CX290133

Overview
NameCX290133
Unique NameCX290133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP14_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Arabidopsis thaliana GN=TOPP4 PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 5.341e-98
Identity = 153/168 (91.07%), Postives = 163/168 (97.02%), Query Frame = 2
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYKIKYP NFFLLRGNHECASINRIYGFYDECKRRFNVR+WK FTDCFNCLPVAALID+KILCMHGGLSPDL HLD++RNLPRPT +PDTGLLCDLLWSDPG+DVKGWGMNDRGVSYTFGPDKVSEFL +HDLDLVCRAHQVV+
Sbjct:   95 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPGNFFLLRGNHECASINRIYGFYDECKRRFNVRVWKVFTDCFNCLPVAALIDDKILCMHGGLSPDLDHLDEIRNLPRPTMIPDTGLLCDLLWSDPGKDVKGWGMNDRGVSYTFGPDKVSEFLTKHDLDLVCRAHQVVE 262          

HSP 2 Score: 40.0466 bits (92), Expect = 5.341e-98
Identity = 18/23 (78.26%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFADRQLVT+F
Sbjct:  255 CRAHQVVEDGYEFFADRQLVTVF 277          
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP1_ORYSJ (Serine/threonine-protein phosphatase PP1 OS=Oryza sativa subsp. japonica GN=Os03g0268000 PE=2 SV=2)

HSP 1 Score: 336.65 bits (862), Expect = 3.435e-97
Identity = 151/168 (89.88%), Postives = 165/168 (98.21%), Query Frame = 2
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWK FTDCFNCLPVAALID+KILCMHGGLSPDL+HLD++++LPRPT VPDTGLLCDLLWSDPG+DV+GWGMNDRGVSYTFG DKVSEFL++HDLDL+CRAHQVV+
Sbjct:   96 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALIDDKILCMHGGLSPDLTHLDEIKSLPRPTDVPDTGLLCDLLWSDPGKDVQGWGMNDRGVSYTFGADKVSEFLEKHDLDLICRAHQVVE 263          

HSP 2 Score: 40.4318 bits (93), Expect = 3.435e-97
Identity = 19/23 (82.61%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFADRQLVTIF
Sbjct:  256 CRAHQVVEDGYEFFADRQLVTIF 278          
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP13_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 3 OS=Nicotiana tabacum GN=NPP3 PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 1.090e-95
Identity = 154/168 (91.67%), Postives = 164/168 (97.62%), Query Frame = 2
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRG+QSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNV+LWK+FTDCFNCLPVAALIDEKILCMHGGLSPDLS LDQ+RNLPRPTA+PDTGLLCDL  SDPG+DVKGWGMNDRGVSYTFGPDKVSEFL +HDLDLVCRAHQVV+
Sbjct:   82 ANYLFLGDYVDRGRQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVKLWKSFTDCFNCLPVAALIDEKILCMHGGLSPDLSSLDQIRNLPRPTAIPDTGLLCDLQRSDPGKDVKGWGMNDRGVSYTFGPDKVSEFLSKHDLDLVCRAHQVVE 249          

HSP 2 Score: 35.4242 bits (80), Expect = 1.090e-95
Identity = 16/23 (69.57%), Postives = 18/23 (78.26%), Query Frame = 3
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA+ +LVTIF
Sbjct:  242 CRAHQVVEDGYEFFAESELVTIF 264          
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP11_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Nicotiana tabacum GN=NPP1 PE=2 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 5.371e-95
Identity = 150/168 (89.29%), Postives = 163/168 (97.02%), Query Frame = 2
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNV+LWK FT+CFNCLPVAALIDEKILCMHGGLSP L++LDQ+RNLPRPT VPD+GLLCDLLWSDP R+VKGWGMNDRGVSYTFGPDKV+EFL +HD+DLVCRAHQVV+
Sbjct:   96 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVKLWKCFTECFNCLPVAALIDEKILCMHGGLSPVLTNLDQIRNLPRPTDVPDSGLLCDLLWSDPSREVKGWGMNDRGVSYTFGPDKVAEFLMQHDMDLVCRAHQVVE 263          

HSP 2 Score: 38.891 bits (89), Expect = 5.371e-95
Identity = 18/23 (78.26%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA+RQLVTIF
Sbjct:  256 CRAHQVVEDGYEFFAERQLVTIF 278          
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP12_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Nicotiana tabacum GN=NPP2 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 7.670e-94
Identity = 148/168 (88.10%), Postives = 161/168 (95.83%), Query Frame = 2
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWK  TDCFNCLPVAALID+KILCMHGGLSPDL+ LD++RNLPRPT +PD+GLLCDLLWSDP R+VKGWGMNDRGVSYTFG DKV+EFL +HD+DLVCRAHQVV+
Sbjct:   89 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTNTDCFNCLPVAALIDDKILCMHGGLSPDLTDLDEIRNLPRPTDIPDSGLLCDLLWSDPSREVKGWGMNDRGVSYTFGSDKVAEFLMQHDMDLVCRAHQVVE 256          

HSP 2 Score: 38.891 bits (89), Expect = 7.670e-94
Identity = 18/23 (78.26%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA+RQLVTIF
Sbjct:  249 CRAHQVVEDGYEFFAERQLVTIF 271          
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP12_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Arabidopsis thaliana GN=TOPP2 PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 1.198e-91
Identity = 142/168 (84.52%), Postives = 162/168 (96.43%), Query Frame = 2
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF+VRLWK FTD FNCLPVAA+ID+KILCMHGGLSPDL++++Q++N+ RPT VPD+GLLCDLLWSDP +DVKGWGMNDRGVSYTFGPDKV+EFL ++D+DL+CRAHQVV+
Sbjct:   91 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFSVRLWKVFTDSFNCLPVAAVIDDKILCMHGGLSPDLTNVEQIKNIKRPTDVPDSGLLCDLLWSDPSKDVKGWGMNDRGVSYTFGPDKVAEFLIKNDMDLICRAHQVVE 258          

HSP 2 Score: 40.4318 bits (93), Expect = 1.198e-91
Identity = 19/23 (82.61%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFADRQLVTIF
Sbjct:  251 CRAHQVVEDGYEFFADRQLVTIF 273          
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP11_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 1.563e-91
Identity = 142/168 (84.52%), Postives = 160/168 (95.24%), Query Frame = 2
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLA+KIKYPENFF+LRGNHECASINRIYGFYDECKRR+N+RLWK FTDCFNCLPVAA++DEKILCMHGGLSP+L  L+Q+R +PRPT VPDTGLLCDLLW+DP +DV+GWG NDRGVSYTFGPD V+EFL+RHDLDLVCRAHQVV+
Sbjct:   82 ANYLFLGDYVDRGKQSLETICLLLAFKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIRLWKTFTDCFNCLPVAAIVDEKILCMHGGLSPELKTLEQIRRIPRPTDVPDTGLLCDLLWADPDKDVQGWGENDRGVSYTFGPDTVTEFLQRHDLDLVCRAHQVVE 249          

HSP 2 Score: 36.965 bits (84), Expect = 1.563e-91
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 3
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA RQLVT+F
Sbjct:  242 CRAHQVVEDGYEFFAKRQLVTLF 264          
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP15_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 5 OS=Arabidopsis thaliana GN=TOPP5 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 3.796e-90
Identity = 142/168 (84.52%), Postives = 159/168 (94.64%), Query Frame = 2
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNV+LWK FTD FNCLPVAA+IDEKILCMHGGLSP+L +++Q++N+ RPT VPD GLLCDLLWSDP +DVKGWGMNDRGVSYTFG DKV+EFL ++D+DLVCRAHQVV+
Sbjct:   91 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVKLWKVFTDTFNCLPVAAVIDEKILCMHGGLSPELINVEQIKNIERPTDVPDAGLLCDLLWSDPSKDVKGWGMNDRGVSYTFGADKVAEFLIKNDMDLVCRAHQVVE 258          

HSP 2 Score: 39.2762 bits (90), Expect = 3.796e-90
Identity = 18/23 (78.26%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFADRQLVT+F
Sbjct:  251 CRAHQVVEDGYEFFADRQLVTMF 273          
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP13_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 3 OS=Arabidopsis thaliana GN=TOPP3 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 4.951e-90
Identity = 139/168 (82.74%), Postives = 157/168 (93.45%), Query Frame = 2
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQS+ETICLLLAYKIKY ENFFLLRGNHECASINRIYGFYDECK+R++VR+WK FTDCFNCLPVAALIDEKILCMHGGLSP+L HLD++RN+PRP  +PD GLLCDLLWSDP +D++GWG NDRGVSYTFG DKV EFL+ HDLDL+CRAHQVV+
Sbjct:   82 ANYLFLGDYVDRGKQSVETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKKRYSVRVWKIFTDCFNCLPVAALIDEKILCMHGGLSPELKHLDEIRNIPRPADIPDHGLLCDLLWSDPDKDIEGWGENDRGVSYTFGADKVEEFLQTHDLDLICRAHQVVE 249          

HSP 2 Score: 38.5058 bits (88), Expect = 4.951e-90
Identity = 18/23 (78.26%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA+RQLVTIF
Sbjct:  242 CRAHQVVEDGYEFFANRQLVTIF 264          
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP1_MAIZE (Serine/threonine-protein phosphatase PP1 OS=Zea mays GN=PP1 PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 4.952e-90
Identity = 140/168 (83.33%), Postives = 158/168 (94.05%), Query Frame = 2
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYK+KYPENFFLLRGNHECAS+NRIYGFYDECKRRF+V+LWK FTDCFNCLPV+ALIDEKILCMHGGLSP+L+ L+Q+ NL RPT VPDTGLLCDLLWSDP  +  GW +NDRGVS+TFGPDKVSEFL++HDLDL+CRAHQVV+
Sbjct:   82 ANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASVNRIYGFYDECKRRFSVKLWKTFTDCFNCLPVSALIDEKILCMHGGLSPELNKLEQILNLNRPTDVPDTGLLCDLLWSDPSNEATGWAINDRGVSFTFGPDKVSEFLEKHDLDLICRAHQVVE 249          

HSP 2 Score: 38.1206 bits (87), Expect = 4.952e-90
Identity = 18/23 (78.26%), Postives = 18/23 (78.26%), Query Frame = 3
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA RQLVTIF
Sbjct:  242 CRAHQVVEDGYEFFASRQLVTIF 264          
The following BLAST results are available for this feature:
BLAST of CX290133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
PP14_ARATH5.341e-9891.07Serine/threonine-protein phosphatase PP1 isozyme 4... [more]
PP1_ORYSJ3.435e-9789.88Serine/threonine-protein phosphatase PP1 OS=Oryza ... [more]
PP13_TOBAC1.090e-9591.67Serine/threonine-protein phosphatase PP1 isozyme 3... [more]
PP11_TOBAC5.371e-9589.29Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP12_TOBAC7.670e-9488.10Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP12_ARATH1.198e-9184.52Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP11_ACECL1.563e-9184.52Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP15_ARATH3.796e-9084.52Serine/threonine-protein phosphatase PP1 isozyme 5... [more]
PP13_ARATH4.951e-9082.74Serine/threonine-protein phosphatase PP1 isozyme 3... [more]
PP1_MAIZE4.952e-9083.33Serine/threonine-protein phosphatase PP1 OS=Zea ma... [more]

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Properties
Property NameValue
Genbank descriptionC02020G12SK IF1 Citrus clementina cDNA clone C02020G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290133 ID=CX290133; Name=CX290133; organism=Citrus clementina; type=EST; length=673bp
CTAAAGCCATTATTTGTTTTTAGGGGACTATGTTGATCGTGGGAAGCAGA
GTTTGGAAACAATATGCCTTTTGCTTGCCTATAAGATTAAGTATCCGGAG
AACTTTTTTCTTTTACGAGGAAATCATGAATGTGCTTCTATTAATCGGAT
TTATGGATTTTATGATGAGTGCAAGCGACGGTTTAATGTGAGGCTTTGGA
AAGCCTTTACTGATTGTTTCAACTGCCTTCCTGTGGCGGCTCTTATAGAT
GAAAAGATATTGTGCATGCATGGCGGTCTTTCCCCTGATCTCTCACACTT
GGATCAAGTTAGAAATCTACCTCGTCCAACTGCTGTTCCCGACACTGGTT
TGCTCTGTGATTTGCTGTGGTCGGACCCTGGTAGAGATGTCAAGGGATGG
GGAATGAATGACAGAGGAGTTTCATACACATTTGGTCCTGACAAGGTGTC
GGAATTCTTAAAAAGGCATGATTTGGACCTTGTCTGCCGTGCCCATCAGG
TGGTCGACTTTCCTACTCTTTCTTTTTCCATTTTTTTCCTTTTCTTTTGG
TACCGGAGGGCCGGTAAAAATGTTCCGTTAGCTCTTGCAACTTCAATCAT
GATGTGATTTGTTCTAGGTTGTGGAGGATGGGTATGAGTTCTTTGCTGAT
AGGCAACTTGTTACCATATTCTC
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