CX289890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289890 vs. ExPASy Swiss-Prot
Match: DCDA1_ARATH (Diaminopimelate decarboxylase 1, chloroplastic OS=Arabidopsis thaliana GN=LYSA1 PE=1 SV=1) HSP 1 Score: 409.453 bits (1051), Expect = 9.137e-114 Identity = 202/221 (91.40%), Postives = 209/221 (94.57%), Query Frame = 3 Query: 24 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVK 686 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGK LEDLVLAAQEGVFVNVDSEFDL NIV ASRI+GK+VNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLD VKAHP ELKLVGAHCHLGSTITKVDIFRDAAVLM+ YID+IR QGFEV YLNIGGGLGIDYYH GAVLP P +LI+TVRELVLSR+LNLIIEPGRSLIANTCC VNHVTGVK Sbjct: 140 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGVK 360
BLAST of CX289890 vs. ExPASy Swiss-Prot
Match: DCDA2_ARATH (Diaminopimelate decarboxylase 2, chloroplastic OS=Arabidopsis thaliana GN=LYSA2 PE=2 SV=1) HSP 1 Score: 406.757 bits (1044), Expect = 5.922e-113 Identity = 201/221 (90.95%), Postives = 208/221 (94.12%), Query Frame = 3 Query: 24 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVK 686 GCGAVLVSGNELRLAL AGFDPTKCIFNGNGK LEDLVLAAQEGVFVNVDSEFDL NIV ASRI+GK+VNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLD VKAHP ELKLVGAHCHLGSTITKVDIFRDAAVLM+ YID+IR QGFEV YLNIGGGLGIDYYH GAVLP P +LI+TVRELVLSR+LNLIIEPGRSLIANTCC VNHVTGVK Sbjct: 145 GCGAVLVSGNELRLALLAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGVK 365
BLAST of CX289890 vs. ExPASy Swiss-Prot
Match: DCDA_ORYSJ (Probable diaminopimelate decarboxylase, chloroplastic OS=Oryza sativa subsp. japonica GN=LYSA PE=2 SV=1) HSP 1 Score: 387.882 bits (995), Expect = 2.847e-107 Identity = 188/227 (82.82%), Postives = 209/227 (92.07%), Query Frame = 3 Query: 6 RIRHEGGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVK 686 ++ E GCGAVLVSGNELRLALRAGFDPT+CIFNGNGK LEDLVLAA+ GVFVN+DSEFDLENIV A+R+AGKKV VLLRINPDVDPQVHPYVATGNK SKFGIRNEKLQWFLD++K++ N++ LVG HCHLGSTITKVDIFRDAA LMVNY+D+IRAQGFE++YLNIGGGLGIDY+HT AVLP P +LI+TVRELVLSR+L LIIEPGRSLIANTCC VN VTGVK Sbjct: 139 QLLRELGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKTLEDLVLAAESGVFVNIDSEFDLENIVTAARVAGKKVPVLLRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYSNDITLVGVHCHLGSTITKVDIFRDAAGLMVNYVDEIRAQGFELEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVLSRDLTLIIEPGRSLIANTCCFVNRVTGVK 365
BLAST of CX289890 vs. ExPASy Swiss-Prot
Match: DCDA_AQUAE (Diaminopimelate decarboxylase OS=Aquifex aeolicus GN=lysA PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.106e-37 Identity = 84/224 (37.50%), Postives = 134/224 (59.82%), Query Frame = 3 Query: 18 EGGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFV-NVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVK 686 E G GA +VSG EL LA +AG P + ++ G GK ++L A + + NV+S +L+ + + GKK + +R+NPDVDP+ HPY+ATG + SKFG+ + Q + N L++VG HCH+GS I + +R+A +V+ + + +GF++ YL+IGGGLGI Y P P++L D +++L+ + +I+EPGRS++ N L+ V +K Sbjct: 78 ELGAGADIVSGGELYLAKKAGIPPERIVYAGVGKTEKELTDAVDSEILMFNVESRQELDVLNEIAGKLGKKARIAIRVNPDVDPKTHPYIATGMQKSKFGVDIREAQKEYEYASKLEN-LEIVGIHCHIGSQILDISPYREAVEKVVSLYESLTQKGFDIKYLDIGGGLGIKYKPEDKE-PAPQDLADLLKDLLENVKAKIILEPGRSIMGNAGILITQVQFLK 299
BLAST of CX289890 vs. ExPASy Swiss-Prot
Match: DCDA_PSEAE (Diaminopimelate decarboxylase OS=Pseudomonas aeruginosa GN=lysA PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36 Identity = 86/227 (37.89%), Postives = 133/227 (58.59%), Query Frame = 3 Query: 24 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFV-NVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVKLMEQK 701 G G +VS EL L AG DP K +F+G GK +D+ A + GV NV+S +LE + + G K V LR+NPDVD Q HPY++TG K +KFGI ++ + + A A + L+++G CH+GS +T+++ F DA ++ +D++ +G + +L++GGGLG+ Y P + I +RE + R+L L+ EPGRS++AN L+ V +K E K Sbjct: 75 GAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVHCFNVESGEELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAE-AVYARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGLGVRYRDEQP--PLAGDYIRAIRERLHGRDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHK 298
BLAST of CX289890 vs. ExPASy Swiss-Prot
Match: DCDA_ARCFU (Diaminopimelate decarboxylase OS=Archaeoglobus fulgidus GN=lysA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.482e-34 Identity = 90/238 (37.82%), Postives = 131/238 (55.04%), Query Frame = 3 Query: 6 RIRHEGGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKL-----VGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTV------RELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVK 686 RI G GA + S EL LA AGF +FNGN K +++ + GV +VDS +L I ++ GK+V + R+NPDVDP+ HP +ATG + SKFGI +E ++ +A+ LKL VG HCH+GS I + F A +++ I G E+ ++++GGGLGIDY GA P P++L + R+ L+ + L +EPGRS++ NT L+ V VK Sbjct: 65 RIIASHGFGADVFSDGELYLASLAGFRKDMVLFNGNSKSRKEIEMGVTAGVKFSVDSLDELRTISKIAKEVGKEVEIAFRVNPDVDPKTHPKIATGLRESKFGIPHEMVR------EAYEMALKLDGVVPVGIHCHIGSQILDLSPFVHALNKVMDIAVDIEKLGVELSFVDMGGGLGIDYEGKGA--PTPKDLASAILPEFEGRKADLTSDPQLWLEPGRSIVGNTTVLITRVNAVK 294
BLAST of CX289890 vs. ExPASy Swiss-Prot
Match: DCDA_NEIMA (Diaminopimelate decarboxylase OS=Neisseria meningitidis serogroup A GN=lysA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.034e-32 Identity = 87/233 (37.34%), Postives = 133/233 (57.08%), Query Frame = 3 Query: 24 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGV-FVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAH------PNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVKLMEQK 701 G G +VSG EL L AG D K IF+G GK ++ A GV N++S +++ I + GK +V LR+NPDVD + HPY++TG K +KFGI + DA++A+ PN LK++G CH+GS +T + +A ++ +D + A+G +++L++GGG+GI Y +P V++L+ +R L LI+EPGRSL+ N L+ V VK E+K Sbjct: 67 GSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIA------YADALEAYRHAAQQPN-LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDED--VPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGALLTRVEFVKYGEEK 290
BLAST of CX289890 vs. ExPASy Swiss-Prot
Match: DCDA_NEIMB (Diaminopimelate decarboxylase OS=Neisseria meningitidis serogroup B GN=lysA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.764e-32 Identity = 88/233 (37.77%), Postives = 132/233 (56.65%), Query Frame = 3 Query: 24 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGV-FVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAH------PNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVKLMEQK 701 G G +VSG EL L AG D K IF+G GK ++ A GV N++S +++ I + GK V LRINPDVD + HPY++TG K +KFGI + DA++A+ PN LK++G CH+GS +T + +A ++ +D + A+G +++L++GGG+GI Y +P V++L+ +R L LI+EPGRSL+ N L+ V VK E+K Sbjct: 67 GSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAPVSLRINPDVDAKTHPYISTGLKANKFGIA------YADALEAYHYAAQQPN-LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEN--VPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEK 290
BLAST of CX289890 vs. ExPASy Swiss-Prot
Match: DCDA_METJA (Diaminopimelate decarboxylase OS=Methanocaldococcus jannaschii GN=lysA PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.752e-32 Identity = 80/229 (34.93%), Postives = 131/229 (57.21%), Query Frame = 3 Query: 24 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFV-NVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKA--HPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLS-----RNLNLIIEPGRSLIANTCCLVNHVTGVK 686 GCGA +VSG EL +A + K +FNGN K E++++ + + NVDS +L I ++ G+ NV RINP+V+P+ HP ++TG K +KFG+ E + A+K + +VG HCH+GS +T + F + +++++ +++ +G E++ +N+GGGLGI YY + P ++L D + +L NLI+EPGRSL+A L+ V +K Sbjct: 88 GCGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVES-GIAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQI-PTQKDLADAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIK 314
BLAST of CX289890 vs. ExPASy Swiss-Prot
Match: DCDA_VIBCH (Diaminopimelate decarboxylase OS=Vibrio cholerae GN=lysA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.673e-31 Identity = 84/228 (36.84%), Postives = 128/228 (56.14%), Query Frame = 3 Query: 24 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGV-FVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRE-LVLSRNLNLIIEPGRSLIANTCCLVNHVTGVKLMEQK 701 G G +VS EL L AG DP+K +F+G GK ++ A Q + NV+SE +L+ + + G K + LRINPDVD + HPY++TG +++KFGI ++ + PN L + G CH+GS +T + F DA ++ ID ++A+G + +L++GGGLG+ Y + P+P + + L R+L LI EPGR++ AN LV V +K E K Sbjct: 76 GSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPN-LDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVY--RDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK 300 The following BLAST results are available for this feature:
BLAST of CX289890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289890 ID=CX289890; Name=CX289890; organism=Citrus clementina; type=EST; length=704bpback to top |