CX290489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290489 vs. ExPASy Swiss-Prot
Match: U727_PICSI (UPF0727 protein WS02710_H03 OS=Picea sitchensis PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.207e-16 Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 3 Query: 6 FHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 140 F DDRCANIFEALVGTLRAAKKRK +TYDGELLLQGVHDNVEI L Sbjct: 36 FSDDRCANIFEALVGTLRAAKKRKVVTYDGELLLQGVHDNVEIVL 80
BLAST of CX290489 vs. ExPASy Swiss-Prot
Match: U727_ORYSJ (UPF0727 protein OS=Oryza sativa subsp. japonica GN=Os03g0690000 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.059e-16 Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = 3 Query: 6 FHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 140 F+DDRCANIFEALVGTLRAAKKRK + YDGELLLQG HDNVEITL Sbjct: 34 FNDDRCANIFEALVGTLRAAKKRKIVKYDGELLLQGAHDNVEITL 78
BLAST of CX290489 vs. ExPASy Swiss-Prot
Match: U727_ORYSI (UPF0727 protein OS=Oryza sativa subsp. indica GN=OsI_012692 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.059e-16 Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = 3 Query: 6 FHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 140 F+DDRCANIFEALVGTLRAAKKRK + YDGELLLQG HDNVEITL Sbjct: 34 FNDDRCANIFEALVGTLRAAKKRKIVKYDGELLLQGAHDNVEITL 78
BLAST of CX290489 vs. ExPASy Swiss-Prot
Match: U727_ARATH (UPF0727 protein At4g33640 OS=Arabidopsis thaliana GN=At4g33640 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.335e-15 Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 3 Query: 6 FHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITLK 143 F+DDRCANIFEALVGTLRAAKKRK + ++GELLLQGVHD VEITL+ Sbjct: 34 FNDDRCANIFEALVGTLRAAKKRKIVAFEGELLLQGVHDKVEITLR 79
BLAST of CX290489 vs. ExPASy Swiss-Prot
Match: U727_THEHA (UPF0727 protein ST45-2 OS=Thellungiella halophila PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.973e-15 Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 3 Query: 6 FHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITLK 143 F+DDRCANIFEALVGTLRAAKKRK + + GELLLQGVHD VEITL+ Sbjct: 34 FNDDRCANIFEALVGTLRAAKKRKIVAFPGELLLQGVHDKVEITLR 79
BLAST of CX290489 vs. ExPASy Swiss-Prot
Match: CF115_SALSA (UPF0727 protein C6orf115 homolog OS=Salmo salar PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.883e-15 Identity = 36/45 (80.00%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 6 FHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 140 F+DDRCANIFEALVGTLRAAK++K + ++GELLLQGVHDNV+ITL Sbjct: 34 FNDDRCANIFEALVGTLRAAKRKKIIAFEGELLLQGVHDNVDITL 78
BLAST of CX290489 vs. ExPASy Swiss-Prot
Match: CF115_XENLA (UPF0727 protein C6orf115 homolog OS=Xenopus laevis PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.624e-15 Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 3 Query: 6 FHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 140 F DD+CAN+FEALVGTL+AAKKRK +TY GELLLQGVHDNV+I L Sbjct: 34 FSDDKCANLFEALVGTLKAAKKRKIITYQGELLLQGVHDNVDIVL 78
BLAST of CX290489 vs. ExPASy Swiss-Prot
Match: CF115_XENTR (UPF0727 protein C6orf115 homolog OS=Xenopus tropicalis PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.651e-15 Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 3 Query: 6 FHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 140 F DD+CAN+FEALVGTL+AAKKRK +TY GELLLQGVHDNV+I L Sbjct: 34 FSDDKCANLFEALVGTLKAAKKRKIVTYQGELLLQGVHDNVDIVL 78
BLAST of CX290489 vs. ExPASy Swiss-Prot
Match: CF115_DANRE (UPF0727 protein C6orf115 homolog OS=Danio rerio GN=si:dkey-34f16.3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.517e-14 Identity = 33/45 (73.33%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 6 FHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 140 F+DD+CAN+FEALVGTL+AAK++K +T+DGELLLQGVHDNV++ L Sbjct: 34 FNDDQCANLFEALVGTLKAAKRKKVITFDGELLLQGVHDNVDVVL 78
BLAST of CX290489 vs. ExPASy Swiss-Prot
Match: CF115_MOUSE (UPF0727 protein C6orf115 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.293e-14 Identity = 35/45 (77.78%), Postives = 41/45 (91.11%), Query Frame = 3 Query: 6 FHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDNVEITL 140 F DDRCAN+FEALVGTL+AAK+RK +TY GELLLQGVHD+V+I L Sbjct: 34 FQDDRCANLFEALVGTLKAAKRRKIVTYAGELLLQGVHDDVDIVL 78 The following BLAST results are available for this feature:
BLAST of CX290489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290489 ID=CX290489; Name=CX290489; organism=Citrus clementina; type=EST; length=353bpback to top |