CX290068

Overview
NameCX290068
Unique NameCX290068
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX290068 vs. ExPASy Swiss-Prot
Match: RF2A_ORYSJ (Transcription factor RF2a OS=Oryza sativa subsp. japonica GN=RF2a PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11
Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = 1 
Query:  544 IIDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFL 699
            ++DPKR KRI ANRQSA RS+ RK++YI+ELER V TLQTE + LS ++A L
Sbjct:  179 LVDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLALL 230
The following BLAST results are available for this feature:
BLAST of CX290068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RF2A_ORYSJ5.095e-1163.46Transcription factor RF2a OS=Oryza sativa subsp. j... [more]
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Properties
Property NameValue
Genbank descriptionC02020B07SK IF1 Citrus clementina cDNA clone C02020B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290068 ID=CX290068; Name=CX290068; organism=Citrus clementina; type=EST; length=715bp
CAATGCTGCCACCACCATGACCCTTAACACAACAACAATATCCACCACAA
TCAACCCCATTGGGTTGACGAGTTCCTCGACTTCTCCTCCGTCCGACGAG
GGGCGCACCGCCGGTCCATCAGCGACTCCGTCGCCTTCCTCGACCCACCG
TCGTCGTTGGTTGTTGTTGAAGAATGTAGGAATAGTAACAACTCTAATAA
TAACAATAATAATAGCACCATAAATAACATTATGTCATCATCGGACGCCA
ATTACTGCTTTGATAGGCTTGATGATGAGCAACTCATGTCCATGTTCTCC
GACGACATATCGGTGTCGGTCCCGCCTACGGCTTCCTCATCAAACCCTTC
CACGCCGTCTGATCAAAATAGCAACAATGATGAGAAAGTTACTGCACCGT
CGGATCAACAACAACAACAAAAGCAGCAGCAGCAGCAGCCCAAGAATGAG
CCTGGAGAAGTGGAAAGCTCGTGCAAGAATAACGAGCCATCATCATCACA
AACCACCACGCACCAGACGCCTCCTGCCTCTAATGGTGATACCATCATCG
ATCCAAAAAGAGTTAAGAGAATTTTGGCAAATCGGCAATCAGCACAGAGG
TCAAGAGTGAGGAAATTACAATATATTTCAGAGCTTGAACGGAGTGTTAC
AACATTGCAGACTGAAGTATCAGCATTGTCACCGAGGGTTGCATTTTTGG
ATCATCAAAGGTTGA
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