CX290230

Overview
NameCX290230
Unique NameCX290230
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig273 contig Ccv1_Contig273:1..681. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290230 vs. ExPASy Swiss-Prot
Match: RFS5_ARATH (Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1)

HSP 1 Score: 435.647 bits (1119), Expect = 1.112e-121
Identity = 194/226 (85.84%), Postives = 208/226 (92.04%), Query Frame = 3
Query:    3 LLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWN 680
            +LE+LC+ YGGRVDLAKAY+KALT+SV KHF GNGVIASMEHCNDFM LGTEAI+LGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFI PDWDMFQSTHPCAEFHAASRAISGGPIY+SDCVGKH+F LLKRL +P+GSILRCEYYALPTRD LF DPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCRE RRN C S+    +TA T+P D+EWN
Sbjct:  417 ILEMLCQKYGGRVDLAKAYFKALTSSVNKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGPIYISDCVGKHDFDLLKRLVLPNGSILRCEYYALPTRDRLFEDPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCRETRRNQCFSECVNTLTATTSPKDVEWN 642          
BLAST of CX290230 vs. ExPASy Swiss-Prot
Match: RFS_PEA (Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1)

HSP 1 Score: 424.861 bits (1091), Expect = 1.963e-118
Identity = 189/225 (84.00%), Postives = 202/225 (89.78%), Query Frame = 3
Query:    3 LLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEW 677
            LLE+L E YGGRV+LAKAYYKALT+SV KHFKGNGVIASMEHCNDF LLGTEAI+LGRVGDDFWC DPSGDPNGT+WLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGP+YVSDCVG HNF LLK   +PDGSILRC++YALPTRDCLF DPLH+GKTMLKIWNLNKY GV+G FNCQGGGWC E RRN  AS+FS  VT   +P DIEW
Sbjct:  430 LLELLSEEYGGRVELAKAYYKALTSSVNKHFKGNGVIASMEHCNDFFLLGTEAISLGRVGDDFWCCDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPVYVSDCVGNHNFKLLKSFVLPDGSILRCQHYALPTRDCLFEDPLHNGKTMLKIWNLNKYAGVLGLFNCQGGGWCPETRRNKSASEFSHAVTCYASPEDIEW 654          
BLAST of CX290230 vs. ExPASy Swiss-Prot
Match: RFS_ORYSJ (Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 3.701e-117
Identity = 185/226 (81.86%), Postives = 208/226 (92.04%), Query Frame = 3
Query:    3 LLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWN 680
            LLE++CE YGGRV+LAKAY+  LT SVR+HF GNGVIASMEHCNDFMLLGTEA+ALGRVGDDFWCTDPSGDP+GTFWLQGCHMVHCAYNSLWMG FIHPDWDMFQSTHPCA FHAASRA+SGGP+YVSD VG H+F LL+RL++PDG+ILRCE YALPTRDCLFADPLHDGKTMLKIWN+NK++GV+GAFNCQGGGW REARRN CA+ FS  VTA+ +P D+EW+
Sbjct:  415 LLEMVCEEYGGRVELAKAYFAGLTESVRRHFNGNGVIASMEHCNDFMLLGTEAVALGRVGDDFWCTDPSGDPDGTFWLQGCHMVHCAYNSLWMGAFIHPDWDMFQSTHPCAAFHAASRAVSGGPVYVSDAVGCHDFDLLRRLALPDGTILRCERYALPTRDCLFADPLHDGKTMLKIWNVNKFSGVLGAFNCQGGGWSREARRNMCAAGFSVPVTARASPADVEWS 640          
BLAST of CX290230 vs. ExPASy Swiss-Prot
Match: STSYN_PEA (Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.677e-85
Identity = 139/225 (61.78%), Postives = 171/225 (76.00%), Query Frame = 3
Query:    6 LEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWN 680
            LE +C+ YGGRVDLAK YY+ LT S+ K+F GNG+IASM+HCNDF  LGT+ I++GRVGDDFW  DP+GDP G+FWLQG HM+HC+YNSLWMG  I PDWDMFQS H CA+FHA SRAI GGPIYVSD VG H+F L+K+L  PDG+I +C Y+ LPTRDCLF +PL D  T+LKIWN NKY GVIGAFNCQG GW    ++     +  + +    +  ++EW+
Sbjct:  486 LEYVCDEYGGRVDLAKVYYEGLTKSIVKNFNGNGMIASMQHCNDFFFLGTKQISMGRVGDDFWFQDPNGDPMGSFWLQGVHMIHCSYNSLWMGQMIQPDWDMFQSDHVCAKFHAGSRAICGGPIYVSDNVGSHDFDLIKKLVFPDGTIPKCIYFPLPTRDCLFKNPLFDHTTVLKIWNFNKYGGVIGAFNCQGAGWDPIMQKFRGFPECYKPIPGTVHVTEVEWD 710          
BLAST of CX290230 vs. ExPASy Swiss-Prot
Match: RFS4_ARATH (Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 3.387e-78
Identity = 134/227 (59.03%), Postives = 167/227 (73.57%), Query Frame = 3
Query:    6 LEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGK--HNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWN 680
            LE L E +GGRV+LAKAYY  LT S+ K+F G  VIASM+ CN+F  L T+ I++GRVGDDFW  DP GDP G +WLQG HM+HC+YNS+WMG  I PDWDMFQS H CAE+HAASRAI GGP+Y+SD +GK  HNF L+K+L+  DG+I RC +YALPTRD LF +PL D +++LKI+N NK+ GVIG FNCQG GW  E  R     +    V+   + +DIEW+
Sbjct:  502 LESLAEEHGGRVELAKAYYDGLTESMIKNFNGTDVIASMQQCNEFFFLATKQISIGRVGDDFWWQDPYGDPQGVYWLQGVHMIHCSYNSIWMGQMIQPDWDMFQSDHVCAEYHAASRAICGGPVYLSDHLGKASHNFDLIKKLAFFDGTIPRCVHYALPTRDSLFKNPLFDKESILKIFNFNKFGGVIGTFNCQGAGWSPEEHRFKGYKECYTTVSGTVHVSDIEWD 728          
BLAST of CX290230 vs. ExPASy Swiss-Prot
Match: RFS6_ARATH (Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 4.304e-57
Identity = 107/223 (47.98%), Postives = 140/223 (62.78%), Query Frame = 3
Query:    3 LLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDI 671
            +LE L    GGRV+L + +++AL +SV K+F  NG IA M H  D +    +A  + R  DDF+  DP             H+   AYNS+++G F+ PDWDMF S HP AE+HA++RAISGGP+YVSD  GKHNF LL++L +PDGSILR      PTRDCLFADP  DG ++LKIWN+NKYTGV+G +NCQG  W    R+N      +  +T      D+
Sbjct:  387 VLETLGGGLGGRVELTRQFHQALDSSVAKNFPDNGCIACMSHNTDALYCSKQAAVI-RASDDFYPRDPVSHT--------IHIASVAYNSVFLGEFMQPDWDMFHSVHPAAEYHASARAISGGPLYVSDSPGKHNFELLRKLVLPDGSILRARLPGRPTRDCLFADPARDGVSLLKIWNMNKYTGVLGVYNCQGAAWSSTERKNIFHQTKTDSLTGSIRGRDV 600          
BLAST of CX290230 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 6.215e-56
Identity = 105/225 (46.67%), Postives = 143/225 (63.56%), Query Frame = 3
Query:    3 LLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEW 677
            +LE L   +GGRV LAK Y++AL AS+ ++F  NG+I+ M H  D  L   +  A+ R  DDFW  DP+            H+   AYN+L++G F+ PDWDMF S HP AE+HAA+RA+ G  IYVSD  G+H+F LL++L + DGSILR +    PT DC F+DP+ D K++LKIWNLN++TGVIG FNCQG GWC+  +R     Q    ++     ND+ +
Sbjct:  393 ILETLGAGHGGRVKLAKKYHQALEASISRNFPDNGIISCMSHNTDG-LYSAKKTAVIRASDDFWPRDPASHT--------IHIASVAYNTLFLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCAIYVSDKPGQHDFNLLRKLVLRDGSILRAKLPGRPTSDCFFSDPVRDNKSLLKIWNLNEFTGVIGVFNCQGAGWCKNEKRYLIHDQEPGTISGCVRTNDVHY 608          
BLAST of CX290230 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 8.117e-56
Identity = 104/224 (46.43%), Postives = 141/224 (62.95%), Query Frame = 3
Query:    3 LLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIE 674
            ++E L    GGRV L ++Y +AL AS+ ++F  NG I+ M H  D  L   +  A+ R  DDF+  DP+            H+   AYNSL++G F+ PDWDMF S HP AE+HAA+RA+ G  IYVSD  G HNF LL++L +PDGS+LR +    PTRDCLFADP  DG ++LKIWN+NK+TG++G FNCQG GWC+E ++N         +T     +D +
Sbjct:  389 IIETLGAGLGGRVSLTRSYQQALEASIARNFTDNGCISCMCHNTDG-LYSAKQTAIVRASDDFYPRDPASHT--------IHIASVAYNSLFLGEFMQPDWDMFHSLHPTAEYHAAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAKLPGRPTRDCLFADPARDGISLLKIWNMNKFTGIVGVFNCQGAGWCKETKKNQIHDTSPGTLTGSIRADDAD 603          
BLAST of CX290230 vs. ExPASy Swiss-Prot
Match: AGAL_SULSO (Alpha-galactosidase OS=Sulfolobus solfataricus GN=galS PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.161e-16
Identity = 48/123 (39.02%), Postives = 69/123 (56.10%), Query Frame = 3
Query:  228 FWLQGC--HMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSD-CVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVIGAFNCQGG 587
            FW  G   H++  AYNSL   + ++PD+DMF S  P A+ H  +R  SGGPIY++D    + N  LL+   +P+G ++R +  AL T D LF DPL + + +LK+    K    I  FN   G
Sbjct:  429 FWKDGTKLHIMFNAYNSLLTSHIVYPDYDMFMSYDPYAKVHLVARVFSGGPIYITDRHPERTNIELLRMAVLPNGEVIRVDEPALITEDLLFKDPLRE-RVLLKLKGKVKGYNAIAFFNLNSG 550          
The following BLAST results are available for this feature:
BLAST of CX290230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
RFS5_ARATH1.112e-12185.84Probable galactinol--sucrose galactosyltransferase... [more]
RFS_PEA1.963e-11884.00Galactinol--sucrose galactosyltransferase OS=Pisum... [more]
RFS_ORYSJ3.701e-11781.86Galactinol--sucrose galactosyltransferase OS=Oryza... [more]
STSYN_PEA1.677e-8561.78Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 S... [more]
RFS4_ARATH3.387e-7859.03Probable galactinol--sucrose galactosyltransferase... [more]
RFS6_ARATH4.304e-5747.98Probable galactinol--sucrose galactosyltransferase... [more]
RFS1_ARATH6.215e-5646.67Probable galactinol--sucrose galactosyltransferase... [more]
RFS2_ARATH8.117e-5646.43Probable galactinol--sucrose galactosyltransferase... [more]
AGAL_SULSO2.161e-1639.02Alpha-galactosidase OS=Sulfolobus solfataricus GN=... [more]
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Properties
Property NameValue
Genbank descriptionC02021H08SK IF1 Citrus clementina cDNA clone C02021H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290230 ID=CX290230; Name=CX290230; organism=Citrus clementina; type=EST; length=681bp
ATTTGCTGGAGATATTGTGTGAGAATTATGGAGGAAGGGTGGACTTGGCA
AAAGCATATTACAAGGCATTAACAGCTTCTGTAAGGAAGCACTTCAAGGG
CAATGGTGTAATTGCCAGCATGGAGCACTGCAACGATTTTATGTTACTTG
GGACAGAGGCCATAGCTCTTGGTCGCGTTGGTGATGATTTTTGGTGCACT
GACCCATCTGGTGATCCAAATGGTACATTTTGGCTCCAAGGTTGTCACAT
GGTGCATTGTGCATACAACAGCTTATGGATGGGCAACTTCATTCACCCAG
ATTGGGACATGTTCCAATCTACTCACCCTTGTGCCGAGTTCCATGCTGCT
TCTAGGGCAATTTCCGGCGGTCCTATTTACGTTTCCGACTGTGTCGGAAA
ACACAACTTCCCGCTGCTCAAGCGCTTGTCGATGCCTGATGGGTCTATTC
TCCGGTGCGAATACTACGCACTTCCGACTAGAGACTGCCTCTTTGCTGAC
CCTCTCCATGATGGCAAGACCATGCTCAAAATCTGGAACCTGAACAAGTA
CACTGGAGTTATTGGGGCATTTAACTGCCAAGGAGGAGGCTGGTGCAGGG
AAGCCCGACGCAACACATGTGCCTCACAATTTTCACAAAAGGTGACAGCC
AAGACCAACCCAAACGACATTGAATGGAACA
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