CX289892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289892 vs. ExPASy Swiss-Prot
Match: ODPA_PORYE (Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra yezoensis GN=pdhA PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.016e-57 Identity = 107/183 (58.47%), Postives = 132/183 (72.13%), Query Frame = 1 Query: 1 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKRIXXXXXXXXXXXXXXXPPPRSQLLENVFAD 549 VT FFGDGT NNGQFFECLNMA LWKLPI+FVVENN WAIGM+H R++S P+I+KK AFG+PG VDGMDVL VR+ AK+A++RAR+G+GPTL+E TYRFRGHSLADPDELR EK + ARDPI LKKY++++ +A+ EL I+ + P S+L +FAD Sbjct: 163 VTACFFGDGTTNNGQFFECLNMAVLWKLPIIFVVENNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQAAKQAVQRARQGDGPTLIEALTYRFRGHSLADPDELRSRQEKEAWVARDPIKKLKKYILDNEIANIGELNEIQNAVKTELEQAVKFAISSPEPNMSELKRYLFAD 345
BLAST of CX289892 vs. ExPASy Swiss-Prot
Match: ODPA_PORPU (Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra purpurea GN=pdhA PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.734e-57 Identity = 108/183 (59.02%), Postives = 133/183 (72.68%), Query Frame = 1 Query: 1 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKRIXXXXXXXXXXXXXXXPPPRSQLLENVFAD 549 VT FFGDGT NNGQFFECLNMA LWKLPI+FVVENN WAIGM+H R++S P+I+KK AFG+PG VDGMDVL VR+VA++A+ERAR+G+GPTL+E TYRFRGHSLADPDELR EK + ARDPI LKK+++++ +AS EL I+ + P S+L +FAD Sbjct: 161 VTACFFGDGTTNNGQFFECLNMAVLWKLPIIFVVENNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQVAEKAVERARQGQGPTLIEALTYRFRGHSLADPDELRSRQEKEAWVARDPIKKLKKHILDNQIASSDELNDIQSSVKIDLEQSVEFAMSSPEPNISELKRYLFAD 343
BLAST of CX289892 vs. ExPASy Swiss-Prot
Match: ODPA_RHIME (Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium meliloti GN=pdhA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.440e-37 Identity = 75/156 (48.08%), Postives = 107/156 (68.59%), Query Frame = 1 Query: 1 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELR--DPAEKARYAARDPITALKKYLIESSLASEAELKAIEKRI 462 V+LA+FGDG N GQ +E NMAALWKLP++++VENN +A+G S RA++ ++G +FG+PG+ VDGMDV V+ A EA+E R G+GP ++E TYR+RGHS++DP + R D +K R + DPI +K L + A+E ELK I+K + Sbjct: 166 VSLAYFGDGAANQGQVYESFNMAALWKLPVIYIVENNRYAMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKAAADEAVEHCRSGKGPIILEMLTYRYRGHSMSDPAKYRSKDEVQKMR-SEHDPIEQVKARLTDKGWATEDELKQIDKEV 320
BLAST of CX289892 vs. ExPASy Swiss-Prot
Match: ODPA_RICBR (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia bellii (strain RML369-C) GN=pdhA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.865e-35 Identity = 68/154 (44.16%), Postives = 103/154 (66.88%), Query Frame = 1 Query: 1 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKRI 462 + F GDG N GQ +E NMAALW LP+V+++ENN +++G S R+T +YKKG +FG+ GF ++GMD ++ + K+A E R P ++E +TYR+RGHS++DP + R E Y RDPIT ++K ++E++ ASEA+LK IE+ + Sbjct: 145 ICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVARSTFMRDLYKKGESFGIKGFQLNGMDFEEMYDGVKQAAEYVRENSMPLILEVKTYRYRGHSMSDPAKYRSKEEVETYKERDPITEIRKIILENNYASEADLKEIEQSV 298
BLAST of CX289892 vs. ExPASy Swiss-Prot
Match: ODPA_RICFE (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia felis GN=pdhA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.258e-35 Identity = 66/154 (42.86%), Postives = 102/154 (66.23%), Query Frame = 1 Query: 1 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKRI 462 + F GDG N GQ +E NMAALW LP+V+++ENN +++G S R+T +YKKG +FG+ GF +DGMD ++ AK+A E R P ++E +TYR+RGHS++DP + R E +Y RDP+ ++K ++++ A+EA+LK IE+ + Sbjct: 145 ICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVARSTFMRDLYKKGESFGIKGFQLDGMDFEEMYNGAKQAAEYVRENSFPLILEVKTYRYRGHSMSDPAKYRSKEEVEQYKERDPLVIIRKTILDNKYATEADLKEIEQSV 298
BLAST of CX289892 vs. ExPASy Swiss-Prot
Match: ODPA_RICCN (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia conorii GN=pdhA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.258e-35 Identity = 65/154 (42.21%), Postives = 103/154 (66.88%), Query Frame = 1 Query: 1 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKRI 462 + F GDG N GQ +E NMAALW LP+V+++ENN +++G S R+T +YKKG +FG+ GF +DGMD ++ + +K+A E R P ++E +TYR+RGHS++DP + R E +Y RDP+ ++K ++++ +EA+LKAIE+ + Sbjct: 145 ICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVARSTFMRDLYKKGASFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGHSMSDPAKYRSKEEVEQYKERDPLVIIRKTILDNKYVTEADLKAIEQSV 298
BLAST of CX289892 vs. ExPASy Swiss-Prot
Match: ODPA_RICTY (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia typhi GN=pdhA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.634e-33 Identity = 62/154 (40.26%), Postives = 100/154 (64.94%), Query Frame = 1 Query: 1 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKRI 462 + F GDG N GQ +E NMA+LW LP+V+++ENN +++G S R+T +YKKG +FG+ GF +DGMD ++ K+ E R P ++E +TYR+RGHS++DP + R E A+Y RD + +++ ++++ A+E +LKAIE+ + Sbjct: 145 ICFTFLGDGAVNQGQVYEAFNMASLWGLPVVYIIENNEYSMGTSVSRSTFMRDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDPAKYRSKEEVAKYKERDTLVRIRQIILDNKYATEEDLKAIERSV 298
BLAST of CX289892 vs. ExPASy Swiss-Prot
Match: ODPA_RICPR (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia prowazekii GN=pdhA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.634e-33 Identity = 63/154 (40.91%), Postives = 100/154 (64.94%), Query Frame = 1 Query: 1 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKRI 462 + F GDG N GQ +E NMA+LW LPIV+++ENN +++G S R+T +YKKG +FG+ GF +DGMD ++ K+ E R P ++E +TYR+RGHS++DP + R E +Y RD + +++ ++++ A+EA+LKAIE+ + Sbjct: 145 ICFTFLGDGAVNQGQVYEAFNMASLWGLPIVYIIENNEYSMGTSVARSTFMCDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDPAKYRSKEEVEKYKERDTLVRIREIILDNKYATEADLKAIEQSV 298
BLAST of CX289892 vs. ExPASy Swiss-Prot
Match: ODPA_RAT (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus GN=Pdha1 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 3.293e-32 Identity = 76/192 (39.58%), Postives = 106/192 (55.21%), Query Frame = 1 Query: 1 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD---ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKRIXXXXXXXXXXXXXXXPPPRSQLLENVFADPKGFGI 567 V L +GDG N GQ FE NMAALWKLP +F+ ENN + +G S RA + YK+G +PG VDGMD+L VRE K A R G+GP L+E +TYR+ GHS++DP R+ ++ R + DPI LK ++ S+LAS ELK I+ + PP +L ++++ F + Sbjct: 189 VCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVR-SKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDPPFEV 377
BLAST of CX289892 vs. ExPASy Swiss-Prot
Match: ODPA_MOUSE (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Mus musculus GN=Pdha1 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.293e-32 Identity = 76/192 (39.58%), Postives = 106/192 (55.21%), Query Frame = 1 Query: 1 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD---ELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKRIXXXXXXXXXXXXXXXPPPRSQLLENVFADPKGFGI 567 V L +GDG N GQ FE NMAALWKLP +F+ ENN + +G S RA + YK+G +PG VDGMD+L VRE K A R G+GP L+E +TYR+ GHS++DP R+ ++ R + DPI LK ++ S+LAS ELK I+ + PP +L ++++ F + Sbjct: 189 VCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVR-SKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDPPFEV 377 The following BLAST results are available for this feature:
BLAST of CX289892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289892 ID=CX289892; Name=CX289892; organism=Citrus clementina; type=EST; length=741bpback to top |