CX290412
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290412 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.586e-20 Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 94 ESNNATIFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGRN 324 ++ N+T+FVG L VS+E+L+ F FGEI+ VKIP GKGCGFVQF NR+ AE+A+ +LQG +G +RLSWGRN Sbjct: 299 DTANSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRN 375
BLAST of CX290412 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.983e-16 Identity = 37/74 (50.00%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 103 NATIFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGRN 324 N T+FVG L S++S++DL+ F FG IL++KIP GKGCGFVQ++ + AE A+ +QG +G +RL+WG N Sbjct: 296 NTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHN 369
BLAST of CX290412 vs. ExPASy Swiss-Prot
Match: NAM8_YEAST (Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.418e-16 Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 1 Query: 94 ESNNATIFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGRN 324 + NN T+F+G L S V++++LR F FG I+ VKIPVGK CGFVQ+ +R AE A+ +QG I VRLSWGR+ Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
BLAST of CX290412 vs. ExPASy Swiss-Prot
Match: NGR1_YEAST (Negative growth regulatory protein NGR1 OS=Saccharomyces cerevisiae GN=NGR1 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.421e-14 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 94 ESNNATIFVGALDSDVSDEDLREPFSQFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGR 321 + N T+FVG L ++ LR F FG IL+V+IP GK CGFV+F R DAE ++Q LQG +G +RLSWGR Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR 431 The following BLAST results are available for this feature:
BLAST of CX290412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290412 ID=CX290412; Name=CX290412; organism=Citrus clementina; type=EST; length=752bpback to top |