CX290561 | Citrus Genome Database

Overview


Name	CX290561
Unique Name	CX290561
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	495

Libraries


Library Name	Type
IF1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Ccv1_Contig11901	contig	Ccv1_Contig11901:203..698.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CX290561 vs. ExPASy Swiss-Prot
Match: ENO_RICCO (Enolase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.418e-40
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 2

Query:    2 ESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 253
            ESIEAVRMSK+AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFR PVEPY
Sbjct:  362 ESIEAVRMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRTPVEPY 445

[Close]

BLAST of CX290561 vs. ExPASy Swiss-Prot
Match: ENO2_HEVBR (Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.200e-39
Identity = 80/84 (95.24%), Postives = 82/84 (97.62%), Query Frame = 2

Query:    2 ESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 253
            ESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGA FR PVEPY
Sbjct:  362 ESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGANFRTPVEPY 445

[Close]

BLAST of CX290561 vs. ExPASy Swiss-Prot
Match: ENO1_MAIZE (Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 2.674e-39
Identity = 80/84 (95.24%), Postives = 82/84 (97.62%), Query Frame = 2

Query:    2 ESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 253
            ESIEAVRMSK+AGWGVMASHRSGETEDTFIADLSVGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG  AVYAGAKFRAPVEPY
Sbjct:  363 ESIEAVRMSKRAGWGVMASHRSGETEDTFIADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDAAVYAGAKFRAPVEPY 446

[Close]

BLAST of CX290561 vs. ExPASy Swiss-Prot
Match: ENO_ORYSJ (Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 3.493e-39
Identity = 79/84 (94.05%), Postives = 82/84 (97.62%), Query Frame = 2

Query:    2 ESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 253
            ESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGLATGQIKTGAPCRSERLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  363 ESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAAAVYAGAKFRAPVEPY 446

[Close]

BLAST of CX290561 vs. ExPASy Swiss-Prot
Match: ENO1_HEVBR (Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 3.493e-39
Identity = 79/84 (94.05%), Postives = 82/84 (97.62%), Query Frame = 2

Query:    2 ESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 253
            ESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  362 ESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGANFRKPVEPY 445

[Close]

BLAST of CX290561 vs. ExPASy Swiss-Prot
Match: ENO2_MAIZE (Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.327e-38
Identity = 78/84 (92.86%), Postives = 82/84 (97.62%), Query Frame = 2

Query:    2 ESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 253
            ESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  363 ESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGAIAVYAGAKFRAPVEPY 446

[Close]

BLAST of CX290561 vs. ExPASy Swiss-Prot
Match: ENO_SOLLC (Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 5.044e-38
Identity = 76/84 (90.48%), Postives = 81/84 (96.43%), Query Frame = 2

Query:    2 ESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 253
            ESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  361 ESIEAVKMSKKAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGASFRKPVEPY 444

[Close]

BLAST of CX290561 vs. ExPASy Swiss-Prot
Match: ENO_MESCR (Enolase OS=Mesembryanthemum crystallinum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 5.044e-38
Identity = 77/84 (91.67%), Postives = 81/84 (96.43%), Query Frame = 2

Query:    2 ESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 253
            ESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSVGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG +AVYAGA FR PVEPY
Sbjct:  361 ESIEAVKMSKKAGWGVMASHRSGETEDTFIADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYAGANFRRPVEPY 444

[Close]

BLAST of CX290561 vs. ExPASy Swiss-Prot
Match: ENO_ARATH (Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.917e-37
Identity = 74/84 (88.10%), Postives = 80/84 (95.24%), Query Frame = 2

Query:    2 ESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 253
            ESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG+EA+YAG  FR PVEPY
Sbjct:  361 ESIEAVKMSKKAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSEAIYAGVNFRKPVEPY 444

[Close]

BLAST of CX290561 vs. ExPASy Swiss-Prot
Match: ENO_ALNGL (Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.917e-37
Identity = 78/84 (92.86%), Postives = 81/84 (96.43%), Query Frame = 2

Query:    2 ESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 253
            ESIEAV+MSK+AGWGVMA HRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  358 ESIEAVKMSKRAGWGVMA-HRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGANFRTPVEPY 440

The following BLAST results are available for this feature:

BLAST of CX290561 vs. ExPASy Swiss-Prot

BLAST of CX290561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_RICCO	1.418e-40	97.62	Enolase OS=Ricinus communis PE=2 SV=1	[more]
ENO2_HEVBR	1.200e-39	95.24	Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1	[more]
ENO1_MAIZE	2.674e-39	95.24	Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1	[more]
ENO_ORYSJ	3.493e-39	94.05	Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE...	[more]
ENO1_HEVBR	3.493e-39	94.05	Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1	[more]
ENO2_MAIZE	1.327e-38	92.86	Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1	[more]
ENO_SOLLC	5.044e-38	90.48	Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1	[more]
ENO_MESCR	5.044e-38	91.67	Enolase OS=Mesembryanthemum crystallinum GN=PGH1 P...	[more]
ENO_ARATH	1.917e-37	88.10	Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1	[more]
ENO_ALNGL	1.917e-37	92.86	Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	C02025E07SK IF1 Citrus clementina cDNA clone C02025E07, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX290561 ID=CX290561; Name=CX290561; organism=Citrus clementina; type=EST; length=495bp
TGAGAGCATTGAAGCCGTCAGAATGTCCAAGCAAGCTGGGTGGGGTGTGA
TGGCCAGCCACCGCAGTGGTGAGACTGAAGATACTTTCATTGCCGATCTC
TCAGTGGGCTTGGCCACGGGTCAAATTAAGACAGGAGCACCATGCAGGTC
AGAGCGTCTTGCAAAGTATAATCAGCTTCTGAGAATTGAAGAAGAGCTCG
GTGCTGAAGCAGTTTATGCTGGTGCCAAGTTCCGTGCCCCTGTTGAACCC
TACTAGAGTTTGAGATGCTGATCTGGTGTGGTGCTGGATTTGAGCAATGG
AGGTTTACTTCAATAAGTTATGTAAAATGGATTTTTATGGGTTTTTAGCA
TTTTGTGACCCAAGATATTTCCTCAATAATTTTGACACAGTTTTTGTCTG
AGAGCTTGAACCTTGCTGTATGAGGAACCATTTCCTAGAGCATGTTTTAT
TAAAATGAGTATCTAGTTGCGGTGCTAAAAAAAAAAAAAAAAAAA