CX290585
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290585 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 7.846e-34 Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 3 Query: 453 MYLKDIVLK-SESRNDDHGVKITCNSWLQPK---EENTPT-RIFFANKSYLPSATPDGLKRLRRQELRHLQGDGRGVRQLSDRIYDYDV 704 M+L+DI L S+ + + I CNSW+QPK +E TP+ RIFFANK+YLP TP GL+ R+ +L+ +GDG G R+ DR+YDYDV Sbjct: 177 MFLEDINLTASDGAGNSTVLPIRCNSWVQPKSVGDEGTPSKRIFFANKTYLPGQTPAGLRSYRKNDLQQKRGDGTGEREADDRVYDYDV 265 HSP 2 Score: 77.411 bits (189), Expect = 7.846e-34 Identity = 48/122 (39.34%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 82 SSSSHKKGPNERAGSAAAVNNIKAIATSKRTLIDNVTAVITVKSNSSLKDEIDESFLFGKSFSLELVSTKLDHKTGSEKTTKPSHAIRVGNDKEGNYLYESKFNVPFDFGEVGAIYVENEHR 447 SS++ +G + +AAA +KA+AT K T+ + + I ++ L G+S SLELVS++LD KTG EK T S+A V +D YE+ F+VP FG +GAI V NE R Sbjct: 65 SSATASRGDSSSDMAAAAAVRVKAVATIKVTVGELINRSIDIRD------------LIGRSLSLELVSSELDAKTGKEKATVRSYAHNVDDDDHSVVTYEADFDVPSGFGPIGAIIVTNELR 174
BLAST of CX290585 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.097e-30 Identity = 41/89 (46.07%), Postives = 59/89 (66.29%), Query Frame = 3 Query: 453 MYLKDIVLKS-ESRNDDHGVKITCNSWLQPK---EENTP-TRIFFANKSYLPSATPDGLKRLRRQELRHLQGDGRGVRQLSDRIYDYDV 704 M+L+D+ L + + + + I CNSW+QPK +E TP RIFFA K+YLP TP GL+ R ++L+ +G+G G R+ DR+YDYDV Sbjct: 195 MFLEDLNLTAGDGAGNSTVLPIRCNSWVQPKSSIDEGTPGKRIFFA-KAYLPGQTPAGLRSYREEDLKQKRGNGAGQREADDRVYDYDV 282 HSP 2 Score: 75.0998 bits (183), Expect = 8.097e-30 Identity = 44/120 (36.67%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 82 SSSSHKKGPNERAGSAAAVNNIKAIATSKRTLIDNVTAVITVKSNSSLKDEIDESFLFGKSFSLELVSTKLDHKTGSEKTTKPSHAIRVGNDKEGNYLYESKFNVPFDFGEVGAIYVENE 441 +S + ++G + AAV +KA+AT K T+ + ++ K+ +++D L G+S LELVS++L+ KTG +K T S+A +V +D G YE+ F+VP FG +GA+ V NE Sbjct: 77 ASEAARRGTGSSDMAPAAVVKVKAVATIKVTVEGLLNSLRPSKAIDNIRD------LIGRSLFLELVSSELEAKTGKKKATVHSYAHKVDDDDHGVVTYEADFDVPTGFGPIGAVVVTNE 190
BLAST of CX290585 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.227e-25 Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 3 Query: 453 MYLKDIVLKSESRNDDHGVKITCNSWLQPKEENTPTRIFFANKSYLPSATPDGLKRLRRQELRHLQGDGRGVRQLSDRIYDYD 701 M++KDI L + ++ + SW+ K ++ R FF KSYLPS TP G++ LR++EL L+GDG R+ +R+YDYD Sbjct: 160 MFIKDIKLITGG-DESTAITFDVASWVHSKFDDPEPRAFFTVKSYLPSQTPPGIEALRKKELETLRGDGHSERKFHERVYDYD 241 HSP 2 Score: 65.0846 bits (157), Expect = 5.227e-25 Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 1 Query: 118 AGSAAAVNNIKAIATSKRTLIDNVTAVITVKSNSSLK-----DEIDESFLFGKSFSLELVSTKLDHKTGSEKTTKPSHAIRVGNDKEGNYLYESKFNVPFDFGEVGAIYVENEH 444 A + AV ++ T +R L VTA++T + +S+ D+I + LFGK+ LELVS++LD KTG E+ A KEG Y E+K +VP FG VGA+ VENEH Sbjct: 51 ASTEEAVGVSTSVTTKERAL--TVTAIVTAQVPTSVYVARGLDDIQD--LFGKTLLLELVSSELDPKTGRERERVKGFAHMTL--KEGTY--EAKMSVPASFGPVGAVLVENEH 156
BLAST of CX290585 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.499e-24 Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 507 VKITCNSWLQPKEENTPTRIFFANKSYLPSATPDGLKRLRRQELRHLQGDGRGVRQLSDRIYDY 698 V CNSW+Q E R+FF+NK YLPS TP GL+ LR +EL+ L+GDG GVR+LSDRIYDY Sbjct: 196 VHFACNSWVQSTRELPTKRVFFSNKPYLPSETPPGLRELREKELKDLRGDGTGVRKLSDRIYDY 259 HSP 2 Score: 47.3654 bits (111), Expect = 1.499e-24 Identity = 40/152 (26.32%), Postives = 66/152 (43.42%), Query Frame = 1 Query: 40 PFLHGNNHGFRQIESSSSHKKGPNERAGSAAAVNNIKAIATSKRTLIDNVTAVITVKSNSSLKDEIDESF---------LFGKSFSLELVSTKLDHKTGSEKTTKPSHAIRVG--------NDKEGNYLYESKFNVPFDFGEVGAIYVENEH 444 P L G HG R++ ++ ++ P A ++ + A +R + V + K++I E+ + G++ LEL+STK+ +T KP + RV K + +Y ++F V DFGE GAI V N H Sbjct: 31 PLLPGERHGRRKVVVAAISEEVPRLAASPSSGIKG--GGAGERRPAPEKVALRAALTVRRKQKEDIKEAVAGHLDALWDMVGRNVVLELISTKIH-----PRTKKPMQSGRVSIKDWCQKRGAKGDHVVYTAEFTVDADFGEPGAIAVANRH 175
BLAST of CX290585 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 2.539e-24 Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 3 Query: 456 YLKDIVLKSESRNDDHGVKITCNSWLQPKEENTPTRIFFANKSYLPSATPDGLKRLRRQELRHLQGDGRGVRQLSDRIYDYDV 704 Y++ IV++ H TCNSW+QP + R+FF+N+ YLPS TP GL+ LR +EL L+GDG G R+++DR+YDYDV Sbjct: 168 YIESIVVEGFPTGPAH---FTCNSWVQPTRVSRDRRVFFSNRPYLPSETPPGLRELRLRELADLRGDGTGERRITDRVYDYDV 247 HSP 2 Score: 45.4394 bits (106), Expect = 2.539e-24 Identity = 33/95 (34.74%), Postives = 48/95 (50.53%), Query Frame = 1 Query: 193 AVITVKSN--SSLKDEIDESF-----LFGKSFSLELVSTKLDHKTGSEKTTKPSHAIRVGNDKE---GNYLYESKFNVPFDFGEVGAIYVENEHR 447 AV+TV+ KD E G+S LELVST+ D + G+ K +KPS + + K+ +Y ++F V FGE GA+ V N H+ Sbjct: 70 AVVTVRRRRKEDAKDRFAEQLDALADRVGRSVLLELVSTETDPRKGTPKKSKPSALVGWFDKKDVKAERVVYTAEFAVDAGFGEPGAVTVLNRHQ 164
BLAST of CX290585 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 4.594e-23 Identity = 38/66 (57.58%), Postives = 52/66 (78.79%), Query Frame = 3 Query: 507 VKITCNSWLQPKEENTPTRIFFANKSYLPSATPDGLKRLRRQELRHLQGDGRGVRQLSDRIYDYDV 704 V CNSW+Q ++++ RIFF N+ YLP+ TP GL+ LR +EL++L+GDG GVR+LSDRIYD+DV Sbjct: 200 VHFPCNSWVQSQKDHPDKRIFFTNQPYLPNETPSGLRVLREKELKNLRGDGSGVRKLSDRIYDFDV 265 HSP 2 Score: 41.5874 bits (96), Expect = 4.594e-23 Identity = 33/102 (32.35%), Postives = 52/102 (50.98%), Query Frame = 1 Query: 187 VTAVITVKSNSSLKDEIDESFL---------FGKSFSLELVSTKLDHKTGSEKTTKPSHAI------RVGNDKEGNYLYESKFNVPFDFGEVGAIYVENEHR 447 V AV+TV++ + K+++ E+ + G++ LEL+ST+LD KT K K S+A + K Y ++F V FG GAI V N+H+ Sbjct: 86 VRAVVTVRNKN--KEDLKETLVKHLDAFADKIGRNIVLELISTQLDPKT---KLPKKSNAAVLKDWSKKSKTKAERVHYTAEFTVDAAFGSPGAITVMNKHQ 182
BLAST of CX290585 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.713e-22 Identity = 37/66 (56.06%), Postives = 50/66 (75.76%), Query Frame = 3 Query: 507 VKITCNSWLQPKEENTPTRIFFANKSYLPSATPDGLKRLRRQELRHLQGDGRGVRQLSDRIYDYDV 704 V CNSW+Q ++++ RI F N+ YLPS TP GL+ LR +EL +L+G+G+G R+LSDRIYDYDV Sbjct: 206 VHFPCNSWVQSQKDHPSKRILFTNQPYLPSETPSGLRTLREKELENLRGNGKGERKLSDRIYDYDV 271 HSP 2 Score: 42.3578 bits (98), Expect = 1.713e-22 Identity = 34/129 (26.36%), Postives = 60/129 (46.51%), Query Frame = 1 Query: 70 RQIESSSSHKKGPNERAGSAAAVNNIKAIATSKRTLIDNVTAVITVKSNSSLKDEIDESFLFGKSFSLELVSTKLDHKTGSEKTTKPSHA---IRVGNDKEGNYLYESKFNVPFDFGEVGAIYVENEHR 447 + + S+ +K E + ++A+AT + ++ + VK + D+I G++ LEL+ST++D KT K +K + + N K Y ++F V FG GAI V N+H+ Sbjct: 67 KTLRISTVGRKQEKEEEEEKSVKFKVRAVATVRNKNKEDFKETL-VKHLDAFTDKI------GRNVVLELMSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAERVHYTAEFTVDSAFGSPGAITVTNKHQ 188
BLAST of CX290585 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.864e-18 Identity = 33/70 (47.14%), Postives = 43/70 (61.43%), Query Frame = 3 Query: 495 DDHGVKITCNSWLQPKEENTPTRIFFANKSYLPSATPDGLKRLRRQELRHLQGDGRGVRQLSDRIYDYDV 704 ++ V C SW+ P R+FF SYLPS TP G++ LR++EL L+G G G R+ DRIYDYDV Sbjct: 191 EESAVTFHCKSWIDPSHCTPDKRVFFPAHSYLPSQTPKGVEGLRKRELEILRGTGCGERKEHDRIYDYDV 260 HSP 2 Score: 42.3578 bits (98), Expect = 2.864e-18 Identity = 34/117 (29.06%), Postives = 58/117 (49.57%), Query Frame = 1 Query: 121 GSAAAVNNIKAIATSKRTLIDNVTAVITVKSNSS------LKDEIDESFLFGKSFSLELVSTKLDHKTGSEK---TTKPSHAIRVGNDKEGNYLYESKFNVPFDFGEVGAIYVENEH 444 G+A + RT + A +TV + + L D I +++L ++LVS++LD +TG E+ + H+ RV ++ + +YE+ F VP FG +GA+ V N H Sbjct: 66 GAAVGTVTRPDVHVQDRTHATEMKATVTVHMSKAAGVRDFLYDLILKTWLH-----VDLVSSELDPQTGQEREPISGAVKHSGRVDDEWD---MYEATFKVPASFGPIGAVQVTNYH 174
BLAST of CX290585 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.845e-18 Identity = 39/87 (44.83%), Postives = 53/87 (60.92%), Query Frame = 3 Query: 453 MYLKDIVLKSESRNDDHGVKITCNSWLQPKEENTPTRIFFANKSYLPSATPDGLKRLRRQELRHLQGDGR---GVRQLSDRIYDYDV 704 ++LK + LK + + TC SW+ PK + RIFF++KSYLPS TP+ LK+ R++EL LQG R G +RIYDYDV Sbjct: 163 LFLKGVELKLPGGS----ITFTCESWVAPKSVDPTKRIFFSDKSYLPSQTPEPLKKYRKEELETLQGKNREEVGEFTKFERIYDYDV 245 HSP 2 Score: 39.2762 bits (90), Expect = 4.845e-18 Identity = 23/63 (36.51%), Postives = 36/63 (57.14%), Query Frame = 1 Query: 256 GKSFSLELVSTKLDHKTGSEKTTKPSHAIRVGNDKEGNYLYESKFNVPFDFGEVGAIYVENEH 444 G+S +EL+S K D ++ T +A RV + YE +F +P DFG VGAI ++N++ Sbjct: 103 GRSLLVELISAKTD-----QRITVEDYAQRVWAEAPDEK-YECEFEMPEDFGPVGAIKIQNQY 159
BLAST of CX290585 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.186e-18 Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 3 Query: 522 NSWLQPKEENTPTRIFFANKSYLPSATPDGLKRLRRQELRHLQGDGRGVRQLSDRIYDYDV 704 N+W+ K +N RI F ++ LPS TPDG+K LR ++L ++GDG+G R+ +RIYDYDV Sbjct: 199 NTWIHSKNDNPQARIIFRSQPCLPSETPDGIKELREKDLVSVRGDGKGERKPHERIYDYDV 259 HSP 2 Score: 41.2022 bits (95), Expect = 8.186e-18 Identity = 31/103 (30.10%), Postives = 53/103 (51.46%), Query Frame = 1 Query: 163 SKRTLIDNVTAVITVKSNSSLKDEIDESF---------LFGKSFSLELVSTKLDHKTGSEKTTKPSHAIRVGND-KEGNYL-YESKFNVPFDFGEVGAIYVEN 438 SK T VTAV+ ++ +K+++ E F G+ ++LVS ++D +TG + + S + + K+ YL + + F VP +FG+ GAI V N Sbjct: 74 SKYTGSKTVTAVVKIRKK--IKEKLTERFEHQLELFMKAIGQGMLIQLVSEEIDPETGKGRKSLESPVMGLPKAVKDPRYLVFTADFTVPINFGKPGAILVTN 174 The following BLAST results are available for this feature:
BLAST of CX290585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290585 ID=CX290585; Name=CX290585; organism=Citrus clementina; type=EST; length=704bpback to top |