWIKDIFFDVDLNKDGRISFDEFKAMMKSGTDWKMASRQYSRALLNALSIKMFKED 536          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPK3_ARATH (Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.548e-31
Identity = 67/154 (43.51%), Postives = 102/154 (66.23%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 473
            K AL+V+AE LS EE+ GLKE F+ +DT+  G +               I EA+++ LMEAAD+DGDGS++Y EF++ ++H+ ++  ++HL+ AF FFD + SG+I +EEL  A+  + +   +  I  I+ +VDTD+DG+I+YEEF  MMK G
Sbjct:  366 KMALKVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRTGLPKLGSKISEAEIRQLMEAADMDGDGSIDYLEFISATMHMNRIEREDHLYTAFQFFDNDNSGYITMEELELAMK-KYNMGDDKSIKEIIAEVDTDRDGKINYEEFVAMMKKG 518          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPKF_ARATH (Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.641e-31
Identity = 69/154 (44.81%), Postives = 100/154 (64.94%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 473
            K AL+V+AE LS EE+ GLK  F  MDT+K G I               + EA+++ LMEAADVDG+G+++Y EF++ ++H  +   DEH+ KAF +FD++ SGFI ++EL +A+  E     E  I  ++ +VDTD DGRI+YEEF  MM++G
Sbjct:  389 KLALKVIAESLSEEEIKGLKTMFANMDTDKSGTITYEELKNGLAKLGSKLTEAEVKQLMEAADVDGNGTIDYIEFISATMHRYRFDRDEHVFKAFQYFDKDNSGFITMDELESAMK-EYGMGDEASIKEVIAEVDTDNDGRINYEEFCAMMRSG 541          
The following BLAST results are available for this feature:
BLAST of CX289878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
CDPK8_ARATH4.597e-7678.92Calcium-dependent protein kinase 8 OS=Arabidopsis ... [more]
CDPK7_ARATH3.294e-7476.76Calcium-dependent protein kinase 7 OS=Arabidopsis ... [more]
CDPKW_ARATH1.298e-6264.67Calcium-dependent protein kinase 32 OS=Arabidopsis... [more]
CDPKE_ARATH5.106e-5960.66Calcium-dependent protein kinase 14 OS=Arabidopsis... [more]
CDPKU_ARATH6.046e-5254.35Calcium-dependent protein kinase 30 OS=Arabidopsis... [more]
CDPKD_ARATH8.730e-5153.76Calcium-dependent protein kinase 13 OS=Arabidopsis... [more]
CDPKA_ARATH1.646e-4952.72Calcium-dependent protein kinase 10 OS=Arabidopsis... [more]
CDPKO_ARATH3.325e-4246.45Calcium-dependent protein kinase 24 OS=Arabidopsis... [more]
CDPK3_ARATH1.548e-3143.51Calcium-dependent protein kinase 3 OS=Arabidopsis ... [more]
CDPKF_ARATH2.641e-3144.81Calcium-dependent protein kinase 15 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC02018B01SK IF1 Citrus clementina cDNA clone C02018B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289878 ID=CX289878; Name=CX289878; organism=Citrus clementina; type=EST; length=722bp
AACAAGCTTAAAAAAGAGCTCTACAAGTTGTGGCTGAGTTTTTGTCTGTG
GAGGAAGTGGCTGGCTTAAAGGAGGCATTTGAGATGATGGACACTAACAA
GAGAGGCAAGATAAACCTTGAGGAGCTAAGGCTTGGGTTGCTAAAAGGTG
GCCAAAATATTCCTGAGGCAGATCTTCAAATCCTCATGGAAGCTGCCGAT
GTTGATGGTGACGGAAGTTTGAATTATGGAGAGTTTGTCGCAGTTTCTGT
TCACCTTAAAAAGATGGCCAATGATGAACATCTGCATAAAGCTTTTTCAT
TCTTTGATCGAAATCGGAGTGGTTTCATAGAGATTGAAGAGCTGAGAAAT
GCCTTAAATGATGAAGTTGACACCAGTGGTGAAGATGTTATCAATGCCAT
TATGCATGATGTTGATACGGACAAGGATGGTCGCATAAGTTACGAGGAGT
TTGCCGTGATGATGAAGGCAGGTACTGATTGGAGAAAGGCGTCAAGGCAA
TATTCACGGGAAAGATTCAACAGTATAAGCTTGAAGTTAATGAGGGAGGA
GGGTTTACAGTTAGCCAACTGAGGGTAAAAGAACTGAAAGTTATCCGACG
GGCTAGCATATCGAGAAATTCACTTCTAAGAAAAAGTAAAATTGTTTTAT
TTTTGTTAAGTTTACACAAGATTATTGTTATTTTATTTATTCTCTGATTT
ATGTCTTTGCATAGGTAGGATT
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