CX290476

Overview
NameCX290476
Unique NameCX290476
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length631
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX290476 vs. ExPASy Swiss-Prot
Match: YHIT_SULSO (Uncharacterized HIT-like protein SSO2163 OS=Sulfolobus solfataricus GN=SSO2163 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.099e-12
Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 3 
Query:   15 PLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDADSFNLLVNNGAAAGQVIFHTHIHIIPRKARD 245
            P++ GH+L+VP++H+         V+  +C  V  IS A+ KA  AD   +L N G +AGQV+FH+H HI+P  ++D
Sbjct:   31 PITPGHTLVVPRTHYENFLEISEDVIPYLCTAVRKISIAVKKALKADGIRILTNIGKSAGQVVFHSHFHIVPTWSQD 107
The following BLAST results are available for this feature:
BLAST of CX290476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YHIT_SULSO8.099e-1240.26Uncharacterized HIT-like protein SSO2163 OS=Sulfol... [more]
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Properties
Property NameValue
Genbank descriptionC02024F02SK IF1 Citrus clementina cDNA clone C02024F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290476 ID=CX290476; Name=CX290476; organism=Citrus clementina; type=EST; length=631bp
GAGGTGGATCCAATCCTCTGAGTCTTGGGCACTCTCTTATTGTCCCGAAA
TCTCATTTCTCTTGCTTGGATGCGACTCCTCCATCTGTGGTAGCTGCAAT
GTGCGCAAAGGTACCTTTAATCAGCAATGCAATCATGAAAGCCACAGATG
CTGATTCATTCAACTTGCTGGTTAACAATGGTGCAGCTGCTGGCCAGGTT
ATATTTCACACTCATATCCATATAATTCCCAGAAAGGCACGTGATTGCTT
ATGGACTTCTGAGAGTTTGAGGCGGCGTCCCTTAAAGATAGACAAGGAAA
CCTCTCAACTGGCTGATCAAGTACGCGAAAAGTTATCAAACATTTGTGAA
TGTAGTAGCAAGGGTCAAGAATCCAGTCTCTCATGAATCGTGATGTTTTA
TTGGATCAGTGATTGTTGTAATTTACTTATTGAGTTATGACTGTGACATC
AATAGTATGCTCATTCTTGCATGACTTGCTATTAGTTACTAAAAGGTTTT
GATACCATAGCCATAGTTGTTCTCGGCTGCGAATATCTTCCTTCTAGTTT
CTTGTCTTTGATTGCTGGTTCAATGACAGATTGTTAGATTCAGATGGGAG
GTTTCTCCCTTCAATTTAACTTTTGGTTACC
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