CX290058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290058 vs. ExPASy Swiss-Prot
Match: IF5Z_ARATH (Probable eukaryotic translation initiation factor 5-2 OS=Arabidopsis thaliana GN=At1g77840 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.746e-37 Identity = 82/140 (58.57%), Postives = 101/140 (72.14%), Query Frame = 2 Query: 2 EGASASQFKSFLGSLSGTAQ-VMDALFVALFDGIEKGFAKEVTKKKNYLAAAT--QEEGSQMVLLHSLESFCGK-ARPXXXXXXXXXXXXXYDNDLLEEEFILDWYQKGLGGANKNSQVWKNAKPVIEWLQNAESETEED 409 +G+ S KSF+ SLS Q +MDALF ALFDG+ KGFAKEVTKKKNYLAAA QE+GSQM LL+S+ +FCGK YD D++EEE +LDWY+KGL GA+K+S VWKN KP +EWLQ+AESE+EE+ Sbjct: 297 KGSPISALKSFISSLSEPPQDIMDALFNALFDGVGKGFAKEVTKKKNYLAAAATMQEDGSQMHLLNSIGTFCGKNGNEEALKEVALVLKALYDQDIIEEEVVLDWYEKGLTGADKSSPVWKNVKPFVEWLQSAESESEEE 436
BLAST of CX290058 vs. ExPASy Swiss-Prot
Match: IF5_PHAVU (Eukaryotic translation initiation factor 5 OS=Phaseolus vulgaris GN=EIF5 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.171e-33 Identity = 74/137 (54.01%), Postives = 92/137 (67.15%), Query Frame = 2 Query: 2 EGASASQFKSFLGSLSGTAQV-MDALFVALFDGIEKGFAKEVTKKKNYLAAATQEEGSQMVLLHSLESFCGKARPXXXXXXXXXXXXXYDNDLLEEEFILDWYQKGLGGANKNSQVWKNAKPVIEWLQNAESETEED 409 +G AS+ S L +L AQ M AL ALF+G EKGF +E KKKNY AAA EEGSQ++LLH++E FC K YD D+LEEE I+ WYQKGL G NKNS++WKNA+P I+WLQNAESE++E+ Sbjct: 307 KGFGASELLSHLAALPVPAQEKMSALVEALFEGTEKGFGRETLKKKNYFAAAVAEEGSQILLLHAIEEFCCKPNSNALKEVALVLKTLYDADVLEEEAIVLWYQKGLKGDNKNSKIWKNAQPFIDWLQNAESESDEE 443
BLAST of CX290058 vs. ExPASy Swiss-Prot
Match: IF5Y_ARATH (Probable eukaryotic translation initiation factor 5-1 OS=Arabidopsis thaliana GN=At1g36730 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.002e-25 Identity = 71/141 (50.35%), Postives = 86/141 (60.99%), Query Frame = 2 Query: 5 GASASQFKSFLGSLSGTAQV-MDALFVALFDGIEKGFAKEVTKKKNYLAAAT--QEEG---SQMVLLHSLESFCGKARPXXXXXXXXXXXXXYDNDLLEEEFILDWYQKGLGGANKNSQVWKNAKPVIEWLQNAESETEED 409 G+S +Q K+ L S S Q MDALF ALF G KGFAKEV KKK YL A QEE +QM LL+ +ESFC KA YD D+L+E+ I++WY KG+ K+S V KN P IEWLQNAESE+EE+ Sbjct: 303 GSSPTQLKTALASNSANPQEKMDALFSALFGGTGKGFAKEVIKKKKYLLALMMMQEEAGAPAQMGLLNGIESFCMKASAEAAKEVALVIKGLYDEDILDEDVIVEWYNKGV----KSSPVLKNVTPFIEWLQNAESESEEE 439
BLAST of CX290058 vs. ExPASy Swiss-Prot
Match: IF5_MAIZE (Eukaryotic translation initiation factor 5 OS=Zea mays GN=EIF5 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.414e-25 Identity = 63/132 (47.73%), Postives = 82/132 (62.12%), Query Frame = 2 Query: 17 SQFKSFLGSLSGTAQ-VMDALFVALFDGIEKGFAKEVTKKKNYLAAATQEEGSQMVLLHSLESFCGKARPXXXXXXXXXXXXXYDNDLLEEEFILDWYQKGLGGANKNSQVWKNAKPVIEWLQNAESETEED 409 SQ K+ L S + Q VM+A ALF G+ KGF KEV K K YLA A +EG+Q +L+ ++E+F GK P YD D+L+EE I+DWY + A K+SQV KNAKP +EWLQ+AES+ E D Sbjct: 319 SQLKAVLASSTLPPQDVMNAPLEALFGGVGKGFTKEVVKNKKYLAVAVPDEGAQTLLVQAIEAFGGKCNPEALKEVPVVLKALYDGDILDEETIVDWYNDAV-AAGKDSQVVKNAKPFVEWLQSAESDEEGD 449 The following BLAST results are available for this feature:
BLAST of CX290058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290058 ID=CX290058; Name=CX290058; organism=Citrus clementina; type=EST; length=689bpback to top |