CX290764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290764 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.183e-75 Identity = 147/223 (65.92%), Postives = 173/223 (77.58%), Query Frame = 1 Query: 19 LLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----NGMWMPCGPKQSGAVQISMQEL 672 LLYGPPGTGKSYLAKAVATEA+STFFS+SSSDLVSKWMGESEKLV LF MARE+ PSIIFIDE+D+L G RGEG ESEASRRIKTELLVQM GVG++ Q VLVL ATN P+ LD AIRRRF++RIYIPLPDL AR MF++++GDTP LT+ D+ +L TEG+SGSDI+V VKD L +P+RK Q A F S PC P GA+++S ++ Sbjct: 170 LLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEG-ESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDI 391
BLAST of CX290764 vs. ExPASy Swiss-Prot
Match: VPS4B_MOUSE (Vacuolar protein sorting-associated protein 4B OS=Mus musculus GN=Vps4b PE=1 SV=2) HSP 1 Score: 282.337 bits (721), Expect = 1.545e-75 Identity = 146/230 (63.48%), Postives = 178/230 (77.39%), Query Frame = 1 Query: 19 LLYGPPGTGKSYLAKAVATEAD-STFFSISSSDLVSKWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----------NGMWMPCGPKQSGAVQISMQEL 672 LL+GPPGTGKSYLAKAVATEA+ STFFSISSSDLVSKW+GESEKLV +LFQ+ARE+ PSIIFIDEIDSLCG R E NESEA+RRIKTE LVQMQGVG ++ +LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++HLG T ++LTE+DF+ L RKT+G+SG+DIS+ V+D L +PVRK Q A F K N + PC P GA++++ ++ Sbjct: 171 LLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNCIVNDLLTPCSPGDPGAIEMTWMDV 399
BLAST of CX290764 vs. ExPASy Swiss-Prot
Match: VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus GN=Vps4a PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 3.443e-75 Identity = 143/230 (62.17%), Postives = 177/230 (76.96%), Query Frame = 1 Query: 19 LLYGPPGTGKSYLAKAVATEAD-STFFSISSSDLVSKWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----------NGMWMPCGPKQSGAVQISMQEL 672 LL+GPPGTGKSYLAKAVATEA+ STFFS+SSSDL+SKW+GESEKLV +LF++AR+ PSIIFIDE+DSLCG R E NESEA+RRIKTE LVQMQGVG+N+ LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++HLG TPHNLT+++ LARKTEG+SG+DIS+ V+D L +PVRK Q A F K + + PC P GA++++ ++ Sbjct: 164 LLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE-NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCGPSRTNPSVMIDDLLTPCSPGDPGAIEMTWMDV 392
BLAST of CX290764 vs. ExPASy Swiss-Prot
Match: VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus GN=Vps4a PE=1 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 3.443e-75 Identity = 143/230 (62.17%), Postives = 177/230 (76.96%), Query Frame = 1 Query: 19 LLYGPPGTGKSYLAKAVATEAD-STFFSISSSDLVSKWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----------NGMWMPCGPKQSGAVQISMQEL 672 LL+GPPGTGKSYLAKAVATEA+ STFFS+SSSDL+SKW+GESEKLV +LF++AR+ PSIIFIDE+DSLCG R E NESEA+RRIKTE LVQMQGVG+N+ LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++HLG TPHNLT+++ LARKTEG+SG+DIS+ V+D L +PVRK Q A F K + + PC P GA++++ ++ Sbjct: 164 LLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE-NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCGPSRTNPSVMIDDLLTPCSPGDPGAIEMTWMDV 392
BLAST of CX290764 vs. ExPASy Swiss-Prot
Match: VPS4B_BOVIN (Vacuolar protein sorting-associated protein 4B OS=Bos taurus GN=VPS4B PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 5.872e-75 Identity = 146/230 (63.48%), Postives = 177/230 (76.96%), Query Frame = 1 Query: 19 LLYGPPGTGKSYLAKAVATEAD-STFFSISSSDLVSKWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----------NGMWMPCGPKQSGAVQISMQEL 672 LL+GPPGTGKSYLAKAVATEA+ STFFSISSSDLVSKW+GESEKLV +LFQ+ARE+ PSIIFIDEIDSLCG R E NESEA+RRIKTE LVQMQGVG ++ +LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MFK+HLG T ++LTE+DF L +KTEG+SG+DIS+ V+D L +PVRK Q A F K + + PC P GA++++ ++ Sbjct: 171 LLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFKLHLGTTQNSLTEADFRDLGKKTEGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNNIVDDLLTPCSPGDPGAIEMTWMDV 399
BLAST of CX290764 vs. ExPASy Swiss-Prot
Match: VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 5.872e-75 Identity = 143/230 (62.17%), Postives = 177/230 (76.96%), Query Frame = 1 Query: 19 LLYGPPGTGKSYLAKAVATEAD-STFFSISSSDLVSKWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----------NGMWMPCGPKQSGAVQISMQEL 672 LL+GPPGTGKSYLAKAVATEA+ STFFS+SSSDL+SKW+GESEKLV +LF++AR+ PSIIFIDE+DSLCG R E NESEA+RRIKTE LVQMQGVG+N+ LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++HLG TPHNLT+++ LARKTEG+SG+DIS+ V+D L +PVRK Q A F K + + PC P GA++++ ++ Sbjct: 164 LLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE-NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCGPSRTNPSMMIDDLLTPCSPGDPGAMEMTWMDV 392
BLAST of CX290764 vs. ExPASy Swiss-Prot
Match: VPS4B_HUMAN (Vacuolar protein sorting-associated protein 4B OS=Homo sapiens GN=VPS4B PE=1 SV=2) HSP 1 Score: 279.641 bits (714), Expect = 1.002e-74 Identity = 146/230 (63.48%), Postives = 177/230 (76.96%), Query Frame = 1 Query: 19 LLYGPPGTGKSYLAKAVATEAD-STFFSISSSDLVSKWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----------NGMWMPCGPKQSGAVQISMQEL 672 LL+GPPGTGKSYLAKAVATEA+ STFFSISSSDLVSKW+GESEKLV +LFQ+ARE+ PSIIFIDEIDSLCG R E NESEA+RRIKTE LVQMQGVG ++ +LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MFK+HLG T ++LTE+DF L RKT+G+SG+DIS+ V+D L +PVRK Q A F K + + PC P GA++++ ++ Sbjct: 171 LLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDV 399
BLAST of CX290764 vs. ExPASy Swiss-Prot
Match: VPS4B_PONAB (Vacuolar protein sorting-associated protein 4B OS=Pongo abelii GN=VPS4B PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 2.914e-74 Identity = 145/230 (63.04%), Postives = 177/230 (76.96%), Query Frame = 1 Query: 19 LLYGPPGTGKSYLAKAVATEAD-STFFSISSSDLVSKWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKTS-----------NGMWMPCGPKQSGAVQISMQEL 672 LL+GPPGTGKSYLAKAVATEA+ STFFSISSSDLVSKW+GESEKLV +LFQ+ARE+ PSIIFIDEIDSLCG R E NESEA+RRIKTE LVQM+GVG ++ +LVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MFK+HLG T ++LTE+DF L RKT+G+SG+DIS+ V+D L +PVRK Q A F K + + PC P GA++++ ++ Sbjct: 171 LLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAARRIKTEFLVQMRGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDV 399
BLAST of CX290764 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 3.563e-72 Identity = 142/223 (63.68%), Postives = 167/223 (74.89%), Query Frame = 1 Query: 19 LLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFF-----FKTSNGMWMPCGPKQSGAVQISMQEL 672 LLYGPPGTGKSYLAKAVATEA STFFSISSSDLVSKWMGESE+LV LF+MARE PSIIFIDEIDSLCG R EG ESE+SRRIKTE LVQM GVG ++ VLVL ATN P+ LD AIRRRF+KRIYIPLP+ AR MF++++G P LT DF+ LA+ T+G+SGSDIS+ V+D + EPVR+ A F K++ + PC P A + S E+ Sbjct: 166 LLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEG-ESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRRRFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPVRRIHTATHFKEVYDNKSNRTLVTPCSPGDPDAFESSWLEV 387
BLAST of CX290764 vs. ExPASy Swiss-Prot
Match: VPS4_DICDI (Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum GN=vps4 PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.195e-65 Identity = 122/195 (62.56%), Postives = 152/195 (77.95%), Query Frame = 1 Query: 10 EAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMFF 594 + LLYGPPGTGKSYLAKAVATE STFFSIS SD+V+KW+G+SEKLV LF+MARE S+IFIDE+DSLC R + ESE++RRIKTE L+QM GVG++ +LVLAATN P+ LD AIRRRF+KRIYI LP+ +AR MF++H+G TP+ L ++D++ LA TEG+SGSDI VKD + +PVR Q A F Sbjct: 169 KGILLYGPPGTGKSYLAKAVATEISSTFFSISPSDIVTKWLGDSEKLVKQLFEMAREKNNSVIFIDEVDSLCSSRND-QESESARRIKTEFLIQMNGVGNDSDGILVLAATNIPWGLDLAIRRRFEKRIYIGLPEPQARAKMFQIHIGSTPNTLVQADYKKLADLTEGYSGSDIGSLVKDAIMQPVRAVQCATHF 362 The following BLAST results are available for this feature:
BLAST of CX290764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290764 ID=CX290764; Name=CX290764; organism=Citrus clementina; type=EST; length=673bpback to top |