CX290134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290134 vs. ExPASy Swiss-Prot
Match: FBK77_ARATH (F-box/kelch-repeat protein At3g61590 OS=Arabidopsis thaliana GN=At3g61590 PE=1 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 7.716e-88 Identity = 147/224 (65.62%), Postives = 182/224 (81.25%), Query Frame = 1 Query: 19 AYLPIASIFRAGCVCRRWHEIVSSRRFLWNFSN-VLSQKPWYFMFTSSDEPIGYAYDPILRKWYGIELPCIETSNWFIASSYGLVCFMDNDSRSELYVCNPISKSWKKLEEPPGLKFSDYSALSLS-------VDRVSHRYTVSIVKSKQVTGNFFQWELSIHIYDSDTMMWVTSWKEVLTGWRAGDESIICDGVLYFLIYATGGGAPXNRHGLISFNLSSRSS 666 ++LPIASIFRAG VC+RW+EIVSSRRFL NFSN +SQ+PWYFMFT++D+P GYAYDPI+RKWY +LPCIETSNWF+ASS GLVCFMDND R+++YV NPI+K W+ L EPPG K +DY+A+S S V+R + Y+VSIVKSKQV GNFFQW+LSIH+Y S+TM W T +VL+GWR G+ES+IC+ VLYF+IY+TGG +RHGLI+ NLSS S Sbjct: 53 SFLPIASIFRAGTVCKRWNEIVSSRRFLCNFSNNSVSQRPWYFMFTTTDDPSGYAYDPIIRKWYSFDLPCIETSNWFVASSCGLVCFMDNDCRNKIYVSNPITKQWRTLIEPPGHKSTDYTAMSTSVNRANQAVNRANRSYSVSIVKSKQVPGNFFQWDLSIHLYSSETMTWTTLVNDVLSGWRGGNESVICNNVLYFMIYSTGGS--DHRHGLIASNLSSIGS 274 HSP 2 Score: 35.039 bits (79), Expect = 7.716e-88 Identity = 13/16 (81.25%), Postives = 16/16 (100.00%), Query Frame = 3 Query: 681 KSFIPVPCALTCGRLM 728 +SFIP+PC+LTCGRLM Sbjct: 282 RSFIPMPCSLTCGRLM 297
BLAST of CX290134 vs. ExPASy Swiss-Prot
Match: FBX6_ARATH (F-box only protein 6 OS=Arabidopsis thaliana GN=FBX6 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.098e-15 Identity = 52/168 (30.95%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 25 LPIASIFRAGCVCRRWHEIVSSRRFLWNFSNVLSQKPWYFMFTSSDEPIGYAYDPILRKWYGIELPCIETSNWFI--ASSYGLVCFMDNDSRSELYVCNPISKSWKKLEEPPGLKFSDYS----ALSLSVDRVSHRYTVSIVKSKQVTGNFFQWELSIHIYDSDTMMW 510 LP+A+ F+ VCR+W+ ++ S F F+ + PW++ T + G YDP L+KW+ +P + + + AS+ GLVCF+D R+ YV NP++KS+++L P F +S ++L+ + SH Y V V E +YDS + +W Sbjct: 132 LPMATFFQFRAVCRKWNALIDSDSFSRCFTELPQTIPWFYTITHENVNSGQVYDPSLKKWHHPIIPALPKKSIVLPMASAGGLVCFLDIGHRN-FYVSNPLTKSFREL---PARSFKVWSRVAVGMTLNGNSTSHGYKVLWVGC----------EGEYEVYDSLSNVW 285
BLAST of CX290134 vs. ExPASy Swiss-Prot
Match: FK111_ARATH (F-box/kelch-repeat protein At5g15710 OS=Arabidopsis thaliana GN=At5g15710 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.076e-11 Identity = 51/168 (30.36%), Postives = 76/168 (45.24%), Query Frame = 1 Query: 19 AYLPIASIFRAGCVCRRWHEIVSSRRFLWNFSNVLSQKPWYFMF--TSSDEPIGYAYDPILRKWYGIELPCIET-SNWFIASSYGLVCFMDNDSRS-ELYVCNPISKSWKKLEEPPGLKFSDYSALSLSVDRVSHRYTVSIVKSKQVTGNFFQWELSIHIYDSDTMMW 510 A +P IFR VC++W+ I+ FL SNV S P F S P + L+ WY I + + W + SS GLVCF D + VCNP+ +SW+ L P + ++ L + VDR + ++ + + G+ L +YDS T W Sbjct: 117 ARVPPFMIFRIRSVCKKWNLILQDNSFLKFHSNVSSHGPCLLTFWKNSPQIPQCSVFSLPLKTWYKIPFTFLPPWAFWLVGSSGGLVCFSGLDGLTFRTLVCNPLMQSWRTL---PSMHYNQQRQLIMVVDRSDKSF--KVIATSDIYGD---KSLPTEVYDSKTDKW 276 The following BLAST results are available for this feature:
BLAST of CX290134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290134 ID=CX290134; Name=CX290134; organism=Citrus clementina; type=EST; length=732bpback to top |