CX290361

Overview
NameCX290361
Unique NameCX290361
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig288 contig Ccv1_Contig288:1..733. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290361 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 390.963 bits (1003), Expect = 3.570e-108
Identity = 184/207 (88.89%), Postives = 196/207 (94.69%), Query Frame = 3
Query:   18 GVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 638
            G+GWQGV IL+SGLFGT  G+SVSVENAGLLALTRVGSRRVVQI+AGFMIFFS+LGKFGAVFASIPAPI+AALYCLFFAYVGAGGLSFLQFCNLNSFR KFILGFS+F+GLS+PQYFNEYTAI G+GPVHT  RWFNDMVNVPFSSEPFVAG VAFFLDNTLHKKD  +RKDRG+HWWDKF SFKGDTRSEEFYSLPFNLNKYFPSV
Sbjct:  326 GIGWQGVAILISGLFGTGAGSSVSVENAGLLALTRVGSRRVVQIAAGFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSVFLGLSIPQYFNEYTAIKGYGPVHTGARWFNDMVNVPFSSEPFVAGSVAFFLDNTLHKKDSSIRKDRGKHWWDKFRSFKGDTRSEEFYSLPFNLNKYFPSV 532          
BLAST of CX290361 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 7.704e-103
Identity = 172/207 (83.09%), Postives = 191/207 (92.27%), Query Frame = 3
Query:   18 GVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 638
            GVGWQGV IL+SGLFGT  G+SVSVENAGLLALT++GSRRVVQISAGFMIFFS+LGKFGAVFASIP+PI+AALYCLFFAYVGAGGLS LQFCNLNSFR  FILGFSIF+GLS+PQYFNE+TAI G+GPVHT  RWFNDMVNVPFSS+ FV GCVA+ LD TLHKKDG +RKDRG+HWWD+FW+FK D R+EEFY+LPFNLNKYFPSV
Sbjct:  322 GVGWQGVAILISGLFGTGIGSSVSVENAGLLALTKIGSRRVVQISAGFMIFFSILGKFGAVFASIPSPIIAALYCLFFAYVGAGGLSLLQFCNLNSFRTLFILGFSIFLGLSIPQYFNEHTAIKGYGPVHTGARWFNDMVNVPFSSKAFVGGCVAYLLDTTLHKKDGSIRKDRGKHWWDRFWTFKNDPRTEEFYALPFNLNKYFPSV 528          
BLAST of CX290361 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 361.688 bits (927), Expect = 2.320e-99
Identity = 170/207 (82.13%), Postives = 186/207 (89.86%), Query Frame = 3
Query:   18 GVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 638
            GVGWQGVG+LL GLFG  NG SVSVENAGLLALTRVGSRRVVQISAGFMIFFS+LGKFGA+FASIPAP+VAAL+CLFFAYVGAGGLS LQFCNLNSFR KFILGFS+F+GLS+PQYFN+YTA+N +GPVHT  RWFNDM+NVPFSS+ FVAG +AFFLD T+  KD   RKDRG  WWD+F SFK DTRSEEFYSLPFNLNKYFPSV
Sbjct:  332 GVGWQGVGVLLCGLFGAGNGASVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAIFASIPAPVVAALHCLFFAYVGAGGLSLLQFCNLNSFRTKFILGFSVFMGLSIPQYFNQYTAVNKYGPVHTHARWFNDMINVPFSSKAFVAGILAFFLDVTMSSKDSATRKDRGMFWWDRFMSFKSDTRSEEFYSLPFNLNKYFPSV 538          
BLAST of CX290361 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 6.331e-89
Identity = 153/206 (74.27%), Postives = 177/206 (85.92%), Query Frame = 3
Query:   18 GVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 635
            G+GWQG GILL GLFG  N TSVSVENAGLLA+TRVGSRRV+Q++AGFMIFFS+LGKFGA+FASIPAPIVAALYCLFF+YVGAGGLS +QFCNLNSFR KFILGFSIF+GLS+PQYF +YT +  +GPV TS  WFN+++NVPFSS+ FV+G +AFFLD TL  KD   +KDRG  WW +F SF+ D RSEEFYSLP NL+KYFPS
Sbjct:  333 GIGWQGFGILLCGLFGAGNATSVSVENAGLLAVTRVGSRRVIQVAAGFMIFFSILGKFGAIFASIPAPIVAALYCLFFSYVGAGGLSLIQFCNLNSFRTKFILGFSIFMGLSIPQYFYQYTTLETYGPVRTSATWFNNIINVPFSSKAFVSGILAFFLDTTLPPKDKTTKKDRGLVWWKRFKSFQSDNRSEEFYSLPLNLSKYFPS 538          
BLAST of CX290361 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 5.753e-74
Identity = 136/206 (66.02%), Postives = 157/206 (76.21%), Query Frame = 3
Query:   18 GVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 635
            G+GWQG+G+LL+GLFGT  G++  VEN GLL LT+VGSRRVVQISAGFMIFFS+ GKFGAV ASIP PI AALYC+ FAYV + GL  LQFCNLNSFR KFILGFSIFIGLSV QYF EY  I+G GPVHT    FN ++ V FSS   V    AF LD T       VR+D GRHWW+KF  +  DTR+EEFY+LP+NLN++FPS
Sbjct:  320 GIGWQGIGVLLNGLFGTATGSTALVENTGLLGLTKVGSRRVVQISAGFMIFFSIFGKFGAVLASIPLPIFAALYCVLFAYVASAGLGLLQFCNLNSFRNKFILGFSIFIGLSVAQYFTEYLFISGRGPVHTRTSAFNVIMQVIFSSAATVGIMAAFLLDCTHSYGHASVRRDSGRHWWEKFRVYHTDTRTEEFYALPYNLNRFFPS 525          
BLAST of CX290361 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 1.200e-71
Identity = 130/205 (63.41%), Postives = 161/205 (78.54%), Query Frame = 3
Query:   18 GVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFP 632
            G+GWQG+GILL+GLFGT++G+SVSVEN GLL  TRVGSRRV+QISAGFMIFFS+LGKFGA+FASIP  I AA+YC+ F  V + GLSFLQF N+NS R  FI+G S+F+GLS+P+YF +++     GP HT+  WFND +N  F S P VA  VA FLDNTL  K  +  +DRG  WW KF +FKGD+R+EEFY+LPFNLN++FP
Sbjct:  320 GIGWQGIGILLNGLFGTLSGSSVSVENIGLLGSTRVGSRRVIQISAGFMIFFSMLGKFGALFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSLRNLFIVGVSLFLGLSIPEYFRDFSMKALHGPAHTNAGWFNDFLNTIFLSSPMVALMVAVFLDNTLDYK--ETARDRGLPWWAKFRTFKGDSRNEEFYTLPFNLNRFFP 522          
BLAST of CX290361 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 9.505e-69
Identity = 127/207 (61.35%), Postives = 153/207 (73.91%), Query Frame = 3
Query:   18 GVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 638
            G+GW+G+ I+L G+ GT+ GT+ SVENAGLLA+TRVGSRRV++ISA FMIFFS+  KFGAV ASIP PI AALYC+ FAY    G S LQ+CNLNS R KFIL  S+F+GLS+PQYF  Y    GFGPVHT    FN MVNV FSS   VA  +A+ LD T    +  V+KDRG  WW+KF S+K D RSEEFY LP+ L++YFPS+
Sbjct:  321 GIGWEGISIILDGMCGTLTGTAASVENAGLLAVTRVGSRRVIKISALFMIFFSLFAKFGAVLASIPLPIFAALYCVLFAYSAGAGFSLLQYCNLNSLRTKFILSISLFLGLSIPQYFRVYEMFFGFGPVHTHSVAFNVMVNVIFSSPATVAAILAYLLDCTHLYWEASVKKDRGWFWWEKFKSYKYDGRSEEFYRLPYGLSRYFPSL 527          
BLAST of CX290361 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.812e-67
Identity = 122/205 (59.51%), Postives = 152/205 (74.15%), Query Frame = 3
Query:   18 GVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFP 632
            G+GWQG+G+LL GLFGT  G++V VEN GLL LTRVGSRRVVQ+SAGFMI FS LGKFGAVFASIP PI AAL+C+ F  V A GLSFLQF N+NS R   I G S+F+G+S+PQ+F +Y     +G VHT+  WFN  +N  F S   V   +A F+DNT+  +  + +KDRG  WW KF +F+GD R+EEFY+LPFNLN++FP
Sbjct:  316 GIGWQGIGVLLDGLFGTGTGSTVLVENVGLLGLTRVGSRRVVQVSAGFMIVFSTLGKFGAVFASIPVPIYAALHCILFGLVAAVGLSFLQFTNMNSMRNLMITGLSLFLGISIPQFFAQYWDARHYGLVHTNAGWFNAFLNTLFMSPATVGLIIAVFMDNTMEVE--RSKKDRGMPWWVKFRTFRGDNRNEEFYTLPFNLNRFFP 518          
BLAST of CX290361 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 8.617e-62
Identity = 113/206 (54.85%), Postives = 142/206 (68.93%), Query Frame = 3
Query:   18 GVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 635
            G  W GVG+LL+G+ G + G + S EN GLLA+T++GSRRV+QISA FMIFFS+ GKFGA FASIP PI+A+LYC+   +V + GLS+LQFCNLNSF +KFILGFS F+ +S+PQYF EY   NG         W  DM+ V F S   VA  +A  LD TL +   + +KD G  WWDKF  +  D R++EFY LP  LNK+FPS
Sbjct:  337 GTCWLGVGVLLNGMLGGITGITTSTENVGLLAMTKIGSRRVIQISAAFMIFFSIFGKFGAFFASIPLPIMASLYCIVLCFVSSVGLSYLQFCNLNSFNIKFILGFSFFMAISIPQYFREY--YNGGWRSDHHSNWLEDMIRVIFMSHTTVAAIIAIVLDCTLCRDSDEAKKDCGMKWWDKFRLYNLDVRNDEFYGLPCRLNKFFPS 540          
BLAST of CX290361 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 1.090e-56
Identity = 105/205 (51.22%), Postives = 140/205 (68.29%), Query Frame = 3
Query:   21 VGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 635
            +G QG+G+LL G+FG++ G + SVEN GLL LTR+GSRRVVQ+S  FMIFFS+ GKFGA FASIP PI A +YC+    V A G+SF+QF + NS R  +++G S+F+ LS+ QYF   T+  G+GPV T+G WFND++N  F+S P VA  +A  LDNTL  +       RG  WW  F    GD R++EFYS+P  +N+  P+
Sbjct:  345 IGLQGIGVLLEGIFGSITGNTASVENVGLLGLTRIGSRRVVQVSTFFMIFFSIFGKFGAFFASIPLPIFAGVYCILLGIVVAVGISFIQFTDTNSMRNMYVIGVSLFLSLSIAQYFLANTSRAGYGPVRTAGGWFNDILNTIFASAPLVATILATILDNTLEARHAS-DDARGIPWWKPFQHRNGDGRNDEFYSMPLRINELMPT 548          
The following BLAST results are available for this feature:
BLAST of CX290361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
NAT6_ARATH3.570e-10888.89Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT5_ARATH7.704e-10383.09Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT7_ARATH2.320e-9982.13Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT8_ARATH6.331e-8974.27Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
NAT4_ARATH5.753e-7466.02Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
NAT2_ARATH1.200e-7163.41Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
LPE1_MAIZE9.505e-6961.35Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT1_ARATH6.812e-6759.51Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT10_ARATH8.617e-6254.85Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
NAT3_ARATH1.090e-5651.22Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC02023D06SK IF1 Citrus clementina cDNA clone C02023D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290361 ID=CX290361; Name=CX290361; organism=Citrus clementina; type=EST; length=733bp
GAATTCGGCACGAGGGTGGTGTGGGTTGGCAGGGAGTTGGCATTTTGCTT
TCTGGGTTATTTGGAACTGTAAACGGAACATCGGTGTCTGTAGAGAATGC
GGGTCTTTTGGCCTTGACTAGAGTTGGCAGTCGAAGGGTTGTCCAAATAT
CTGCTGGATTCATGATATTCTTCTCTGTTCTTGGGAAATTTGGAGCAGTC
TTTGCTTCAATTCCAGCACCGATTGTTGCTGCTTTATATTGCCTTTTCTT
TGCATATGTGGGTGCTGGAGGTCTTAGCTTCCTTCAGTTCTGTAACCTCA
ACAGTTTCCGAGTAAAGTTCATATTAGGCTTCTCTATCTTCATCGGTCTG
TCTGTGCCCCAATACTTCAACGAGTACACTGCCATTAATGGTTTCGGTCC
AGTTCACACTAGTGGAAGATGGTTCAACGATATGGTAAACGTTCCTTTCT
CCTCAGAACCATTTGTTGCTGGTTGTGTGGCATTTTTCCTTGACAACACA
CTGCATAAAAAGGATGGTCAAGTCAGGAAAGACAGGGGTAGGCATTGGTG
GGACAAGTTCTGGTCCTTCAAAGGCGACACAAGAAGTGAAGAATTTTACT
CCCTGCCCTTCAATTTAAACAAATATTTCCCATCTGTGTGATTCAATCGG
TAACATGTATTTCTCTTTGGGAAGTTTTCCAAAAGTCCTTGTGGGAACAC
ACAAAATATCATCATTGCTCTCTTGTGAATCTC
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