CX290673

Overview
NameCX290673
Unique NameCX290673
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290673 vs. ExPASy Swiss-Prot
Match: JMT_ARATH (Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 7.629e-31
Identity = 72/169 (42.60%), Postives = 96/169 (56.80%), Query Frame = 1
Query:   88 MQVEQVLFMNGGEGDNSYANNSAPSREATLKTKPLLHESLFDLYC-NGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFG-----SCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRVP 576
            M+V +VL MN G G+ SYA NS          + ++ E+L  L   N     I   D+GCSSGPN+ L    +++ +  +C  L    P L   LNDLP NDFN +  SLP FY+R+   +    FG     SCF++A PGSF+GRLFP   L+ V+SS  LHWLS+VP
Sbjct:    1 MEVMRVLHMNKGNGETSYAKNSTAQSNIISLGRRVMDEALKKLMMSNSEISSIGIADLGCSSGPNSLLSISNIVDTIHNLCPDLDRPVPELRVSLNDLPSNDFNYICASLPEFYDRVNNNKEGLGFGRGGGESCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVP 169          
BLAST of CX290673 vs. ExPASy Swiss-Prot
Match: JMT_BRARP (Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.102e-29
Identity = 71/173 (41.04%), Postives = 96/173 (55.49%), Query Frame = 1
Query:   88 MQVEQVLFMNGGEGDNSYANNSAPSREATLKTKPLLHESLFDLYCNGFPDCIRF--TDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERG--------HDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRVP 576
            M+V ++L MN G G+ SYA NS          + ++ E+L  L      + + F   D+GCSSGPN+ L    ++E +  +C  L    P L   LNDLP NDFN +  SLP FY+R+K            H   G CF++A PGSF+GRLFP   L+ V+SS  LHWLS+VP
Sbjct:    1 MEVMRILHMNKGNGETSYAKNSIVQSNIISLGRRVMDEALKKLMIRN-SEILSFGIADLGCSSGPNSLLSISNIVETIQNLCHDLDRPVPELSLSLNDLPSNDFNYIFASLPEFYDRVKKRDNNYESLGFEHGSGGPCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVP 172          
BLAST of CX290673 vs. ExPASy Swiss-Prot
Match: BAMT_ANTMA (Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.729e-27
Identity = 68/168 (40.48%), Postives = 99/168 (58.93%), Query Frame = 1
Query:   94 VEQVLFMN-GGEGDNSYANNSAPSREATLKTKPLLHESLFDLYCN--GFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLK-HKPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRVPKEL 585
            ++++L MN  G+G+ SYANNS   +    K+  +L E+L D+  +  GFP C +  DMGCSSGPNA L    +I  ++ + +    ++ P    FLNDLP NDFN + K L            H++ G+CF+   PGSF+GRL P   L+  YSS+ +HWLS+VP+ L
Sbjct:    4 MKKLLCMNIAGDGETSYANNSGLQKVMMSKSLHVLDETLKDIIGDHVGFPKCFKMMDMGCSSGPNALLVMSGIINTIEDLYTEKNINELPEFEVFLNDLPDNDFNNLFKLL-----------SHEN-GNCFVYGLPGSFYGRLLPKKSLHFAYSSYSIHWLSQVPEGL 159          
BLAST of CX290673 vs. ExPASy Swiss-Prot
Match: MT797_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana GN=At5g37970 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.342e-18
Identity = 62/181 (34.25%), Postives = 88/181 (48.62%), Query Frame = 1
Query:  112 MNGGEGDNSYANNSAPSREATLKTKPLLHESLFD------LYCNGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFL------NDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRVPKELVSECGIPLLNK 618
            MNGG+G +SY +NS+  + A    K    E++ +      L  N   + +R  D GCS GPN F     +I+ +     RLK     + A L      ND P NDFNT+ ++ P F  +             F    PGSFHGR+ P   L++ ++S+ LHWLS VP+  V +   P LNK
Sbjct:   10 MNGGDGPHSYIHNSSYQKVAIDGVKERTSEAILEKLDLEFLNRNSEENILRIVDFGCSIGPNTFDVVQNIIDTVKQ--KRLKENKTYIGAPLEFQVCFNDQPNNDFNTLFRTQPFFSRK-----------EYFSVGVPGSFHGRVLPKNSLHIGHTSYTLHWLSNVPQH-VCDKKSPALNK 176          
BLAST of CX290673 vs. ExPASy Swiss-Prot
Match: MT799_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37990 OS=Arabidopsis thaliana GN=At5g37990 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.017e-15
Identity = 59/181 (32.60%), Postives = 88/181 (48.62%), Query Frame = 1
Query:  112 MNGGEGDNSYANNSAPSREATLKTKPLLHESLFD------LYCNGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHKPPILHAFL------NDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRVPKELVSECGIPLLNK 618
            MNGG+G +SY +NS+  + A    K    E++        L  N   + +R  D GCS GPN F     +I+ +      LK     + A L      ND P NDFNT+ ++ P     + +++ +   G       PGSFHGR+ P   L++ + ++ LHWLS VP+  V +   P LNK
Sbjct:   10 MNGGDGPHSYIHNSSYQKVAIDGAKEKTSEAILKNLDLELLNRNSDENILRIADFGCSIGPNTFEVVQNIIDTVKQ--KNLKENNAYIGAPLEFQVCFNDQPNNDFNTLFRTQP-----ISSKQAYLSVG------VPGSFHGRVLPKNSLHIGHITYALHWLSTVPQH-VCDKKSPALNK 176          
BLAST of CX290673 vs. ExPASy Swiss-Prot
Match: MT810_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38100 OS=Arabidopsis thaliana GN=At5g38100 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.804e-14
Identity = 54/165 (32.73%), Postives = 80/165 (48.48%), Query Frame = 1
Query:  112 MNGGEGDNSYANNSAPSR----EATLKTKPLLHESLFDLYCNGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKHK------PPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRVP 576
            M+ G   +SY +NS+  +     A  KT+  + E L DL  +      R  D GCS GPN F     +I+ + +   RL+        P     F ND P NDFNT+ ++ P     L  ER +      F    PGSF+GR+ P   +++ ++S+  HWLS+VP
Sbjct:   10 MSSGHDQHSYIHNSSYQKAAISSAVEKTRRCIFEKL-DLQLSSDFGTFRIADFGCSIGPNTFHVAQSIIDTVKS--KRLEESTENSLVPLEFQVFFNDQPTNDFNTLFRTQP-----LSPEREY------FSVGVPGSFYGRVLPRNSIHIGHTSYTTHWLSKVP 160          
BLAST of CX290673 vs. ExPASy Swiss-Prot
Match: MT878_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana GN=At5g38780 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.968e-14
Identity = 52/172 (30.23%), Postives = 80/172 (46.51%), Query Frame = 1
Query:  112 MNGGEGDNSYANNSAPSREAT----LKTKPLLHESLFDLYCNGFPDCIRFTDMGCSSGPNAFLPTLQVIEALDTICSRLKH----------KPPILHAFLNDLPGNDFNTVSKSLPSFYERLKTERGHDDFGSCFIAAAPGSFHGRLFPPCFLNLVYSSFCLHWLSRVPKEL 585
            M+GG+  +SY +NS+  +        K +  + E+L  L  N         D GCS GPN F     +I+ +     +LKH           P     + NDLP NDFNT+ ++ P   ++             F    PGSF+GR+ P   +++  +SF  HWLS+VP+E+
Sbjct:   10 MSGGDDQHSYIHNSSYQKAGIDGVQEKARQYILENLDLLNMNPNLSTFTIADFGCSIGPNTFHAVQNIIDIV-----KLKHLKESQEDSRVAPLEFQVYFNDLPNNDFNTLFRTQPPSSKQ-----------EYFSVGVPGSFYGRVLPRNSIHIGNTSFTTHWLSKVPEEV 165          
The following BLAST results are available for this feature:
BLAST of CX290673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
JMT_ARATH7.629e-3142.60Jasmonate O-methyltransferase OS=Arabidopsis thali... [more]
JMT_BRARP1.102e-2941.04Jasmonate O-methyltransferase OS=Brassica rapa sub... [more]
BAMT_ANTMA8.729e-2740.48Benzoate carboxyl methyltransferase OS=Antirrhinum... [more]
MT797_ARATH4.342e-1834.25Probable S-adenosylmethionine-dependent methyltran... [more]
MT799_ARATH2.017e-1532.60Probable S-adenosylmethionine-dependent methyltran... [more]
MT810_ARATH3.804e-1432.73Probable S-adenosylmethionine-dependent methyltran... [more]
MT878_ARATH4.968e-1430.23Probable S-adenosylmethionine-dependent methyltran... [more]
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Properties
Property NameValue
Genbank descriptionC02010B04SK IF1 Citrus clementina cDNA clone C02010B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290673 ID=CX290673; Name=CX290673; organism=Citrus clementina; type=EST; length=622bp
CNNNNNNNNNNNNNNNNNNNNNNNNGAAGATCATTCACTCAGATGAGAAG
CATGGAATTAGGGCAAGGTTCTAGCAAAAATGGAGCCATGCAAGTAGAAC
AAGTTCTGTTCATGAATGGAGGAGAAGGAGATAACAGCTATGCAAACAAC
TCAGCGCCATCGAGGGAGGCAACCTTGAAAACAAAGCCCCTACTGCATGA
AAGCTTGTTTGATTTGTATTGCAATGGCTTCCCAGATTGCATCAGATTTA
CAGATATGGGGTGTTCTTCAGGGCCTAATGCATTTTTGCCAACATTGCAA
GTTATAGAGGCACTGGACACTATTTGCAGCCGCTTGAAACATAAGCCACC
AATACTGCATGCTTTTCTCAATGATCTTCCTGGAAATGATTTCAATACCG
TTTCCAAATCTCTTCCAAGCTTTTATGAGAGATTGAAGACAGAGAGGGGC
CATGACGATTTTGGTTCATGTTTCATTGCTGCAGCCCCTGGATCTTTCCA
TGGAAGGCTATTTCCTCCGTGTTTCCTAAACTTGGTCTACTCTTCTTTCT
GTCTTCACTGGCTCTCTCGGGTGCCCAAAGAGCTAGTAAGTGAATGTGGA
ATTCCTTTATTAAATAAAAGGG
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