CX289883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289883 vs. ExPASy Swiss-Prot
Match: EMF2_ARATH (Polycomb group protein EMBRYONIC FLOWER 2 OS=Arabidopsis thaliana GN=EMF2 PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 1.605e-29 Identity = 57/97 (58.76%), Postives = 76/97 (78.35%), Query Frame = 1 Query: 64 NMLTKTEVTEDFSCPFCLMQCACFKGLRYHLCSSHDLFNYEFWVTDDYQAVNISVKIDTLTSEIVAGGVDPRLQTFFFCAKP-RSRKRKNLAEHEKQ 351 N L KTEVTEDFSCPFCL++CA FKGLRYHL S+HDL N+EFWVT+++QAVN+S+K +T+ S++ VDP+ QTFFF +K R R++K+ +Q Sbjct: 313 NKLQKTEVTEDFSCPFCLVKCASFKGLRYHLPSTHDLLNFEFWVTEEFQAVNVSLKTETMISKVNEDDVDPKQQTFFFSSKKFRRRRQKSQVRSSRQ 409 HSP 2 Score: 25.0238 bits (53), Expect = 1.605e-29 Identity = 12/20 (60.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 18 RLRPGIVVFNYRDYYQHANK 77 RLR G VVFNYR Y K Sbjct: 298 RLRTGNVVFNYRYYNNKLQK 317
BLAST of CX289883 vs. ExPASy Swiss-Prot
Match: VRN2_ARATH (Polycomb group protein VERNALIZATION 2 OS=Arabidopsis thaliana GN=VRN2 PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 2.789e-25 Identity = 57/126 (45.24%), Postives = 80/126 (63.49%), Query Frame = 1 Query: 64 NMLTKTEVTEDFSCPFCLMQCACFKGLRYHLCSSHDLFNYEFWVTDDYQAVNISVKIDTLTSEIVAGGVDPRLQTFFFCAKPRSRKRKNLAEHEKQVNIQFLELDSPGLPTDDANGEFAAKDDGER 441 N L +TEV ED SCPFC M C FKGL++HL SSHDLF +EF + ++YQ VN+SVK+++ E G D + + F C+KPR R+++ + +++ + FL LDSP L NG A +DG R Sbjct: 77 NTLQRTEVREDCSCPFCSMLCGSFKGLQFHLNSSHDLFEFEFKLLEEYQTVNVSVKLNSFIFE-EEGSDDDKFEPFSLCSKPRKRRQRGGRNNTRRLKVCFLPLDSPSLANGTENG-IALLNDGNR 200 HSP 2 Score: 21.557 bits (44), Expect = 2.789e-25 Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 3 Query: 12 RRRLRPGIVVFNYRD 56 R+ G+VVFNY+D Sbjct: 60 RKSRSTGMVVFNYKD 74
BLAST of CX289883 vs. ExPASy Swiss-Prot
Match: FIS2_ARATH (Polycomb group protein FERTILIZATION-INDEPENDENT SEED 2 OS=Arabidopsis thaliana GN=FIS2 PE=1 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18 Identity = 52/141 (36.88%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 67 MLTKTEVTEDFSCPFCLMQCACFKGLRYHLCSSHDLFNYEFW--VTDDYQAVNISVKIDTLTSEIVAGGV-DPRLQTFFFCAKPRS-RKRKNLAEHEKQVNIQFLELDSPGLPTDDANGEFAAKDDGERDSKLSPSGRKIA 477 M K EV E+FSCPFCL+ C +GL+ HL SSHD F +EF+ D V++SVK DT+ ++ V +P+L FC+K R+ R++++ + + K++N+ +ELD LP N DD + S KI+ Sbjct: 124 MTLKAEVVENFSCPFCLIPCGGHEGLQLHLKSSHDAFKFEFYRAEKDHGPEVDVSVKSDTIKFGVLKDDVGNPQLSPLTFCSKNRNQRRQRDDSNNVKKLNVLLMELDLDDLPRGTENDSTHVNDDNVSSPPRAHSSEKIS 264 The following BLAST results are available for this feature:
BLAST of CX289883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289883 ID=CX289883; Name=CX289883; organism=Citrus clementina; type=EST; length=692bpback to top |