CX290286

Overview
NameCX290286
Unique NameCX290286
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290286 vs. ExPASy Swiss-Prot
Match: UGPA_MUSAC (UTP--glucose-1-phosphate uridylyltransferase OS=Musa acuminata GN=UGPA PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.190e-46
Identity = 103/222 (46.40%), Postives = 133/222 (59.91%), Query Frame = 1
Query:   64 EGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYXXXXXXXXXXXXXXPKIFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QSGGKFKFINTRSMWVNLRAIKRLIDTDELKIENFSSSKEVNDDQIISRGTAADSAIQFFDHTIGINVAQSRYLPVNSTXXXXXXXXXXYTADEGILVQNPARDNPANPSIELGPE 714
            +GH+ KD  YP   H  VF SLM SG LD LL QGKEY               KI NHLI NQ EYCMEV P    D++   +    G+ QL++I Q P       +S  KFK  NT ++WVNL+AIKRL++ D LK+E   + KEV+  +++   TAA +AI+FFDH IGINV +SR+LPV +T          Y   +G +++N AR NP+NPSIELGPE
Sbjct:  177 KGHAGKDGWYPPG-HGDVFPSLMNSGKLDALLSQGKEYVFIANSDNLGAIVDIKILNHLINNQNEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDAHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDHAIGINVPRSRFLPVKATSDLLLVQSDLYMLVDGFVIRNKARTNPSNPSIELGPE 397          
BLAST of CX290286 vs. ExPASy Swiss-Prot
Match: UGPA_SOLTU (UTP--glucose-1-phosphate uridylyltransferase OS=Solanum tuberosum PE=1 SV=3)

HSP 1 Score: 183.341 bits (464), Expect = 1.087e-45
Identity = 110/246 (44.72%), Postives = 143/246 (58.13%), Query Frame = 1
Query:   16 DIHSLSLSQQTH--EKSF-----EGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYXXXXXXXXXXXXXXPKIFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QSGGKFKFINTRSMWVNLRAIKRLIDTDELKIENFSSSKEVNDDQIISRGTAADSAIQFFDHTIGINVAQSRYLPVNSTXXXXXXXXXXYT-ADEGILVQNPARDNPANPSIELGPE 714
            DIH+ + SQ      + F     +G+S KD  YP   H  VF SLM SG LD LL +GKEY               KI NHLI N+ EYCMEV P    D++   +    GK QL++I Q P +     +S  KFK  NT ++WVNL AIKRL++ D LK+E   + KEV+  +++   TAA +AI+FFD  IG NV +SR+LPV +T          YT  DEG +++NPAR NP+NPSIELGPE
Sbjct:  163 DIHTFNQSQYPRLVTEDFAPLPCKGNSGKDGWYPPG-HGDVFPSLMNSGKLDALLAKGKEYVFVANSDNLGAIVDLKILNHLILNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLSAIKRLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIKFFDRAIGANVPRSRFLPVKATSDLLLVQSDLYTLTDEGYVIRNPARSNPSNPSIELGPE 407          
BLAST of CX290286 vs. ExPASy Swiss-Prot
Match: UGPA_HORVU (UTP--glucose-1-phosphate uridylyltransferase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.963e-44
Identity = 100/222 (45.05%), Postives = 132/222 (59.46%), Query Frame = 1
Query:   64 EGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYXXXXXXXXXXXXXXPKIFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QSGGKFKFINTRSMWVNLRAIKRLIDTDELKIENFSSSKEVNDDQIISRGTAADSAIQFFDHTIGINVAQSRYLPVNSTXXXXXXXXXXYTADEGILVQNPARDNPANPSIELGPE 714
            +G + KD  YP   H  VF SL  SG LD LL QGKEY               KI NHLI NQ EYCMEV P    D++   +    G+ QL++I Q P +     +S  KFK  NT ++WVNL+AIKRL+D + LK+E   + KEV+  +++   TAA +AI+FF+  IGINV +SR+LPV +T          YT  +G +++NPAR  P+NPSIELGPE
Sbjct:  183 KGQTGKDGWYPPG-HGDVFPSLNNSGKLDTLLSQGKEYVFVANSDNLGAIVDIKILNHLIHNQNEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEHVDEFKSIEKFKIFNTNNLWVNLKAIKRLVDAEALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFEKAIGINVPRSRFLPVKATSDLLLVQSDLYTLVDGYVIRNPARVKPSNPSIELGPE 403          
BLAST of CX290286 vs. ExPASy Swiss-Prot
Match: UGPA_PYRPY (UTP--glucose-1-phosphate uridylyltransferase OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.017e-43
Identity = 99/222 (44.59%), Postives = 131/222 (59.01%), Query Frame = 1
Query:   64 EGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYXXXXXXXXXXXXXXPKIFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QSGGKFKFINTRSMWVNLRAIKRLIDTDELKIENFSSSKEVNDDQIISRGTAADSAIQFFDHTIGINVAQSRYLPVNSTXXXXXXXXXXYTADEGILVQNPARDNPANPSIELGPE 714
            +G + KD  YP   H  VF SL  SG LDLLL QGKEY               KI +HLIQ + EYCMEV P    D++   +    G+ QL++I Q P +     +S  KFK  NT ++WVNL AIKRL++ D LK+E   + KEV+  +++   TAA +AI+FF+H IGINV +SR+LPV +T          YT  +G + +N AR NP NP+IELGPE
Sbjct:  181 KGQTGKDGWYPPG-HGDVFPSLKNSGKLDLLLSQGKEYVFIANSDNLGAVVDLKILHHLIQKKNEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDQHVNEFKSIEKFKIFNTNNLWVNLNAIKRLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFNHAIGINVPRSRFLPVKATSDLLLVQSDLYTLQDGFVTRNSARKNPENPTIELGPE 401          
BLAST of CX290286 vs. ExPASy Swiss-Prot
Match: UGPA1_ARATH (UTP--glucose-1-phosphate uridylyltransferase 1 OS=Arabidopsis thaliana GN=At5g17310 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.329e-43
Identity = 103/245 (42.04%), Postives = 139/245 (56.73%), Query Frame = 1
Query:   16 DIHSLSLSQQTHEKSFE-------GHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYXXXXXXXXXXXXXXPKIFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QSGGKFKFINTRSMWVNLRAIKRLIDTDELKIENFSSSKEVNDDQIISRGTAADSAIQFFDHTIGINVAQSRYLPVNSTXXXXXXXXXXYTADEGILVQNPARDNPANPSIELGPE 714
            DIH+ + S+     + E       G + KD  YP   H  VF SLM SG LD  L QGKEY               KI  HLIQN+ EYCMEV P    D++   +    GK QL++I Q P +     +S  KFK  NT ++WVNL+AIK+L++ D LK+E   + KEV+  +++   TAA +AI+FFD+ IG+NV +SR+LPV +T          YT  +G + +N AR NP NP+IELGPE
Sbjct:  157 DIHTFNQSKYPRVVADEFVPWPSKGKTDKDGWYPPG-HGDVFPSLMNSGKLDAFLSQGKEYVFIANSDNLGAIVDLKILKHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKATSDLLLVQSDLYTLVDGFVTRNKARTNPTNPAIELGPE 400          
BLAST of CX290286 vs. ExPASy Swiss-Prot
Match: UGPA_ASTPN (UTP--glucose-1-phosphate uridylyltransferase OS=Astragalus penduliflorus GN=UGP PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.960e-43
Identity = 96/222 (43.24%), Postives = 130/222 (58.56%), Query Frame = 1
Query:   64 EGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYXXXXXXXXXXXXXXPKIFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTKQSGG-----KFKFINTRSMWVNLRAIKRLIDTDELKIENFSSSKEVNDDQIISRGTAADSAIQFFDHTIGINVAQSRYLPVNSTXXXXXXXXXXYTADEGILVQNPARDNPANPSIELGPE 714
            +G + KD  YP   H  +F SL  SG LD L+ QGKEY               KI NHL+ ++ EYCMEV P    D++   +    G+ QL++I Q P +  G      KFK  NT ++WVNL+AIKRL++ D LK+E   + KEV+  +++   TAA +AI+FFD  IGINV +SR+LPV +T          YT + G +++N AR NP NPSIELGPE
Sbjct:  181 KGRTDKDGWYPPG-HGSMFPSLSNSGKLDALISQGKEYVFVANSDNLGAIVDLKILNHLVAHKNEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEHVGEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDKAIGINVPRSRFLPVKATSDLLLVQSDLYTVENGSVIRNKARTNPENPSIELGPE 401          
BLAST of CX290286 vs. ExPASy Swiss-Prot
Match: UGPA2_ARATH (Probable UTP--glucose-1-phosphate uridylyltransferase 2 OS=Arabidopsis thaliana GN=At3g03250 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.274e-42
Identity = 100/245 (40.82%), Postives = 139/245 (56.73%), Query Frame = 1
Query:   16 DIHSLSLSQQTHEKSFE-------GHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYXXXXXXXXXXXXXXPKIFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QSGGKFKFINTRSMWVNLRAIKRLIDTDELKIENFSSSKEVNDDQIISRGTAADSAIQFFDHTIGINVAQSRYLPVNSTXXXXXXXXXXYTADEGILVQNPARDNPANPSIELGPE 714
            DIH+ + S+     + E       G + K+  YP   H  VF +LM SG LD  L QGKEY                I  HLIQN+ EYCMEV P    D++   +    GK QL++I Q P +     +S  KFK  NT ++WVNL+AIK+L++ D LK+E   + KEV+  +++   TAA +AI+FFD+ IG+NV +SR+LPV ++          YT  +G + +N AR NP+NPSIELGPE
Sbjct:  156 DIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPG-HGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTILKHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKASSDLLLVQSDLYTLVDGFVTRNKARTNPSNPSIELGPE 399          
BLAST of CX290286 vs. ExPASy Swiss-Prot
Match: UGPA2_DICDI (UTP--glucose-1-phosphate uridylyltransferase 2 OS=Dictyostelium discoideum GN=ugpB PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.527e-23
Identity = 72/221 (32.58%), Postives = 113/221 (51.13%), Query Frame = 1
Query:   82 DKLYPSSD------HSVVFLSLMKSGTLDLLLVQGKEYXXXXXXXXXXXXXXPKIFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTKQ-----SGGKFKFINTRSMWVNLRAIKRLIDTDELKIENFSSSKEVNDDQ-IISRGTAADSAIQFFDHTIGINVAQSRYLPVNSTXXXXXXXXXXYTADEGILVQNPARDNPANPSIELG 708
            DKL+ S        H  VF +L  SG L+ L+ +GKEY                I   + +N++EY MEV      D++   +    GK +L++I Q P+ +     S  KFK  NT ++WVNL+A+ R++  + L   +   + +V D + II    AA +AI+FF++  G+NV +SR+LPV ST          Y+ ++G+LV N  R     P ++LG
Sbjct:  207 DKLFGSDSEWYPPGHGDVFFALQNSGLLETLINEGKEYLFISNVDNLGAVVDFNILEAMDKNKVEYIMEVTNKTRADVKGGTLIQYEGKAKLLEIAQVPSSKVEEFKSIKKFKIFNTNNIWVNLKAMDRILKQNLLDDMDIIINPKVADGKNIIQLEIAAGAAIEFFNNARGVNVPRSRFLPVKSTSDLFIVQSNLYSLEKGVLVMNKNRPFTTVPLVKLG 427          
BLAST of CX290286 vs. ExPASy Swiss-Prot
Match: UGPA1_SCHPO (Probable UTP--glucose-1-phosphate uridylyltransferase OS=Schizosaccharomyces pombe GN=SPCC1322.04 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.803e-23
Identity = 66/218 (30.28%), Postives = 106/218 (48.62%), Query Frame = 1
Query:   82 DKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYXXXXXXXXXXXXXXPKIFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QSGGKFKFINTRSMWVNLRAIKRLIDTDELKIENFSSSKEVNDD----QIISRGTAADSAIQFFDHTIGINVAQSRYLPVNSTXXXXXXXXXXYTADEGILVQNPARDNPANPSIELG 708
            D+ YP   H  VF +L  SG +D L+ QGKEY                I NH+++   EY ME+      D++   +    G  +L++I Q P +     +S  KFK+ NT ++W +L ++KR+++  EL +E   + K +        II   TAA +AI+ F +  G+NV + R+LPV +           Y+ + G +  NP R     P ++LG
Sbjct:  215 DEWYPPG-HGDVFEALTNSGIIDTLIAQGKEYLFVSNIDNLGAVVDLNILNHMVETNAEYLMELTNKTKADVKGGTLIDYDGNVRLLEIAQVPPQHVEEFKSIKKFKYFNTNNLWFHLPSVKRVVNNHELSMEIIPNKKTIKHKGENINIIQLETAAGAAIRHFKNAHGVNVPRRRFLPVKTCSDLLLVKSDLYSINHGQVEMNPRRFGGTAPLVKLG 431          
BLAST of CX290286 vs. ExPASy Swiss-Prot
Match: UGPA_HUMAN (UTP--glucose-1-phosphate uridylyltransferase OS=Homo sapiens GN=UGP2 PE=1 SV=5)

HSP 1 Score: 106.686 bits (265), Expect = 1.293e-22
Identity = 71/240 (29.58%), Postives = 118/240 (49.17%), Query Frame = 1
Query:   19 IHSLSLSQQTHEKSFEGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYXXXXXXXXXXXXXXPKIFNHLIQ----NQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QSGGKFKFINTRSMWVNLRAIKRLIDTDELKIENFSSSKEVNDD-QIISRGTAADSAIQFFDHTIGINVAQSRYLPVNSTXXXXXXXXXXYTADEGILVQNPARDNPANPSIELG 708
            I+  SL     + S+ G +  +  YP   H  ++ S   SG LD  + +GKEY                I NHL+      + E+ MEV      D++   +    GK +LV+I Q P       +S  KFK  NT ++W++L A+KRL + + + +E   ++K ++    +I   TA  +AI+ F++++GINV +SR+LPV +T          Y+ + G L  +  R+ P  P ++LG
Sbjct:  196 INKESLLPVAKDVSYSGENT-EAWYPPG-HGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVDLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLG 433          
The following BLAST results are available for this feature:
BLAST of CX290286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
UGPA_MUSAC2.190e-4646.40UTP--glucose-1-phosphate uridylyltransferase OS=Mu... [more]
UGPA_SOLTU1.087e-4544.72UTP--glucose-1-phosphate uridylyltransferase OS=So... [more]
UGPA_HORVU5.963e-4445.05UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]
UGPA_PYRPY1.017e-4344.59UTP--glucose-1-phosphate uridylyltransferase OS=Py... [more]
UGPA1_ARATH1.329e-4342.04UTP--glucose-1-phosphate uridylyltransferase 1 OS=... [more]
UGPA_ASTPN2.960e-4343.24UTP--glucose-1-phosphate uridylyltransferase OS=As... [more]
UGPA2_ARATH4.274e-4240.82Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA2_DICDI1.527e-2332.58UTP--glucose-1-phosphate uridylyltransferase 2 OS=... [more]
UGPA1_SCHPO5.803e-2330.28Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA_HUMAN1.293e-2229.58UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]

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Properties
Property NameValue
Genbank descriptionC02022E10SK IF1 Citrus clementina cDNA clone C02022E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290286 ID=CX290286; Name=CX290286; organism=Citrus clementina; type=EST; length=716bp
GAATTCGGCACGAGGGATATTCATTCTTTAAGTCTGAGCCAACAAACTCA
TGAGAAATCATTTGAAGGACATAGTCGTAAGGACAAATTGTATCCTTCTT
CTGATCACAGTGTAGTGTTCCTTTCCTTGATGAAAAGCGGCACCCTTGAT
TTATTATTGGTACAGGGTAAGGAGTATGCCCTTGTGGTTGACTCGGACAA
TGTTGCAGCTGTTGCTGACCCAAAAATCTTCAATCATTTGATTCAAAACC
AGATTGAGTACTGTATGGAGGTTGCTCCAGTTCCCTCAATTGACCTGAGA
AACAGTCTGATTAATTTGCGGCCAGGAAAGTTCCAGCTTGTGGACATCAC
TCAGAATCCCACTAAACAATCTGGAGGAAAGTTTAAGTTTATCAATACAA
GAAGCATGTGGGTGAATTTAAGAGCCATCAAGAGACTTATTGATACTGAT
GAACTAAAGATTGAAAATTTCTCTAGTTCAAAGGAAGTCAATGATGATCA
AATCATTTCGCGAGGAACAGCTGCTGATTCAGCTATACAGTTCTTTGATC
ACACTATTGGCATCAATGTCGCTCAATCTCGTTATCTCCCTGTGAATTCG
ACATCAGACTTACTTCTTCTCCAGTCAGATCTGTACACCGCTGATGAAGG
CATTTTAGTCCAAAATCCCGCCAGAGATAATCCTGCAAATCCTTCTATAG
AATTGGGACCTGAATT
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