CX290584

Overview
NameCX290584
Unique NameCX290584
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length656
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5053 contig Ccv1_Contig5053:536..1193. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GDL79_ARATH (GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 3.091e-92
Identity = 146/182 (80.22%), Postives = 166/182 (91.21%), Query Frame = 1
Query:   16 KISNPALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVNGECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIASNLCPNRDLYAFWDPFHPSEKAT 561
            ++ N ALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVV++ISEYRK+L ++Y+LGARRVLVTGTGP+GCVPAELAQR  NGEC+ ELQRAA LFNPQL+QM+ +LN+++GS  F+AAN   MHMDFI DPQAYGFVTSK+ACCGQGPYNGIGLCT  SNLCPNRDL+AFWDPFHPSEKA+
Sbjct:  155 RLVNGALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVFVISEYRKVLRKMYDLGARRVLVTGTGPMGCVPAELAQRSRNGECATELQRAASLFNPQLIQMITDLNNEVGSSAFIAANTQQMHMDFISDPQAYGFVTSKVACCGQGPYNGIGLCTPLSNLCPNRDLFAFWDPFHPSEKAS 336          

HSP 2 Score: 41.9726 bits (97), Expect = 3.091e-92
Identity = 18/31 (58.06%), Postives = 27/31 (87.10%), Query Frame = 3
Query:  552 ESNRIIVQRIASGSSKYMNPMNLSTIMALDS 644
            +++RII Q+I +GS +YM+PMNLSTI+ +DS
Sbjct:  334 KASRIIAQQILNGSPEYMHPMNLSTILTVDS 364          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 1.533e-85
Identity = 135/181 (74.59%), Postives = 157/181 (86.74%), Query Frame = 1
Query:   16 KISNPALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVNGECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIASNLCPNRDLYAFWDPFHPSEKA 558
            ++ N ALVLITLGGNDFVNNYYL+PFSARSRQ++LPDYVVYLISEY KIL ++YELGARRVLVTGTG +GC PAELAQ   NGEC   LQ AA LFNPQLV ++  +N++IG DVFVAANA+ M+MD++ +P+ +GFVTSK+ACCGQGPYNGIGLCT  SNLCPNRDLYAFWD FHP+EKA
Sbjct:  154 QLVNQALVLITLGGNDFVNNYYLIPFSARSRQYALPDYVVYLISEYGKILRKLYELGARRVLVTGTGAMGCAPAELAQHSRNGECYGALQTAAALFNPQLVDLIASVNAEIGQDVFVAANAYQMNMDYLSNPEQFGFVTSKVACCGQGPYNGIGLCTPVSNLCPNRDLYAFWDAFHPTEKA 334          

HSP 2 Score: 46.9802 bits (110), Expect = 1.533e-85
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = 3
Query:  552 ESNRIIVQRIASGSSKYMNPMNLSTIMALDS 644
            ++NRIIV +I +GSSKYM+PMNLST M LDS
Sbjct:  333 KANRIIVNQILTGSSKYMHPMNLSTAMLLDS 363          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GDL77_ARATH (GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana GN=At5g18430 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 4.859e-78
Identity = 127/182 (69.78%), Postives = 151/182 (82.97%), Query Frame = 1
Query:   16 KISNPALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGV-NGECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIASNLCPNRDLYAFWDPFHPSEKA 558
            ++ + ALVLIT+GGNDFVNNY+L P+SARSRQF+LPDYV  LISEY+KIL R+  LG  RVLVTG GPLGC PAELA+ G  NG CS ELQRAA L++PQL+QM+NELN +IG +VF+AAN   M  DF+  P+ YGFVTSK+ACCGQGPYNG+GLCT+ SNLCPNR+LY FWD FHP+EKA
Sbjct:  154 RLVSQALVLITVGGNDFVNNYFLFPYSARSRQFTLPDYVRLLISEYKKILLRLNSLGVGRVLVTGAGPLGCAPAELARSGTSNGRCSAELQRAASLYDPQLLQMINELNKKIGRNVFIAANTNQMQEDFLSTPRRYGFVTSKVACCGQGPYNGMGLCTVLSNLCPNRELYVFWDAFHPTEKA 335          

HSP 2 Score: 40.817 bits (94), Expect = 4.859e-78
Identity = 17/29 (58.62%), Postives = 26/29 (89.66%), Query Frame = 3
Query:  552 ESNRIIVQRIASGSSKYMNPMNLSTIMAL 638
            ++NR+IV+ I +G++KYMNPMNLS+ +AL
Sbjct:  334 KANRMIVRHILTGTTKYMNPMNLSSALAL 362          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GDL67_ARATH (GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.853e-75
Identity = 124/183 (67.76%), Postives = 147/183 (80.33%), Query Frame = 1
Query:   16 KISNPALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRG-VNGECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIASNLCPNRDLYAFWDPFHPSEKAT 561
            ++ N ALVL+TLGGNDFVNNY+  P S R RQ SL ++   LISEY+KIL  +YELGARRV+VTGTGPLGCVPAELA  G VNGEC+ E Q+AA +FNP LVQML  LN +IGSDVF+ ANAF  + DFI++PQ +GFVTSK+ACCGQG YNG G+CT  S LC +R+ YAFWDPFHP+EKAT
Sbjct:  156 QLVNGALVLMTLGGNDFVNNYFF-PISTRRRQSSLGEFSQLLISEYKKILTSLYELGARRVMVTGTGPLGCVPAELASSGSVNGECAPEAQQAAAIFNPLLVQMLQGLNREIGSDVFIGANAFNTNADFINNPQRFGFVTSKVACCGQGAYNGQGVCTPLSTLCSDRNAYAFWDPFHPTEKAT 337          

HSP 2 Score: 50.8322 bits (120), Expect = 2.853e-75
Identity = 23/33 (69.70%), Postives = 30/33 (90.91%), Query Frame = 3
Query:  552 ESNRIIVQRIASGSSKYMNPMNLSTIMALDSRV 650
            ++ R+IVQ+I +GS +YMNPMNLSTIMALDSR+
Sbjct:  335 KATRLIVQQIMTGSVEYMNPMNLSTIMALDSRI 367          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GLIP7_ARATH (GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.240e-31
Identity = 64/180 (35.56%), Postives = 100/180 (55.56%), Query Frame = 1
Query:   31 ALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVNGE--CSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIASNLCPNRDLYAFWDPFHPSEKATE 564
            +++ I +G ND++NNY +    + S+ +S  DY   LI      ++R+Y LGAR++++ G+GPLGC+P++L+    N    C  ++     +FN +L  + N LN+ +    FV  N F +  D + +P  YG V S  ACCG G Y G   C      C +R+ Y FWD FHP+E A +
Sbjct:  160 SIIGINIGSNDYINNYLMPERYSTSQTYSGEDYADLLIKTLSAQISRLYNLGARKMVLAGSGPLGCIPSQLSMVTGNNTSGCVTKINNMVSMFNSRLKDLANTLNTTLPGSFFVYQNVFDLFHDMVVNPSRYGLVVSNEACCGNGRYGGALTCLPLQQPCLDRNQYVFWDAFHPTETANK 339          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GDL14_ARATH (GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.991e-31
Identity = 72/188 (38.30%), Postives = 99/188 (52.66%), Query Frame = 1
Query:   43 ITLGGNDFVNNYYLVPFSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVNGECSVELQRAAD-LFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIASNLCPNRDLYAFWDPFHPSEKATESSFSELRLAQAST 603
            + +G ND++NNY++  F + SRQ++   Y   LIS YR  L  +Y  GAR+  + G G +GC P  LAQ   +G   VE   +A+ +FN +L+ M+ +LN+      F   NA+    D I +P AYGF  +  ACCG G   G   C      C NRD Y FWD FHPS  A  +       AQ S+
Sbjct:  164 VGMGSNDYLNNYFMPQFYSTSRQYTPEQYADDLISRYRDQLNALYNYGARKFALVGIGAIGCSPNALAQGSQDGTTCVERINSANRIFNNRLISMVQQLNNAHSDASFTYINAYGAFQDIIANPSAYGFTNTNTACCGIGRNGGQLTCLPGEPPCLNRDEYVFWDAFHPSAAANTAIAKRSYNAQRSS 351          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GDL38_ARATH (GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.097e-29
Identity = 68/183 (37.16%), Postives = 104/183 (56.83%), Query Frame = 1
Query:   19 ISNPALVLITLGGNDFVNNYYLVPFSARSRQFSLPD-YVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVN-GECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQG-PYNGIGLCTIASNLCPNRDLYAFWDPFHPSEKA 558
            I+  ++  IT+G NDF+NNY     S  +R    PD ++  ++   R  L R+Y+L AR+ ++   GP+GC+P +     ++  EC     + A+ +N +L  +L ELN ++   +FV AN + + M+ I +   YGF ++  ACCG G  Y GI  C   S+LC  RD Y FWDP+HPSE A
Sbjct:  178 IAKKSIFSITIGANDFLNNYLFPLLSVGTRFTQTPDDFIGDMLEHLRDQLTRLYQLDARKFVIGNVGPIGCIPYQKTINQLDENECVDLANKLANQYNVRLKSLLEELNKKLPGAMFVHANVYDLVMELITNYDKYGFKSATKACCGNGGQYAGIIPCGPTSSLCEERDKYVFWDPYHPSEAA 360          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GDL28_ARATH (GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana GN=At1g71250 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.101e-29
Identity = 62/178 (34.83%), Postives = 98/178 (55.06%), Query Frame = 1
Query:   31 ALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVN--GECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIASNLCPNRDLYAFWDPFHPSEKA 558
            +LV++  G ND++NNY +      S +F  PD+   L+S+Y + L  +Y LG R++ + G  PLGC+P + A RG++    C   + +    FN  L  ++++LN +    ++V  N ++   D +++P AYGF     ACCG G   G   C      CPNR+ Y FWD FHP++ A
Sbjct:  170 SLVVLVFGSNDYINNYLMPNLYDSSIRFRPPDFANLLLSQYARQLLTLYSLGLRKIFIPGVAPLGCIPNQRA-RGISPPDRCVDSVNQILGTFNQGLKSLVDQLNQRSPGAIYVYGNTYSAIGDILNNPAAYGFSVVDRACCGIGRNQGQITCLPLQTPCPNRNQYVFWDAFHPTQTA 346          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GDL64_ARATH (GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 7.968e-29
Identity = 65/184 (35.33%), Postives = 100/184 (54.35%), Query Frame = 1
Query:   16 KISNPALVLITLGGNDFVNNYYLVPFSARSRQFSLPD-YVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAEL-AQRGVNGECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCG-QGPYNGIGLCTIASNLCPNRDLYAFWDPFHPSEKA 558
            K+   A+  +T G ND +NNY+    S   R+   P+ +V  +IS++R  L R+Y+LGAR+++V   GP+GC+P E  +       C  E    A ++N +L  ++ ELN  +    FV  + F +  D I +  +YGF + KI CC   G   G+  C   S +C +R  Y FWDP+HP+E A
Sbjct:  154 KLFRSAIFSVTTGSNDLINNYFTPVISTLQRKVVAPEVFVDTMISKFRLQLTRLYQLGARKIVVINIGPIGCIPFERESDPAAGNNCLAEPNEVAQMYNLKLKTLVEELNKNLQGSRFVYGDVFRIVDDIIQNYSSYGFESEKIPCCSLVGKVGGLIPCGPPSKVCMDRSKYVFWDPYHPTEAA 337          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GDL82_ARATH (GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana GN=At5g45670 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.775e-28
Identity = 64/173 (36.99%), Postives = 89/173 (51.45%), Query Frame = 1
Query:   43 ITLGGNDFVNNYYLVPFSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVNGE-CSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIASNLCPNRDLYAFWDPFHPSEKA 558
            I LG ND++NNY++  F +   QFS   Y   L++ Y + L  +Y  GAR+  + G G +GC P ELAQ   +G  C   +  A  +FN +L+ +++  N       F   NA+ +  D I +P  YGF  +   CCG G  NG   C      C NR+ Y FWD FHP E A
Sbjct:  162 IGLGSNDYLNNYFMPTFYSTGNQFSPESYADDLVARYTEQLRVLYTNGARKFALIGVGAIGCSPNELAQNSRDGRTCDERINSANRIFNSKLISIVDAFNQNTPDAKFTYINAYGIFQDIITNPARYGFRVTNAGCCGVGRNNGQITCLPGQAPCLNRNEYVFWDAFHPGEAA 334          
The following BLAST results are available for this feature:
BLAST of CX290584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
GDL79_ARATH3.091e-9280.22GDSL esterase/lipase At5g33370 OS=Arabidopsis thal... [more]
LTL1_ARATH1.533e-8574.59GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]
GDL77_ARATH4.859e-7869.78GDSL esterase/lipase At5g18430 OS=Arabidopsis thal... [more]
GDL67_ARATH2.853e-7567.76GDSL esterase/lipase At4g28780 OS=Arabidopsis thal... [more]
GLIP7_ARATH2.240e-3135.56GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=... [more]
GDL14_ARATH4.991e-3138.30GDSL esterase/lipase At1g29660 OS=Arabidopsis thal... [more]
GDL38_ARATH2.097e-2937.16GDSL esterase/lipase At2g23540 OS=Arabidopsis thal... [more]
GDL28_ARATH6.101e-2934.83GDSL esterase/lipase At1g71250 OS=Arabidopsis thal... [more]
GDL64_ARATH7.968e-2935.33GDSL esterase/lipase At4g16230 OS=Arabidopsis thal... [more]
GDL82_ARATH1.775e-2836.99GDSL esterase/lipase At5g45670 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC02025G08SK IF1 Citrus clementina cDNA clone C02025G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290584 ID=CX290584; Name=CX290584; organism=Citrus clementina; type=EST; length=656bp
AGCTGAGCAGACTGAAAGATTAGTAACCCAGCACTTGTCCTAATTACGCT
TGGGGGCAACGACTTTGTTAACAACTACTACTTGGTGCCGTTTTCTGCAA
GATCTCGCCAATTTTCTCTTCCAGATTATGTTGTGTATCTAATCTCAGAG
TATCGCAAAATTCTGGCGAGGATATATGAACTTGGCGCCCGTAGGGTTTT
GGTGACGGGCACAGGACCATTGGGTTGCGTCCCAGCAGAGCTTGCACAGC
GTGGCGTAAATGGTGAATGTTCAGTAGAACTGCAACGGGCAGCTGATTTG
TTCAACCCACAACTCGTTCAAATGTTAAATGAACTCAATAGTCAGATCGG
ATCTGACGTTTTTGTTGCTGCTAATGCCTTCGCAATGCACATGGATTTCA
TCCATGACCCTCAAGCTTACGGATTTGTTACCTCAAAAATAGCATGTTGC
GGACAAGGACCCTACAATGGCATAGGCCTCTGCACAATTGCATCAAACTT
ATGCCCCAACAGGGATTTGTACGCGTTTTGGGATCCGTTCCATCCATCGG
AGAAAGCAACAGAATCATCGTTCAGCGAATTGCGTCTGGCTCAAGCAAGT
ACATGAACCCAATGAATCTCAGCACCATTATGGCTTTAGATTCAAGGGTC
TAATTT
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