CX290199

Overview
NameCX290199
Unique NameCX290199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290199 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.776e-52
Identity = 104/224 (46.43%), Postives = 150/224 (66.96%), Query Frame = 3
Query:   66 KVHAVCIPSPFQSHIXXXXXXXXXXXXXGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESPTAQDAYSLGENIINNVLLHPFLDLLAKLNDSSNSVNPAVSCIISDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFPVKDKSCLTKEYL-NSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATEMHPKLS 734
            K H VC+P P Q HI             GF++TFVNT +NH R L++RG ++LDGLPSFRFE+I DGLP +  +    QD  +L E+ + N L  PF +LL ++N   N   P VSCI+SDG + FT+  A++LG+P VLF+T S C+F+ +  F  F EKGL P+KD+S LTKEYL +++ID+IP MK+++++D+PSFI++T+P D+M +  +  TE   + S
Sbjct:   11 KPHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRGSNALDGLPSFRFESIADGLPET--DMDATQDITALCESTMKNCLA-PFRELLQRINAGDNV--PPVSCIVSDGCMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESYLTKEYLEDTVIDFIPTMKNVKLKDIPSFIRTTNPDDVMISFALRETERAKRAS 229          
BLAST of CX290199 vs. ExPASy Swiss-Prot
Match: HMNGT_SORBI (Cyanohydrin beta-glucosyltransferase OS=Sorghum bicolor GN=UGT85B1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.911e-33
Identity = 77/221 (34.84%), Postives = 121/221 (54.75%), Query Frame = 3
Query:   72 HAVCIPSPFQSHIXXXXXXXXXXXXXGFHITFVNTEFNHRRLLKARGQHSL----DGLPSFRFEAIPDGLPASSDESPTAQDAYSLGENIINNVLLHPFLDLLAKLNDSSNSVN-PAVSCIISDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFPVKDKSCLT-KEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATE 716
            H V +P P Q H+             G  +TFV T++N+RRLL+A+G+ ++         FR E I DGL  S  ++       SL +N      LHPF  LL +L       + P V+C++ D  + F   AA++ G+P V FFT SAC  +G+  +    E+GL P +D S L   +YL++ ++W+PGM  +R+RD+P+F ++TDP D+M +  ++  E
Sbjct:   12 HVVLVPFPGQGHVAPLMQLARLLHARGARVTFVYTQYNYRRLLRAKGEAAVRPPATSSARFRIEVIDDGLSLSVPQNDVGGLVDSLRKNC-----LHPFRALLRRLGQEVEGQDAPPVTCVVGDVVMTFAAAAAREAGIPEVQFFTASACGLLGYLHYGELVERGLVPFRDASLLADDDYLDTPLEWVPGMSHMRLRDMPTFCRTTDPDDVMVSATLQQME 227          
The following BLAST results are available for this feature:
BLAST of CX290199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
COGT2_ARATH4.776e-5246.43Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
HMNGT_SORBI2.911e-3334.84Cyanohydrin beta-glucosyltransferase OS=Sorghum bi... [more]
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Properties
Property NameValue
Genbank descriptionC02021E11SK IF1 Citrus clementina cDNA clone C02021E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290199 ID=CX290199; Name=CX290199; organism=Citrus clementina; type=EST; length=734bp
TTCGGCACGAGGGAGGCCTACAGAGAGAAGAGATCAAGATGGAATCAAAA
CCTAAAGCTTGTAGCAAGGTTCATGCGGTCTGCATCCCGAGCCCCTTTCA
AAGCCACATAAAAGCAATGCTTAAACTGGCAAAGCTTCTTCATCACAAAG
GTTTTCACATAACTTTTGTCAACACAGAGTTCAATCACAGACGCTTACTC
AAAGCAAGAGGCCAACATTCTTTAGATGGCTTGCCCAGTTTTCGATTCGA
AGCAATCCCAGATGGGCTTCCAGCTTCTTCAGATGAAAGCCCCACTGCTC
AAGACGCGTATTCTCTCGGTGAAAACATCATAAATAATGTCTTGTTGCAT
CCATTTCTTGACCTGCTTGCCAAACTCAATGATTCTTCAAATAGCGTTAA
TCCTGCTGTCAGCTGCATCATCTCAGATGGCTTCTTGCCTTTCACCATAA
CAGCTGCTCAACAACTCGGACTTCCTATTGTATTGTTTTTTACCATCTCC
GCTTGTAGTTTCATGGGATTTAAACAATTTCAGACATTCAAAGAAAAGGG
TCTTTTCCCAGTCAAAGACAAAAGCTGTCTTACGAAAGAGTACTTGAACA
GTCTTATAGACTGGATTCCAGGGATGAAGGATATCCGAATTAGAGATCTT
CCAAGTTTTATTCAATCGACAGATCCGAAAGATATGATGTTCAACTTGTG
CGTGGAAGCAACCGAAATGCATCCAAAGCTCAGC
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