CX290528
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290528 vs. ExPASy Swiss-Prot
Match: CSN2_ARATH (COP9 signalosome complex subunit 2 OS=Arabidopsis thaliana GN=CSN2 PE=1 SV=1) HSP 1 Score: 371.318 bits (952), Expect = 2.575e-102 Identity = 184/221 (83.26%), Postives = 195/221 (88.24%), Query Frame = 3 Query: 18 SDEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAIPHPRIMGNIRE 680 SDEE EEQDVDIENQYYNSKG+VET+PE AL+GFAEVV MEPEKA+WGFKALKQTVK+YYRLGKYKEMM+AY EMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN LL+EFYQTTLKALEEAKNERLWFKTNLKLC IWFD+GEY RM+KILKELHKSCQ+EDGTDDQKKGSQLLEVYAIEIQ+YTET SAIPHPRIMG IRE Sbjct: 15 SDEEQEEQDVDIENQYYNSKGMVETEPEEALSGFAEVVQMEPEKADWGFKALKQTVKIYYRLGKYKEMMEAYTEMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNTGLLQEFYQTTLKALEEAKNERLWFKTNLKLCNIWFDIGEYRRMTKILKELHKSCQKEDGTDDQKKGSQLLEVYAIEIQIYTETKDNKKLKQLYHKALAIKSAIPHPRIMGIIRE 235
BLAST of CX290528 vs. ExPASy Swiss-Prot
Match: CSN2_XENLA (COP9 signalosome complex subunit 2 (Fragment) OS=Xenopus laevis GN=csn2 PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.092e-68 Identity = 125/221 (56.56%), Postives = 165/221 (74.66%), Query Frame = 3 Query: 18 SDEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAIPHPRIMGNIRE 680 S++ E +VD+ENQYYNSK L E DP+ AL+ F +V+ +E EK EWGFKALKQ +K+ ++LG Y EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++ S S+ LL+EFY+TTL AL++AKN+RLWFKTN KL K++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT SAIPHP IMG IRE Sbjct: 19 SEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLGNYPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI--STSKQMDLLQEFYETTLDALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 237
BLAST of CX290528 vs. ExPASy Swiss-Prot
Match: CSN2_RAT (COP9 signalosome complex subunit 2 OS=Rattus norvegicus GN=Cops2 PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.577e-67 Identity = 123/221 (55.66%), Postives = 165/221 (74.66%), Query Frame = 3 Query: 18 SDEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAIPHPRIMGNIRE 680 S++ E +VD+ENQYYNSK L E DP+ AL+ F +V+ +E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++ S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT SAIPHP IMG IRE Sbjct: 21 SEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI--STSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 239
BLAST of CX290528 vs. ExPASy Swiss-Prot
Match: CSN2_MOUSE (COP9 signalosome complex subunit 2 OS=Mus musculus GN=Cops2 PE=1 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.577e-67 Identity = 123/221 (55.66%), Postives = 165/221 (74.66%), Query Frame = 3 Query: 18 SDEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAIPHPRIMGNIRE 680 S++ E +VD+ENQYYNSK L E DP+ AL+ F +V+ +E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++ S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT SAIPHP IMG IRE Sbjct: 21 SEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI--STSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 239
BLAST of CX290528 vs. ExPASy Swiss-Prot
Match: CSN2_HUMAN (COP9 signalosome complex subunit 2 OS=Homo sapiens GN=COPS2 PE=1 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.577e-67 Identity = 123/221 (55.66%), Postives = 165/221 (74.66%), Query Frame = 3 Query: 18 SDEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAIPHPRIMGNIRE 680 S++ E +VD+ENQYYNSK L E DP+ AL+ F +V+ +E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++ S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT SAIPHP IMG IRE Sbjct: 21 SEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI--STSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 239
BLAST of CX290528 vs. ExPASy Swiss-Prot
Match: CSN2_DANRE (COP9 signalosome complex subunit 2 OS=Danio rerio GN=cops2 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 4.588e-67 Identity = 122/221 (55.20%), Postives = 165/221 (74.66%), Query Frame = 3 Query: 18 SDEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAIPHPRIMGNIRE 680 S++ E +VD+ENQYYNSK L E DP+ AL+ F +V+ +E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI+SAVTRNYSEK IN+I+D++ S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K++ + E+G++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT SAIPHP IMG IRE Sbjct: 21 SEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI--STSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEFGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 239
BLAST of CX290528 vs. ExPASy Swiss-Prot
Match: CSN2_DROME (COP9 signalosome complex subunit 2 OS=Drosophila melanogaster GN=alien PE=1 SV=2) HSP 1 Score: 251.521 bits (641), Expect = 2.974e-66 Identity = 126/222 (56.76%), Postives = 163/222 (73.42%), Query Frame = 3 Query: 18 SDEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVAMEP-EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAIPHPRIMGNIRE 680 S++ E DVD+ENQYYNSK L E +P+ ALA F +V+ +E EK EWGFKALKQ +K+ +RL Y EMM Y+++LTYIKSAVTRN+SEK IN+I+D++S S+N +LL+ FY+TTL AL +AKN+RLWFKTN KL K++FD ++ ++ KILK+LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT SAIPHP IMG IRE Sbjct: 21 SEDSNSEPDVDLENQYYNSKALKEEEPKAALASFQKVLDLENGEKGEWGFKALKQMIKINFRLCNYDEMMVRYKQLLTYIKSAVTRNHSEKSINSILDYIS--TSKNMALLQNFYETTLDALRDAKNDRLWFKTNTKLGKLYFDRSDFTKLQKILKQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTVQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 240
BLAST of CX290528 vs. ExPASy Swiss-Prot
Match: CSN2_DICDI (COP9 signalosome complex subunit 2 OS=Dictyostelium discoideum GN=csn2 PE=1 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.293e-61 Identity = 112/219 (51.14%), Postives = 157/219 (71.69%), Query Frame = 3 Query: 27 EPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVAMEP-EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAIPHPRIMGNIRE 680 + E + V+IENQYYNSKGL++ A+ + +VV +E EK EWGFKALK+ KLY+R+G + M++++++ L Y KS+ + NY EK IN+++D VS S + ++++ + TLK+L + KNER+WF+TNLKL K+ F+ EYGR++KIL++LHKSC+ EDGTDDQKKGSQL+++YA+EIQMYTET SAIPHPRIMG IRE Sbjct: 25 DSESEGVEIENQYYNSKGLIDESIPDAIKSYEKVVDLENGEKGEWGFKALKKITKLYFRIGDFDNMLESFKKFLPYTKSSASSNYIEKGINSVLDMVSSSNTIELDMIQKVFDLTLKSLLDTKNERVWFRTNLKLAKLLFEKAEYGRLAKILRDLHKSCELEDGTDDQKKGSQLVDIYALEIQMYTETKNNKKLKDLYKKALEIKSAIPHPRIMGIIRE 243
BLAST of CX290528 vs. ExPASy Swiss-Prot
Match: CSN2_EMENI (COP9 signalosome complex subunit 2 OS=Emericella nidulans GN=csnB PE=1 SV=2) HSP 1 Score: 233.417 bits (594), Expect = 8.380e-61 Identity = 107/221 (48.42%), Postives = 152/221 (68.78%), Query Frame = 3 Query: 24 EEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN--FSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAIPHPRIMGNIRE 680 ++ E D+ IEN+YYN+K + +PE A+ F V A+E +K +WGFK LKQ +KL ++LG+Y + ++ YRE+LTY+KSAVTRNYSEK INN++D++ + + + EFY TL + + NERLW KTN+KL ++W + EYG++SK ++ELH++CQREDG+DD KG+ LLE+YA+EIQMY ET SA+PHP+IMG IRE Sbjct: 24 DDDETGDIGIENKYYNAKQIKVDNPEEAIDEFLGVPALEQDKGDWGFKGLKQAIKLEFKLGRYSDAVEHYRELLTYVKSAVTRNYSEKSINNMLDYIEKGSDDEKAYQCMEEFYSLTLNSFQNTNNERLWLKTNIKLARLWLERREYGQLSKKVRELHRACQREDGSDDPSKGTYLLELYALEIQMYAETKNNKRLKALYQRALRVRSAVPHPKIMGIIRE 244
BLAST of CX290528 vs. ExPASy Swiss-Prot
Match: CSN2_CAEEL (COP9 signalosome complex subunit 2 OS=Caenorhabditis elegans GN=csn-2 PE=1 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 3.893e-58 Identity = 114/224 (50.89%), Postives = 156/224 (69.64%), Query Frame = 3 Query: 21 DEEPEEQDVDIENQYYNSKGLVETDP-EGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTE---TXXXXXXXXXXXXXXXXXSAIPHPRIMGNIRE 680 D+ E DVD+ENQYY +KGL + A+ F +V+ +E EK EWGFKALKQ +K+ + + ++M++ YR++LTYIKSAVT+NYSEK IN I+D++S S+ LL+ FY+TTL AL++AKNERLWFKTN KL K++FD+ E+ ++ KI+K+L SC+ E G +DQ+KG+QLLE+YA+EIQMYTE SAIPHP I+G IRE Sbjct: 18 DDSGSEPDVDMENQYYTAKGLRSDGKLDEAIKSFEKVLELEGEKGEWGFKALKQMIKITFGQNRLEKMLEYYRQLLTYIKSAVTKNYSEKSINAILDYIS--TSRQMDLLQHFYETTLDALKDAKNERLWFKTNTKLGKLFFDLHEFTKLEKIVKQLKVSCKNEQGEEDQRKGTQLLEIYALEIQMYTEQKNNKALKWVYELATQAIHTKSAIPHPLILGTIRE 239 The following BLAST results are available for this feature:
BLAST of CX290528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290528 ID=CX290528; Name=CX290528; organism=Citrus clementina; type=EST; length=681bpback to top |