CX290408

Overview
NameCX290408
Unique NameCX290408
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11882 contig Ccv1_Contig11882:828..1542. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 7.645e-108
Identity = 182/238 (76.47%), Postives = 208/238 (87.39%), Query Frame = 2
Query:    2 FPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWWAPAKGVK 715
            FPLEE  + KH  RRD+LT+ IMAEHT AR+K GGA K HFVDALL LQ++Y+LS+DTIIGLLW+MI AGMDTT I+VEWAMAELI+NPRVQQK QEELD+V+G  RVMTEADF NL YLQCV KE+MRLHPPTPLMLPH+ANA+VK+ GY++PKGS VHVNVWA+ RDPA WK+PLEFRPERFLEED+DMKGHD+RLLPFGSGRR+CPG QLGI L  SMLGHLLHHF W P +G+K
Sbjct:  233 FPLEEGAFAKHGARRDRLTRAIMAEHTEARKKSGGA-KQHFVDALLTLQDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAELIRNPRVQQKVQEELDRVIGLERVMTEADFSNLPYLQCVTKEAMRLHPPTPLMLPHRANANVKVGGYDIPKGSNVHVNVWAVARDPAVWKDPLEFRPERFLEEDVDMKGHDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTPPEGMK 469          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 381.719 bits (979), Expect = 2.082e-105
Identity = 176/238 (73.95%), Postives = 204/238 (85.71%), Query Frame = 2
Query:    2 FPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWWAPAKGVK 715
            FP +E+ + +H  RRD+LT+ IM EHTLARQK  GA K HFVDALL L+++Y+LS+DTIIGLLW+MI AGMDTT IT EWAMAE+IKNPRVQQK QEE D+VVG +R++TEADF  L YLQCVVKES RLHPPTPLMLPH++NADVKI GY++PKGS VHVNVWA+ RDPA WKNP EFRPERFLEED+DMKGHD+RLLPFG+GRR+CPG QLGI LVTSM+ HLLHHF W P +G K
Sbjct:  232 FPADEKAFAEHGARRDRLTRAIMEEHTLARQKSSGA-KQHFVDALLTLKDQYDLSEDTIIGLLWDMITAGMDTTAITAEWAMAEMIKNPRVQQKVQEEFDRVVGLDRILTEADFSRLPYLQCVVKESFRLHPPTPLMLPHRSNADVKIGGYDIPKGSNVHVNVWAVARDPAVWKNPFEFRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTK 468          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 2.820e-94
Identity = 161/237 (67.93%), Postives = 197/237 (83.12%), Query Frame = 2
Query:    5 PLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWWAPAKGVK 715
            PL EE Y  HNERRD+LT  I+ EH  + ++ G  AK HFVDAL  L+++Y+LS+DT+IGLLW+MI AGMDTT I+VEWAMAEL++NPRVQ+K QEELD+VVG +RVM E DFQNL YLQ VVKES+RLHPPTPLMLPHKA+ +VKI GY++PKG+ V VNVWA+ RDP  W NPLE+RPERFLEE+ID+KG D+R+LPFG+GRR+CPG QLGI LV SM+GHLLHHF W+  +G +
Sbjct:  237 PLNEELYKTHNERRDRLTMKIIEEHAKSLKESG--AKQHFVDALFTLKQQYDLSEDTVIGLLWDMITAGMDTTVISVEWAMAELVRNPRVQKKLQEELDRVVGRDRVMLETDFQNLPYLQAVVKESLRLHPPTPLMLPHKASTNVKIGGYDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTR 471          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.143e-57
Identity = 108/199 (54.27%), Postives = 142/199 (71.36%), Query Frame = 2
Query:  122 FVDALLNLQE--EYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWWAPAKGV 712
            F+D+LL L E  E EL ++ I  LL +M  AG DT++ T+EWAMAEL++NP+   KAQ E+D+V+G N V+ E+D   L YLQ VVKE+ RLHP  PL++P KA +DV++ G+ VPK + V VNVWAIGRDP+ W+NP +F PERF+ +DID+KG DY L PFG GRRICPG+ L +  V+ ML  LL+ F W    GV
Sbjct:  281 FLDSLLILNEGDEAELDNNDIEHLLLDMFTAGTDTSSSTLEWAMAELLRNPKTMVKAQAEMDRVLGQNSVVQESDISGLPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGV 479          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.513e-55
Identity = 110/217 (50.69%), Postives = 143/217 (65.90%), Query Frame = 2
Query:   68 MAEHTLARQKGGGAAKPHFVDALLNLQE--EYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWWAPAKGV 712
            +AE +L         +  FVD LL+L E  E EL+ + I+ LL ++  AG DT + TVEWAMAEL++NP    KAQ E+D V+G   V+ E+D   L YLQ VVKE+ RLHP  PL++P KA +DV++ G+ VPK + V VNVWAIGRDP  W+N   F+PERFL +DID++G DY L PFG+GRRICPG+ L +  V  ML  LL+ F W    GV
Sbjct:  264 LAEKSLRDTNSKDVRERDFVDVLLDLTEGDEAELNTNDIVHLLLDLFGAGTDTNSSTVEWAMAELLRNPETMVKAQAEIDCVIGQKGVVEESDISALPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGV 480          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.807e-55
Identity = 107/202 (52.97%), Postives = 140/202 (69.31%), Query Frame = 2
Query:  110 AKPHFVDALLNLQ-EEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWWAPAKGV 712
            +K  FVD LL+ + +E ELS   I  LL +M  AG DT++ T+EWAM EL+KNP+   KAQ E+D V+G N ++ E+D   L YLQ VVKE+ RLH P PL++P KA +D +I G+ V K + V VNVWAIGRDP+ W NP +F PERFL +D+D++G DY L PFG+GRRICPG+ L +  V+ ML  LL+ F W   KGV
Sbjct:  278 SKNDFVDNLLDYKGDESELSISDIEHLLLDMFTAGTDTSSSTLEWAMTELLKNPKTMAKAQAEIDCVIGQNGIVEESDISKLPYLQAVVKETFRLHTPVPLLIPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGV 479          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.673e-54
Identity = 97/204 (47.55%), Postives = 139/204 (68.14%), Query Frame = 2
Query:   89 RQKGGGAAKPHFVDALLNLQEEY--ELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWW 694
            R + G   +   +D  L + ++   E +   I  L  ++ +AG DTT+IT+EWAM EL++ P +  KA+EEL++V+G   ++ E D   L YL C+VKE +RLHPP+PL+LP K    V++SGY +P G++V VN WAIGRDP  W + LEF+P+RFLE  +D++GHD+ L+PFG+GRRICPGI L   +V  MLG LL++F W
Sbjct:  252 RMRTGRFEQGDVLDVCLKMMQDNPNEFNHTNIKALFLDLFVAGTDTTSITIEWAMTELLRKPHIMSKAKEELEKVIGKGSIVKEDDVLRLPYLSCIVKEVLRLHPPSPLLLPRKVVTQVELSGYTIPAGTLVFVNAWAIGRDPTVWDDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDW 455          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.381e-53
Identity = 99/221 (44.80%), Postives = 144/221 (65.16%), Query Frame = 2
Query:   50 KLTKTIMAEHTLARQKGG-GAAKPHFVDALLNLQ-----EEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWW 694
            ++TK  + E    R+KG    +    +D L++ +     E  +LS+D I  ++  M +AG +TT+ +VEWA+ EL+++P+   K + E+ QV+GPN+   E D  +L Y+Q V+KE +RLHPP PL++P KA  D K  GY++PKG+ V VN WAIGRDP  W NP EF+PERFLE  +D+KG +Y L+PFG+GRR+C G+ LG  ++    G LLH F W
Sbjct:  213 EITKKFIEERIEERKKGEKNRSIKDLLDVLIDFEGSGKDEPDKLSEDEITVIILEMFLAGTETTSSSVEWALTELLRHPQAMAKVKLEILQVIGPNKKFEECDIDSLPYMQAVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDW 433          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.950e-52
Identity = 106/238 (44.54%), Postives = 150/238 (63.03%), Query Frame = 2
Query:    8 LEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFL----EEDIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWWAPAKG 709
            LEE K     E +D L+  I  ++  A   GG                  +L+D  I  LL N+ +AG DT++ TVEWA+AELI+NP++  +AQ+E+D+VVG +R++ E D   L YL+ +VKE+ RLHP TPL LP  A+   +I+GY +PKGS + +NVWAI RDP  W +PLEFRPERFL    +  +D++G+D+ ++PFG+GRRIC G+ LGI +V  M+  L+H F W    G
Sbjct:  256 LEEHKGKIFGEMKDLLSTLISLKNDDADNDGG------------------KLTDTEIKALLLNLFVAGTDTSSSTVEWAIAELIRNPKILAQAQQEIDKVVGRDRLVGELDLAQLTYLEAIVKETFRLHPSTPLSLPRIASESCEINGYFIPKGSTLLLNVWAIARDPNAWADPLEFRPERFLPGGEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSG 475          
BLAST of CX290408 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.950e-52
Identity = 103/233 (44.21%), Postives = 148/233 (63.52%), Query Frame = 2
Query:   14 EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYE---LSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFL---EEDIDMKGHDYRLLPFGSGRRICPGIQLGIXLVTSMLGHLLHHFWW 694
            E++  + +++ D L   +  EH     +  G  KP F+D ++   +  E   LS   I  LL N+  AG DT++  +EWA+AE++KNP + +KAQ E+DQV+G NR + E+D  NL YL+ + KE+ R HP TPL LP  +N    + GY +PK + + VN+WAIGRDP  W+NPLEF PERFL      ID +G+D+ L+PFG+GRRIC G ++GI +V  +LG L+H F W
Sbjct:  236 EKRMKRLHKKFDALLTKMFDEHKATTYERKG--KPDFLDVVMENGDNSEGERLSTTNIKALLLNLFTAGTDTSSSAIEWALAEMMKNPAILKKAQAEMDQVIGRNRRLLESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPQVWENPLEFNPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDW 466          
The following BLAST results are available for this feature:
BLAST of CX290408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C98A2_SOYBN7.645e-10876.47Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C98A3_ARATH2.082e-10573.95Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C98A1_SORBI2.820e-9467.93Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C76C4_ARATH6.143e-5754.27Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH1.513e-5550.69Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH9.807e-5552.97Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU1.673e-5447.557-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76A1_SOLME5.381e-5344.80Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
F3PH_PETHY5.950e-5244.54Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C75A1_PETHY5.950e-5244.21Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]

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Properties
Property NameValue
Genbank descriptionC02023H05SK IF1 Citrus clementina cDNA clone C02023H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290408 ID=CX290408; Name=CX290408; organism=Citrus clementina; type=EST; length=715bp
GTTTCCACTAGAGGAAGAGAAATATGTGAAGCACAATGAACGCAGAGATA
AGCTTACGAAAACCATAATGGCAGAACATACCCTTGCTCGTCAAAAGGGT
GGAGGAGCTGCTAAGCCACACTTCGTTGATGCGTTGCTCAATTTGCAAGA
GGAATATGAACTTAGTGATGATACAATTATTGGGCTACTTTGGAACATGA
TAATAGCAGGCATGGACACCACAACAATAACTGTAGAATGGGCAATGGCA
GAGCTCATAAAAAACCCTAGAGTGCAACAAAAAGCTCAGGAAGAACTAGA
CCAAGTAGTAGGCCCTAATCGCGTCATGACAGAAGCAGACTTTCAAAACC
TGCACTATCTCCAGTGCGTGGTCAAAGAATCAATGCGGCTACACCCACCA
ACGCCTCTAATGCTGCCCCACAAAGCCAACGCCGATGTAAAAATCAGCGG
CTACAACGTCCCGAAAGGATCAGTCGTACATGTAAACGTTTGGGCCATAG
GCAGAGACCCTGCTGATTGGAAAAACCCGTTGGAATTTAGGCCTGAGAGG
TTCTTAGAGGAGGACATTGACATGAAAGGACACGATTATCGATTGTTACC
ATTTGGTTCGGGGAGAAGAATTTGTCCCGGCATACAACTTGGCATANATT
TAGTGACCTCGATGTTGGGTCATCTTTTGCACCATTTTTGGTGGGCACCG
GCTAAAGGAGTGAAG
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