CX290808

Overview
NameCX290808
Unique NameCX290808
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 286.96 bits (733), Expect = 6.217e-77
Identity = 130/176 (73.86%), Postives = 158/176 (89.77%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMPK 541
            GTVGLSVAQGAK RGA++I+GVD NP K E+AK FGVT+F+N ND +EP+ QVIKR+T GGAD+SFEC+GDTG+ TTALQSC DGWG+ VTLGVPK KPEV+AHYGLFLSG++LKG+LFGGWKPK+DLPSL+++Y+ KE M+DEFITHNL F++IN+AF LM+EGKCLR V+HMPK
Sbjct:  206 GTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAFVLMREGKCLRCVLHMPK 381          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.485e-49
Identity = 91/172 (52.91%), Postives = 127/172 (73.84%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 529
            GTVGL+VA+GAK+ GASRIIG+D +  K + AK FGVTEF+NP D+ +P+QQVI  +TDGG DYSFEC+G+  ++ +AL+ C  GWG +V +GV     E++      ++GR  KG+ FGG+K ++ +P LV +YLKKE  VDE+ITHNL   +IN+AF+L+ EG+CLR V+
Sbjct:  203 GTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTEFINPKDHEKPIQQVIIDLTDGGVDYSFECLGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHNLTLLEINKAFDLLHEGQCLRCVL 374          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.596e-48
Identity = 91/176 (51.70%), Postives = 125/176 (71.02%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMPK 541
            GTVGL+VA+GAK  GASRIIG+D + +K E AK FGV EF+NP D+++P+Q+VI  +TDGG DYSFECIG+  ++  AL+ C  GWG +V +GV     E++      ++GR  KG+ FGG+K +T +P LV +Y+ KE  VDE+ITHNL   +IN+AF+L+ EG CLR V+   K
Sbjct:  204 GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVLDTSK 379          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.643e-48
Identity = 90/176 (51.14%), Postives = 128/176 (72.73%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMPK 541
            GTVGL+VA+GAK+ GASRIIG+D + +K + AK FGVTEF+NP D+++P+QQVI  +TDGG DYSFECIG+  ++ +AL+ C  GWG +V +GV     E++      ++GR  KG+ FGG+K ++ +P LV +YL KE  VDE++TH++   DIN+AF+L+ EG CLR V+   K
Sbjct:  206 GTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVLATDK 381          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.643e-48
Identity = 90/176 (51.14%), Postives = 128/176 (72.73%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMPK 541
            GTVGL+VA+GAK+ GASRIIG+D + +K + AK FGVTEF+NP D+++P+QQVI  +TDGG DYSFECIG+  ++ +AL+ C  GWG +V +GV     E++      ++GR  KG+ FGG+K ++ +P LV +YL KE  VDE++TH++   DIN+AF+L+ EG CLR V+   K
Sbjct:  206 GTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVLATDK 381          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.064e-48
Identity = 90/174 (51.72%), Postives = 127/174 (72.99%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            GTVGL+VA+GAKA GASR+IG+D + +K + AK FGVTEF+NP ++++P+QQV+  +TDGG DYSFECIG+  ++  AL+    GWG +V +GV     E++      ++GR  KG+ FGG+K +T +P LV++Y+KKE  VDE+ITHN+   DIN AF+L+ EG CLR V+ M
Sbjct:  206 GTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNPKEHDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKKEIKVDEYITHNMNLADINDAFHLLHEGGCLRCVLAM 379          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.304e-47
Identity = 90/174 (51.72%), Postives = 125/174 (71.84%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+ A+GA+  GASRIIGVD NP + E+AK FG TEF+NP D+N+PVQ+V+  +T+GG D S EC G+   +  A +   DGWG+AV +GVP    E   H   FL+ RTLKG+ FG +KP+TDLP++V  Y+KKE  V++FITH++ F +IN+AF+LM +G+ +R +I M
Sbjct:  204 GAVGLAAAEGARIAGASRIIGVDLNPSRFEEAKKFGCTEFVNPKDHNKPVQEVLADMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINKAFDLMAKGEGIRCIIRM 377          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.010e-47
Identity = 89/174 (51.15%), Postives = 125/174 (71.84%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+ A+GA+  GASRIIGVD NP + E+A+ FG TEF+NP D+N+PVQ+V+  +T+GG D S EC G+   +  A +   DGWG+AV +GVP    E   H   FL+ RTLKG+ FG +KP+TDLP++V  Y+KKE  V++FITH++ F +IN+AF+LM +G+ +R +I M
Sbjct:  204 GAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLMAKGEGIRCIIRM 377          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 187.193 bits (474), Expect = 6.705e-47
Identity = 87/172 (50.58%), Postives = 120/172 (69.77%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 529
            G VGL+V  G K  GASRIIGVD N +K  +AK FG TE +NP D ++P+Q+V+  +TDGG DYSFECIG+  ++  AL++C  GWG++V +GV     E+A      ++GRT KG+ FGGWK    +P LV+ Y+ K+  VDEF+THNL F++IN+AF LM  GK +R+V+
Sbjct:  201 GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVV 372          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.144e-46
Identity = 88/172 (51.16%), Postives = 118/172 (68.60%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 529
            G VGL+V  G K  GASRIIG+D N +K  KAK FG TE ++P D  +P+Q+V+  +TDGG DYSFECIG+ G++  AL++C  GWG++V +GV     E+A      ++GRT KG+ FGGWK    +P LV+ Y+ K+  VDEF+TH L FE IN+AF LM  GK +RSV+
Sbjct:  200 GGVGLAVIMGCKVAGASRIIGIDLNKDKFAKAKEFGATECISPADFKKPIQEVLIEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVDEYMSKKMKVDEFVTHTLPFEQINEAFELMHAGKSIRSVL 371          
The following BLAST results are available for this feature:
BLAST of CX290808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
ADHL6_ARATH6.217e-7773.86Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADHX_PEA5.485e-4952.91Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_ARATH1.596e-4851.70Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_ORYSJ4.643e-4851.14Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI4.643e-4851.14Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_MAIZE6.064e-4851.72Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADH1_PENAM2.304e-4751.72Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
ADH1_MAIZE3.010e-4751.15Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]
ADHX_HUMAN6.705e-4750.58Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHX_UROHA1.144e-4651.16Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]

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Properties
Property NameValue
Genbank descriptionC02027D07SK IF1 Citrus clementina cDNA clone C02027D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290808 ID=CX290808; Name=CX290808; organism=Citrus clementina; type=EST; length=671bp
GGATTCGGCCGAGGGAACTGTAGGCCTTTCTGTTGCACAAGGTGCAAAAG
CCAGAGGAGCGTCTAGAATTATTGGCGTTGACACTAACCCTGAGAAATGT
GAAAAAGCCAAAGCTTTTGGAGTTACAGAGTTTCTCAACCCAAATGATAA
TAATGAACCTGTTCAACAGGTTATTAAGAGAATTACTGATGGAGGGGCAG
ATTACTCGTTTGAATGTATTGGTGATACAGGAATGATAACTACTGCTTTA
CAATCTTGCTGTGATGGATGGGGTCTTGCAGTGACTCTTGGTGTACCAAA
ACTGAAGCCCGAAGTAGCAGCACACTATGGACTGTTTCTAAGTGGAAGAA
CACTGAAAGGCTCTCTATTTGGTGGATGGAAACCTAAAACTGACCTTCCT
TCATTAGTAAACAGGTATCTTAAAAAGGAGTTCATGGTCGATGAGTTTAT
CACCCATAATCTCCTGTTCGAGGATATCAATCAAGCTTTTAATCTCATGA
AAGAAGGGAAATGTTTGCGCAGTGTAATTCATATGCCGAAATAGTTATGT
TTGGGTTATCGAAACCAAGAAATAGAGACCAAACAACACTGTGGTCAGAT
GGATGAATGCACAAGTGATAATGCACAGCATTTGTGGAGATCTATGAGAA
GTATGTAGCTCTGTTCTTTTT
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