CX290776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290776 vs. ExPASy Swiss-Prot
Match: AB13I_ARATH (Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Arabidopsis thaliana GN=TGD3 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.076e-47 Identity = 98/131 (74.81%), Postives = 111/131 (84.73%), Query Frame = 1 Query: 286 QRKVVCACVAPPRDLGTDGFPATKFNDSSKSENVNTLFEP-EDDGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQ 675 +RKV C C+APP++L D ATKF+ +KS E+D DVLI+CR+VYKSFGEKHIL+GVSFKIRHGEAVG+IGPSGTGKSTILKI+AGLLAPDKGEVYIRG+KRAGLISDEEISGLRIGLVFQ Sbjct: 40 RRKVSCCCIAPPQNLDND---ATKFDSLTKSGGGMCKERGLENDSDVLIECRDVYKSFGEKHILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGEVYIRGKKRAGLISDEEISGLRIGLVFQ 167 HSP 2 Score: 22.3274 bits (46), Expect = 2.076e-47 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 669 FPSAALFDSLTV 704 F SAALFDSL+V Sbjct: 166 FQSAALFDSLSV 177
BLAST of CX290776 vs. ExPASy Swiss-Prot
Match: Y5533_VIBVU (Putative ABC transporter ATP-binding protein VV2_1533 OS=Vibrio vulnificus GN=VV2_1533 PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12 Identity = 37/87 (42.53%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 418 DVLIDCRNVYKSF-GEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQ 675 + L+D RN+ S+ GEK+ L GVSF ++ GE V I+G +G+GKSTI K+I G++ PD G +Y+ G+ + L E ++G+V Q Sbjct: 296 ETLLDVRNLTYSYDGEKNALEGVSFNVQRGEFVSILGKNGSGKSTITKLIMGVIEPDDGAIYLNGQDLSELTIFER--SQKVGVVMQ 380
BLAST of CX290776 vs. ExPASy Swiss-Prot
Match: LOLD_BDEBA (Lipoprotein-releasing system ATP-binding protein lolD OS=Bdellovibrio bacteriovorus GN=lolD PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12 Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 439 NVYKSF----GEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLR---IGLVFQVRLFLT 693 +++KS+ GE ILRGVS IR GEA I+G SG GKST+L+I+ L P+KGE+Y GR + SD+E+S R +G VFQ L+ Sbjct: 5 DIHKSYSQGVGELEILRGVSLDIREGEAFAILGASGAGKSTLLQIMGTLDRPNKGELYCEGRDLLAM-SDDELSRFRNSEMGFVFQFHHLLS 95
BLAST of CX290776 vs. ExPASy Swiss-Prot
Match: METN_BRUSU (Methionine import ATP-binding protein metN OS=Brucella suis GN=metN PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 391 TLFEPEDDGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDE-EISGLRIGLVFQ 675 T+ +P +++ ++V + FGE + GVS + GE +GIIG SG GKST+++ + GL PD G ++I GR+ L D RIG+VFQ Sbjct: 19 TIEKPPATSAPIVEMKDVRRMFGETAAINGVSLSVARGEILGIIGRSGAGKSTLIRCVNGLEKPDTGSIHIEGREITSLDEDALRPVRRRIGMVFQ 114
BLAST of CX290776 vs. ExPASy Swiss-Prot
Match: METN_BRUME (Methionine import ATP-binding protein metN OS=Brucella melitensis GN=metN PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 391 TLFEPEDDGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDE-EISGLRIGLVFQ 675 T+ +P +++ ++V + FGE + GVS + GE +GIIG SG GKST+++ + GL PD G ++I GR+ L D RIG+VFQ Sbjct: 19 TIEKPPATSAPIVEMKDVRRMFGETAAINGVSLSVARGEILGIIGRSGAGKSTLIRCVNGLEKPDTGSIHIEGREITSLDEDALRPVRRRIGMVFQ 114
BLAST of CX290776 vs. ExPASy Swiss-Prot
Match: METN_BRUAB (Methionine import ATP-binding protein metN OS=Brucella abortus GN=metN PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 391 TLFEPEDDGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDE-EISGLRIGLVFQ 675 T+ +P +++ ++V + FGE + GVS + GE +GIIG SG GKST+++ + GL PD G ++I GR+ L D RIG+VFQ Sbjct: 19 TIEKPPATSAPIVEMKDVRRMFGETAAINGVSLSVARGEILGIIGRSGAGKSTLIRCVNGLEKPDTGSIHIEGREITSLDEDALRPVRRRIGMVFQ 114
BLAST of CX290776 vs. ExPASy Swiss-Prot
Match: METN_BRUA2 (Methionine import ATP-binding protein metN OS=Brucella abortus (strain 2308) GN=metN PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 391 TLFEPEDDGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDE-EISGLRIGLVFQ 675 T+ +P +++ ++V + FGE + GVS + GE +GIIG SG GKST+++ + GL PD G ++I GR+ L D RIG+VFQ Sbjct: 19 TIEKPPATSAPIVEMKDVRRMFGETAAINGVSLSVARGEILGIIGRSGAGKSTLIRCVNGLEKPDTGSIHIEGREITSLDEDALRPVRRRIGMVFQ 114
BLAST of CX290776 vs. ExPASy Swiss-Prot
Match: CYSA_METCA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Methylococcus capsulatus GN=cysA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 36/90 (40.00%), Postives = 51/90 (56.67%), Query Frame = 1 Query: 427 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQVRLFLTH 696 I+ RN+ KSFG L+G+ I GE V ++GPSG GK+T+L+IIAGL A D G++ + G + + R+G VFQ H Sbjct: 3 IEIRNITKSFGSFQALKGIDLTIGSGELVALLGPSGCGKTTLLRIIAGLEAADSGQILLHGED----TTHRHVRERRVGFVFQHYALFRH 88
BLAST of CX290776 vs. ExPASy Swiss-Prot
Match: MALK_MANSM (Maltose/maltodextrin import ATP-binding protein malK OS=Mannheimia succiniciproducens (strain MBEL55E) GN=malK PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = 1 Query: 427 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQVRLFLTH 696 + RNV KS+G+ HI + ++ +I GE V +GPSG GKST+L++IAGL GE+YI G K L++D E S IG+VFQ H Sbjct: 4 VSLRNVGKSYGDVHISKDINLEINEGEFVVFVGPSGCGKSTLLRMIAGLEDITTGELYI-GEK---LMNDVEPSKRGIGMVFQSYALYPH 89
BLAST of CX290776 vs. ExPASy Swiss-Prot
Match: CYSA_MESVI (Probable sulfate/thiosulfate import ATP-binding protein cysA OS=Mesostigma viride GN=cysA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 421 VLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQ 675 +LID N+ K FG L ++ +I+ G + ++GPSG+GKST+L+IIAGL PD+G ++I G+ +G I IG VFQ Sbjct: 3 ILID--NISKKFGNFQALNHINLEIKSGSIIALLGPSGSGKSTLLRIIAGLDTPDEGTIWISGKNASGY----SIQSRNIGFVFQ 81 The following BLAST results are available for this feature:
BLAST of CX290776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290776 ID=CX290776; Name=CX290776; organism=Citrus clementina; type=EST; length=704bpback to top |