CX290658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290658 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 307.76 bits (787), Expect = 3.404e-83 Identity = 140/179 (78.21%), Postives = 155/179 (86.59%), Query Frame = 3 Query: 132 LIQLCCLSVSIKAFSPSGWTQAHATFYGGSDASGTMGGACGYGNLYSTGYGISTAALSTALFNDGASCGQCYRIMCDYKSDTRWCIKGTSVTITATNFCPPNFALPSDNGGWCNPPRQHFDMAYPAWQKIGIYRGGIVPVLYQRVPCKKPGGVRFTINGRDYFELVLISNVAGAGSIKS 668 L+ C L +F+ SGW +A ATFYGGSDASGTMGGACGYG+LYSTGYG +TAALST LFNDGASCGQCYRIMCDY++D R+CI GTSVTITATN CPPN+ALP+D GGWCNPPRQHFDMA PAW KIG+Y GGIVPV+YQRVPC K GGVRFTINGRDYFELVL+SNV G GSI+S Sbjct: 16 LLATCLLWNEAASFTASGWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQS 194
BLAST of CX290658 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 2.881e-82 Identity = 141/189 (74.60%), Postives = 159/189 (84.13%), Query Frame = 3 Query: 102 MAKTLLTSAILIQLCCLSVSIKAFSPSGWTQAHATFYGGSDASGTMGGACGYGNLYSTGYGISTAALSTALFNDGASCGQCYRIMCDYKSDTRWCIKGTSVTITATNFCPPNFALPSDNGGWCNPPRQHFDMAYPAWQKIGIYRGGIVPVLYQRVPCKKPGGVRFTINGRDYFELVLISNVAGAGSIKS 668 M+K+L A+L L +++ AF PSG T HATFYGGSDASGTMGGACGYG+LYS GYG TAALSTALFNDGASCG+CYRI CD+ +D+RWC+KG SV ITATNFCPPNFALP++NGGWCNPP +HFDMA PAW+KIGIYRGGIVPV++QRV C K GGVRF INGRDYFELV I NV GAGSIKS Sbjct: 1 MSKSLAGLAVL---AALFIAVDAFRPSGLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKS 186
BLAST of CX290658 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 295.819 bits (756), Expect = 1.338e-79 Identity = 131/181 (72.38%), Postives = 151/181 (83.43%), Query Frame = 3 Query: 126 AILIQLCCLSVSIKAFSPSGWTQAHATFYGGSDASGTMGGACGYGNLYSTGYGISTAALSTALFNDGASCGQCYRIMCDYKSDTRWCIKGTSVTITATNFCPPNFALPSDNGGWCNPPRQHFDMAYPAWQKIGIYRGGIVPVLYQRVPCKKPGGVRFTINGRDYFELVLISNVAGAGSIKS 668 AI+ + + A PSGW +AHATFYGG+DASGTMGGACGYGNLY+ GYG TAALSTALFNDG +CGQCY+++CD K+D WC G SVTITATNFCPPN+ LPSD+GGWCNPPR HFDMA PAW+KIGIYRGGI+PV+YQRVPC K GGVRFTING DYF+LVL++NV AGSIK+ Sbjct: 14 AIMPAAAMAAGGVGALEPSGWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKA 194
BLAST of CX290658 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 293.893 bits (751), Expect = 5.086e-79 Identity = 127/176 (72.16%), Postives = 153/176 (86.93%), Query Frame = 3 Query: 141 LCCLSVSIKAFSPSGWTQAHATFYGGSDASGTMGGACGYGNLYSTGYGISTAALSTALFNDGASCGQCYRIMCDYKSDTRWCIKGTSVTITATNFCPPNFALPSDNGGWCNPPRQHFDMAYPAWQKIGIYRGGIVPVLYQRVPCKKPGGVRFTINGRDYFELVLISNVAGAGSIKS 668 L S +++AF+ SGW++ ATFYGGSDASGTMGGACGYGNLY+ GYG TAALSTALF+DGASCGQCY + CD ++D RWC G SVT+TATNFCPPN+ALPSD+GGWCNPPR HFDMA PAW++IG+YRGGIVPV ++RVPC++ GGVRFT+ GRDYFELVL++NVA AGS++S Sbjct: 19 LAAASTTVEAFAASGWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRS 194
BLAST of CX290658 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 285.804 bits (730), Expect = 1.385e-76 Identity = 126/165 (76.36%), Postives = 142/165 (86.06%), Query Frame = 3 Query: 174 SPSGWTQAHATFYGGSDASGTMGGACGYGNLYSTGYGISTAALSTALFNDGASCGQCYRIMCDYKSDTRWCIKGTSVTITATNFCPPNFALPSDNGGWCNPPRQHFDMAYPAWQKIGIYRGGIVPVLYQRVPCKKPGGVRFTINGRDYFELVLISNVAGAGSIKS 668 +P+ W +AHATFYGG+DASGTMGGACGYGNLYS GYG AALSTALFNDGASCGQCY+I CD K +WC G +VTITATNFCPPN+ LPSDNGGWCNPPR HFDMA PAW+KIG+Y GI+PV+YQRVPC K GG+RFTING DYF+LVL++NVA AGSIKS Sbjct: 35 APTQWQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKS 199
BLAST of CX290658 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 281.182 bits (718), Expect = 3.412e-75 Identity = 126/165 (76.36%), Postives = 139/165 (84.24%), Query Frame = 3 Query: 174 SPSGWTQAHATFYGGSDASGTMGGACGYGNLYSTGYGISTAALSTALFNDGASCGQCYRIMCDYKSDTRWCIKGTSVTITATNFCPPNFALPSDNGGWCNPPRQHFDMAYPAWQKIGIYRGGIVPVLYQRVPCKKPGGVRFTINGRDYFELVLISNVAGAGSIKS 668 +P W +AHATFYGG+DASGTMGGACGYG+LYS GYG AALSTALFNDGASCGQCY+I CD K +WC G +VTITATNFCPPN+ LPSDNGGWCNPPR HFDMA PAW+KIGIYR GI+PV+YQRVPC K GGVRFTING DYF LVL++NVA G IKS Sbjct: 48 APPVWLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKS 212
BLAST of CX290658 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 279.641 bits (714), Expect = 9.926e-75 Identity = 125/165 (75.76%), Postives = 139/165 (84.24%), Query Frame = 3 Query: 174 SPSGWTQAHATFYGGSDASGTMGGACGYGNLYSTGYGISTAALSTALFNDGASCGQCYRIMCDYKSDTRWCIKGTSVTITATNFCPPNFALPSDNGGWCNPPRQHFDMAYPAWQKIGIYRGGIVPVLYQRVPCKKPGGVRFTINGRDYFELVLISNVAGAGSIKS 668 +P W +AHATFYGG+DASGTMGGACGY +LYS GYG AALSTALFNDGASCGQCY+I CD K +WC G +VT+TATNFCPPN+ LPSDNGGWCNPPR HFDMA PAW+KIGIYR GI+PV+YQRVPC K GGVRFTING DYF LVL++NVA GSIKS Sbjct: 46 TPPVWLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKS 210
BLAST of CX290658 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 279.641 bits (714), Expect = 9.926e-75 Identity = 130/188 (69.15%), Postives = 145/188 (77.13%), Query Frame = 3 Query: 105 AKTLLTSAILIQLCCLSVSIKAFSPSGWTQAHATFYGGSDASGTMGGACGYGNLYSTGYGISTAALSTALFNDGASCGQCYRIMCDYKSDTRWCIKGTSVTITATNFCPPNFALPSDNGGWCNPPRQHFDMAYPAWQKIGIYRGGIVPVLYQRVPCKKPGGVRFTINGRDYFELVLISNVAGAGSIKS 668 A L+ AI C + +P W +AHATFYGG+DASGTMGG CGYG+LYS GYG AALSTALFNDGASCGQCY+I CD K +WC G +VTITATNFCPPN+ LPSDNGGWCNPPR HFDMA PAW+KIGIY GI+PV+YQRVPC K GGVRFTING DYF LVL++NVA GSIKS Sbjct: 7 AFALVFFAIAAVGCTQLTTADDAAPPVWQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKS 194
BLAST of CX290658 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 278.485 bits (711), Expect = 2.211e-74 Identity = 127/194 (65.46%), Postives = 160/194 (82.47%), Query Frame = 3 Query: 87 LFEKEMAKTLLTSAILIQLCCLSVSIKAFSPSGWTQAHATFYGGSDASGTMGGACGYGNLYSTGYGISTAALSTALFNDGASCGQCYRIMCDYKSDTRWCIKGTSVTITATNFCPPNFALPSDNGGWCNPPRQHFDMAYPAWQKIGIYRGGIVPVLYQRVPCKKPGGVRFTINGRDYFELVLISNVAGAGSIKS 668 +++K+ ++L ++I + S+ A + +GW+ ATFYGGSDASGTMGGACGYGNLY +GYG +TAALS+ALFNDGASCGQCY+I CD++++ RWC++G +VTIT TN CPPN+AL S++GGWCNPPR HFDMA PAW +IGIY+ GIVPVLYQRVPC K GGVRFT+ G +YFELVLISNVAG+GSI+S Sbjct: 3 MWKKKKTPSILPLVVVIA----AASLIAPTTAGWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQS 192
BLAST of CX290658 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 3.903e-71 Identity = 123/174 (70.69%), Postives = 147/174 (84.48%), Query Frame = 3 Query: 147 CLSVSIKAFSPSGWTQAHATFYGGSDASGTMGGACGYGNLYSTGYGISTAALSTALFNDGASCGQCYRIMCDYKSDTRWCIKGTSVTITATNFCPPNFALPSDNGGWCNPPRQHFDMAYPAWQKIGIYRGGIVPVLYQRVPCKKPGGVRFTINGRDYFELVLISNVAGAGSIKS 668 C++ + A S + ATFYGGSDASGTMGGACGYGNLYSTGYG +TAALS+ALFNDGA+CG+CY+I CD +S+++WC GTSVTITATN CPP+++ PS++GGWCNPPRQHFDMA PAW++IG+YRGGIVPV +QRV C + GGVRFTING YFELVLI+NV G GSIKS Sbjct: 17 CIAATAAALSGT------ATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCD-QSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKS 183 The following BLAST results are available for this feature:
BLAST of CX290658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290658 ID=CX290658; Name=CX290658; organism=Citrus clementina; type=EST; length=671bpback to top |