CX290243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 7.414e-72 Identity = 137/215 (63.72%), Postives = 169/215 (78.60%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHHDY-----AYHVQPIQPNLQERI 648 GRGKIEIKRIEN+SNRQVTYSKRRNGI+KKAKEITVLCDAKVSLII+ +SGKMH+YCSPST+L D+L+ Y + SGRRLWD KHENLSNEI+RIK+END MQ+KLRHL GEDI+SLN KEL+ LE+ L NGL SI KQSE + +RKN +++EEEH L++ L Q+E+A + M E+ +QR+ ++Y A VQP+QPNL ER+ Sbjct: 2 GRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTSGRRLWDAKHENLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQSEILRMVRKNDQILEEEHKQLQYALHQKEMAAMGGNMRM----IEEVYHQRDRDYEYQQMPFALRVQPMQPNLHERM 212
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 4.068e-70 Identity = 136/213 (63.85%), Postives = 170/213 (79.81%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHHD----YAYHVQPIQPNLQER 645 GRGKIEIKRIEN+SNRQVTYSKRRNGILKKAKEI+VLCDA+VS+II+ASSGKMH++ S TSLVDIL+QYH+ +GRRLWD KHENL NEI ++K++ND MQI+LRHL GEDI+SLN +EL+ LEDAL+NGL SIR+KQ++ + MRK + MEEE + L + LRQ EIA + + E+ +QREN + +A+ VQP+QPNLQER Sbjct: 2 GRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSS--TSLVDILDQYHKLTGRRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNKQNDLLRMMRKKTQSMEEEQDQLNWQLRQLEIASMNRNM----GEIGEVFHQRENEYQTQMPFAFRVQPMQPNLQER 208
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 5.313e-70 Identity = 131/213 (61.50%), Postives = 167/213 (78.40%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQR----ENHHDYAYHVQPIQPNLQER 645 GRGKIEIKRIEN+SNRQVTYSKRRNGI+KKAKEI+VLCDA VS+II+ASSGKMH++CSPST+LVD+L+ YH+ SG+RLWDPKHE+L NEI R+K+END MQI+LRHL GEDI++LN KEL+ LEDALENG ++++KQ E + MRK+ +M+EEE+ L+F LRQ + + +V +Q E +A+ VQP+QPNLQER Sbjct: 2 GRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHKLSGKRLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNKQMEFVRMMRKHNEMVEEENQSLQFKLRQMHLDPMNDNVMESQAVYDHHHHQNIADYEAQMPFAFRVQPMQPNLQER 214
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.019e-69 Identity = 135/211 (63.98%), Postives = 168/211 (79.62%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEID-YQRENHHDYAYHVQPIQPNLQERI 648 GRGKIEIKRIEN+SNRQVTYSKRRNGILKKAKEI+VLCDA+VS+II+ASSGKMH++ S TSLVDIL+QYH+ +GRRL D KHENL NEI ++K++ND MQI+LRHL GEDI+SLN +EL+ LEDALENGL SIR+KQ+E + MRK + MEEE + L LRQ EIA + + V + + + +NH +A+ VQP+QPNLQER+ Sbjct: 2 GRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSS--TSLVDILDQYHKLTGRRLLDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSIRNKQNEVLRMMRKKTQSMEEEQDQLNCQLRQLEIATMNRNMGEIGEVFQQRENHDYQNHMPFAFRVQPMQPNLQERL 210
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.956e-64 Identity = 126/210 (60.00%), Postives = 157/210 (74.76%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHHDYAYHVQPIQPNLQERI 648 GRGKIEIKRIENA+NR VT+SKRRNG++KKAKEITVLCDAKV+LII+AS+GKM DYC PS L +L+QY + SG++LWD KHENLSNEI+RIK+END +Q++LRHL GEDI SLN K L+A+E A+E+GL +RD Q E + + R+N KMM EE L F L+QQE+A M R++ + Y VQPIQPNLQE+I Sbjct: 2 GRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVRDHQMEILISKRRNEKMMAEEQRQLTFQLQQQEMAIASNARGM---------MMRDHDGQFGYRVQPIQPNLQEKI 202
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.985e-60 Identity = 115/208 (55.29%), Postives = 155/208 (74.52%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHHDYAYHVQPIQPNLQE 642 GRGKIEIKRIEN++NRQVT+SKRR+GILKKA+EI+VLCDA+V ++I++S+GK++DYCSP TSL ILE+Y SG+ LWD KH++LS EI+RIK+END MQI+LRHL GED++SL PKELI +E+AL+NG+V++ DK + E + KM+E+E+ L F L QQ+IA +E + D+ + + VQP PNLQE Sbjct: 2 GRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLLAFKLHQQDIALSGSMRDLELGYHPDRDFAAQ--MPITFRVQPSHPNLQE 207
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 217.624 bits (553), Expect = 5.703e-56 Identity = 115/222 (51.80%), Postives = 155/222 (69.82%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLV-----DILEQYHRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHHD---------YAYHVQPIQPNLQE 642 GRGKIEIKRIEN++NRQVT+SKRR GILKKA+EI VLCDA+V ++I++S+GK+ DYC+P T+ V ILE+Y SG+ LWD KH++LS EI+R+K+END MQI+LRH+ GED++SL PKELIA+E+AL NG ++RDK + ++N KM+E+EH L F + QQE+ EL+ E+ Y HHD + + VQP PNLQ+ Sbjct: 2 GRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDKMMDHWRMHKRNEKMLEDEHKMLAFRVHQQEV-----ELS-GGIRELELGY----HHDDRDFAASMPFTFRVQPSHPNLQQ 213
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.387e-40 Identity = 90/224 (40.18%), Postives = 147/224 (65.62%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLKFVLRQQEIARQ-QQELAME-----------NSVSAEIDYQRENHHDYAYHVQPIQPNLQE 642 GRGKIEIKRIEN +NRQVT+SKRR G+LKKA E++VLCDA++ LII++SSGK+ +Y S S+S+ I+E+Y + SG R+ + +++L E+ R+K EN+++Q +R + GED++SL EL L LE+ +R +++ +++E +R+ +++E+++++L +L +Q+ A + QE +E + +A HH A+ +QP QPNLQE Sbjct: 2 GRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKVSGARITEYDNQHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLTMTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHLCRLLAEQQAAVEGVQEPLLEFGVFCPPPDNKTAAAANAGPLHLGHHLPAFRLQPTQPNLQE 225
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 8.562e-36 Identity = 82/210 (39.05%), Postives = 127/210 (60.48%), Query Frame = 1 Query: 19 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKMETMRKNGKMMEEEHNYLKFVLRQQEIA-RQQQELAMENSVSAEID---YQRENHHDYAYHVQPIQPNL 636 GRGKIEIKRIENA+NRQVTYSKRR GI+KKA+E+TVLCDA+V++I+++S+GK H++CSPST + I ++Y + G LW ++EN+ + +K N ++ ++R GED+ L EL LE ++ L +R ++ + T + K + +H+Y + QQE+ R++ ++ D +A+ V P QPNL Sbjct: 2 GRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYK-KKVKHSYEAYETLQQELGLREEPAFGFVDNTGGGWDGGAGAGAAADMFAFRVVPSQPNL 210
BLAST of CX290243 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.136e-34 Identity = 81/212 (38.21%), Postives = 130/212 (61.32%), Query Frame = 1 Query: 22 RGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQ----SEKMETMRKNGKMMEEEHN--YLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHHDYAYHVQP--IQPN 633 RGKI+IKRIEN +NRQVTYSKRRNG+ KKA E+TVLCDAKVS+I+ +S+GK+H++ SPS + + + Y + G LW+ +E + ++ ++K N ++ ++R GE ++ LN ++L L + ++N L IR+++ ++ET +K + +EE H L+F RQ++ ++ NSV + + H A +QP QPN Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQKTVGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKKVRNVEEIHRNLLLEFDARQEDPYGLVEQEGDYNSV---LGFPNGGHRILALRLQPNHHQPN 211 The following BLAST results are available for this feature:
BLAST of CX290243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290243 ID=CX290243; Name=CX290243; organism=Citrus clementina; type=EST; length=750bpback to top |