CX290521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290521 vs. ExPASy Swiss-Prot
Match: GBF1_ARATH (G-box-binding factor 1 OS=Arabidopsis thaliana GN=GBF1 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 7.932e-39 Identity = 98/202 (48.51%), Postives = 113/202 (55.94%), Query Frame = 3 Query: 30 KATSGSGNDGVSQXXXXXXXXXXXXXXXXXXQQEFARGKKGSFDKMLADXXXXXXXXXXXXXXXXXXXXXXXXATNLNIGMDLWNTSPAAAGAAKMRTNXXXXXXXXXXXXIMPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLTSENNSIKEDLSRLCGPEAVANL 635 KA SGSGNDG S QQE +K SF +MLAD TNLNIGMDLW++ ++DERELKRQKRKQSNRESARRSRLRKQAECE+LQ RVE+LSNEN++LRDELQRLS EC+KL SENNSI+++L R+ G EAVANL Sbjct: 129 KALSGSGNDGASHSDESVTAGSSDENDENANQQEQGSIRKPSFGQMLADASSQSTTGEIQGSVPMKPVAP---GTNLNIGMDLWSSQAGVP--------------------------VKDERELKRQKRKQSNRESARRSRLRKQAECEQLQQRVESLSNENQSLRDELQRLSSECDKLKSENNSIQDELQRVLGAEAVANL 301
BLAST of CX290521 vs. ExPASy Swiss-Prot
Match: CPRF3_PETCR (Light-inducible protein CPRF3 OS=Petroselinum crispum GN=CPRF3 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.027e-26 Identity = 59/91 (64.84%), Postives = 74/91 (81.32%), Query Frame = 3 Query: 363 IMPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLTSENNSIKEDLSRLCGPEAVANL 635 ++PDQ + DERELKRQ+RKQSNRESARRSRLRKQA+ +ELQ R++ LS ENR LR LQR+SE C ++TSEN+SIKE+L R GP+ + L Sbjct: 185 MLPDQRVNDERELKRQRRKQSNRESARRSRLRKQAKSDELQERLDNLSKENRILRKNLQRISEACAEVTSENHSIKEELLRNYGPDGLTRL 275
BLAST of CX290521 vs. ExPASy Swiss-Prot
Match: HBP1A_WHEAT (Transcription factor HBP-1a OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.672e-23 Identity = 65/125 (52.00%), Postives = 77/125 (61.60%), Query Frame = 3 Query: 249 ATNLNIGMDLWN---TSPAAAGAAKMRTNXXXXXXXXXXXXIMPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLTSENNSIKEDLSRLCG 614 ATNLNIGMD W +SP A K+ + +QW DERELK+QKRK SNRESARRSRLRKQAECEEL R E L +EN +LR EL R+ +E E+L S+N S+K L G Sbjct: 213 ATNLNIGMDYWGATGSSPVPAMRGKVPSGSARG-----------EQW--DERELKKQKRKLSNRESARRSRLRKQAECEELGQRAEALKSENSSLRIELDRIKKEYEELLSKNTSLKAKLGESGG 324
BLAST of CX290521 vs. ExPASy Swiss-Prot
Match: TAF1_TOBAC (Transcriptional activator TAF-1 (Fragment) OS=Nicotiana tabacum GN=TAF1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.093e-19 Identity = 47/76 (61.84%), Postives = 59/76 (77.63%), Query Frame = 3 Query: 372 DQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLTSENNSIKEDL 599 + W+Q+ERELKR+KRKQSNRESARRSRLRKQAE EEL RV++L+ EN L+ E+ +L E EKL EN ++ E L Sbjct: 186 EAWLQNERELKREKRKQSNRESARRSRLRKQAEAEELAIRVQSLTAENMTLKSEINKLMENSEKLKLENAALMERL 261
BLAST of CX290521 vs. ExPASy Swiss-Prot
Match: GBF3_ARATH (G-box-binding factor 3 OS=Arabidopsis thaliana GN=GBF3 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 6.981e-19 Identity = 46/79 (58.23%), Postives = 61/79 (77.22%), Query Frame = 3 Query: 363 IMPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLTSENNSIKEDL 599 + P+ W+Q+ERELKR++RKQSNRESARRSRLRKQAE EEL +VE L+ EN LR EL +L+E+ +KL N ++ + L Sbjct: 248 VPPETWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEALTAENMALRSELNQLNEKSDKLRGANATLLDKL 326
BLAST of CX290521 vs. ExPASy Swiss-Prot
Match: EMBP1_WHEAT (DNA-binding protein EMBP-1 OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17 Identity = 53/119 (44.54%), Postives = 69/119 (57.98%), Query Frame = 3 Query: 249 ATNLNIGMDLWNTSPAAA------GAAKMRTNXXXXXXXXXXXXIMPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLTSENNSI 587 A NLNIGMD + SP++ AA ++N DERELKR++RKQSNRESARRSRLRKQ ECEEL +V L+ N LR EL +L ++C+ + +EN + Sbjct: 209 APNLNIGMDPLSASPSSLVQGEVNAAASSQSNASLSQ--------------MDERELKRERRKQSNRESARRSRLRKQQECEELAQKVSELTAANGTLRSELDQLKKDCKTMETENKKL 313
BLAST of CX290521 vs. ExPASy Swiss-Prot
Match: CPRF1_PETCR (Common plant regulatory factor 1 OS=Petroselinum crispum GN=CPRF1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.720e-17 Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 3 Query: 363 IMP-DQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLTSENNSIKE 593 +MP D W+ ++R+LKR++RKQSNRESARRSRLRKQAE EEL +V++L+ EN L+ E+ RL+ EKLT++N+ + E Sbjct: 257 MMPNDSWLHNDRDLKRERRKQSNRESARRSRLRKQAEAEELAIKVDSLTAENMALKAEINRLTLTAEKLTNDNSRLLE 334
BLAST of CX290521 vs. ExPASy Swiss-Prot
Match: GBF2_ARATH (G-box-binding factor 2 OS=Arabidopsis thaliana GN=GBF2 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.235e-16 Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 3 Query: 366 MPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLTSENNSIKEDL 599 +P W +E+E+KR+KRKQSNRESARRSRLRKQAE E+L +V+ L EN +LR +L +L+ E EKL EN +I + L Sbjct: 241 VPQPW--NEKEVKREKRKQSNRESARRSRLRKQAETEQLSVKVDALVAENMSLRSKLGQLNNESEKLRLENEAILDQL 316 The following BLAST results are available for this feature:
BLAST of CX290521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290521 ID=CX290521; Name=CX290521; organism=Citrus clementina; type=EST; length=637bpback to top |