CX290353
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP24_ARATH (Ubiquitin carboxyl-terminal hydrolase 24 OS=Arabidopsis thaliana GN=UBP24 PE=1 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 5.632e-85 Identity = 159/209 (76.08%), Postives = 175/209 (83.73%), Query Frame = 1 Query: 1 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYNK 627 DEWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ + V IEDAL LFSA E+LEGYR S TG GVV+A KS+KIQ LSKI+ILHLMRFSYGSQGSTKL K V+FPL+L L R LV+ S E +YELVAT+THHG DPSKGHYT DAR N QWL FDDASVT IGT VLHDQAYVLFY + Sbjct: 342 DEWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQ 550
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBPB_DICDI (Ubiquitin hydrolase B OS=Dictyostelium discoideum GN=ubpB PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.373e-37 Identity = 90/210 (42.86%), Postives = 126/210 (60.00%), Query Frame = 1 Query: 1 DEWETVGPKNKSAV-TRTQSFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 621 D WE VG K K+A+ T +Q LP +S IF G L+S G+K S TV+PF LHLDI E ++++EDAL+ F PE +EGY T ST ++A KS ++L +ILI+H RF++ S S KL K +RFP QL L + +KY L + V+HHGR S+GHYT D + QW+ +DD++ T + VL+ +AY+L Y Sbjct: 243 DNWEVVGKKGKTAIITNSQQELPKTPISQIFSGVLRSSFNRTGSKESITVEPFYCLHLDIRPEEINSLEDALKFFMKPEIIEGY-TCSTKKI-EISASKSWSFESLPRILIVHFKRFAFESDTSKKLDKLIRFPTQLSLS---TASNHQTQKKYSLFSVVSHHGRGLSQGHYTCDIYQPQQAQWIRYDDSTFTEVKEQDVLNREAYLLLY 447
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP10_HUMAN (Ubiquitin carboxyl-terminal hydrolase 10 OS=Homo sapiens GN=USP10 PE=1 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 1.407e-35 Identity = 85/221 (38.46%), Postives = 126/221 (57.01%), Query Frame = 1 Query: 1 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYNK 627 DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D + WL DD +V I +V+ AY+L+Y + Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRR 794
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP10_MOUSE (Ubiquitin carboxyl-terminal hydrolase 10 OS=Mus musculus GN=Usp10 PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 9.118e-35 Identity = 85/221 (38.46%), Postives = 125/221 (56.56%), Query Frame = 1 Query: 1 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYNK 627 DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D + WL DD +V I +V+ AY+L+Y + Sbjct: 572 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRR 788
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP3_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 3 OS=Schizosaccharomyces pombe GN=ubp3 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.080e-27 Identity = 79/228 (34.65%), Postives = 119/228 (52.19%), Query Frame = 1 Query: 7 WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAI--------------GTSKVLHDQ--AYVLFYNK 627 W VG K + R+ + S +S IFGGQL+S ++ + S ++PF L LDI +E +H++ DAL +APE L + +S G VTA K + I++L +LILHL RF Y + G T K +K + +P +L + +++ +PS G +Y+L A V HHG S GHYT D + + W DD + + SK+ H AY+LFY + Sbjct: 288 WTEVGKNKKPVIARSATVERSPISQIFGGQLRSTLRVPSARDSVLLEPFQPLQLDIQAEDIHSVIDALEHMTAPEILPEWHSSK----GNVTATKQMYIESLPPVLILHLKRFFYEASGGTQKNYKPIAYPARLSIPQNVF-SPSVRGSIHPEYDLNAVVYHHGTSASGGHYTVDVQQLDKSGWFRIDDTHIHRVPIHDVENSELSADPSLSKLGHGDRVAYLLFYTR 510
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP3_YEAST (Ubiquitin carboxyl-terminal hydrolase 3 OS=Saccharomyces cerevisiae GN=UBP3 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21 Identity = 72/236 (30.51%), Postives = 112/236 (47.46%), Query Frame = 1 Query: 19 GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNK--ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS---------------TKLHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADARYF-NDQWLHFDDASVTAIGTSKVLHD--------QAYVLFYNK 627 G K K+A RT +PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS E L SS+GN V AKK I L ++L++ RFS+ + + K+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD + +++W DD ++T + VL AY+L Y K Sbjct: 679 GKKTKTAAKRTVEIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYELLP--FKSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIEKIRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHSEHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP8_HUMAN (Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.014e-19 Identity = 65/188 (34.57%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 67 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 621 S + +F GQ KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R + + K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +KY L + H+G GHYTA + +W FDD V+ I S V AY+LFY Sbjct: 920 SIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP8_MOUSE (Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18 Identity = 64/188 (34.04%), Postives = 94/188 (50.00%), Query Frame = 1 Query: 67 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 621 S + +F GQ KS V+ + S T + F+ L L + S + T++D LRLFS E L + R + + K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +KY L + H+G GHYTA + +W FDD V+ I S V AY+LFY Sbjct: 882 SIIVALFQGQFKSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKKYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: U17L5_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17-like protein 5 OS=Homo sapiens GN=USP17L5 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.728e-17 Identity = 70/211 (33.18%), Postives = 103/211 (48.82%), Query Frame = 1 Query: 73 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYNKFRRLQDYKFQWEK--EAISDGFNP 693 + IFGG +S +K + S T P+L + LDI +A +++ AL + PE L G G A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L A + H G GHY + + QW DDA VTA + VL QAYVLFY + K +WE+ E++S G P Sbjct: 193 IHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLAKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ-------KSEWERHSESVSRGREP 391
BLAST of CX290353 vs. ExPASy Swiss-Prot
Match: UBP17_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17 OS=Homo sapiens GN=USP17A PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.849e-17 Identity = 70/211 (33.18%), Postives = 102/211 (48.34%), Query Frame = 1 Query: 73 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYNKFRRLQDYKFQWEK--EAISDGFNP 693 + IFGG +S +K + S T P+L + LDI +A +++ AL PE L G G A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L A + H G GHY + + QW DDA VTA + VL QAYVLFY + K +WE+ E++S G P Sbjct: 193 IHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ-------KSEWERHSESVSRGREP 391 The following BLAST results are available for this feature:
BLAST of CX290353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290353 ID=CX290353; Name=CX290353; organism=Citrus clementina; type=EST; length=736bpback to top |