CX290819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290819 vs. ExPASy Swiss-Prot
Match: CCD94_MOUSE (Coiled-coil domain-containing protein 94 OS=Mus musculus GN=Ccdc94 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.214e-28 Identity = 57/111 (51.35%), Postives = 75/111 (67.57%), Query Frame = -2 Query: 1 PTDFDPSKIPRIR*KRNQQMSVCSMISMSIWCSTCGSFIYKWTKFNFRQEDVIGEKYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATVVLNLGVQRRLRKREPR 333 P DFDPSKIP+++ +++Q V M ++ C TCG +IYK KFN R+E V E YLG+ IFRFY KCTRC AE+T KTDP+N+DY +E GAT N ++ L + E R Sbjct: 12 PPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARKETVQNEAYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGAT--RNFQAEKLLEEEEKR 120 HSP 2 Score: 27.7202 bits (60), Expect = 2.214e-28 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = -3 Query: 330 MGERKVLNKYYP 365 M ERKVLNKYYP Sbjct: 1 MSERKVLNKYYP 12
BLAST of CX290819 vs. ExPASy Swiss-Prot
Match: CCD94_HUMAN (Coiled-coil domain-containing protein 94 OS=Homo sapiens GN=CCDC94 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.880e-28 Identity = 57/111 (51.35%), Postives = 75/111 (67.57%), Query Frame = -2 Query: 1 PTDFDPSKIPRIR*KRNQQMSVCSMISMSIWCSTCGSFIYKWTKFNFRQEDVIGEKYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATVVLNLGVQRRLRKREPR 333 P DFDPSKIP+++ +++Q V M ++ C TCG +IYK KFN R+E V E YLG+ IFRFY KCTRC AE+T KTDP+N+DY +E GAT N ++ L + E R Sbjct: 12 PPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARKETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGAT--RNFQAEKLLEEEEKR 120 HSP 2 Score: 27.7202 bits (60), Expect = 2.880e-28 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = -3 Query: 330 MGERKVLNKYYP 365 M ERKVLNKYYP Sbjct: 1 MSERKVLNKYYP 12
BLAST of CX290819 vs. ExPASy Swiss-Prot
Match: CCD94_DICDI (Coiled-coil domain-containing protein 94 homolog OS=Dictyostelium discoideum GN=ccdc94 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.685e-26 Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = -2 Query: 52 G*KKSVE*VLPTDFDPSKIPRIR*KRNQQMSVCSMISMSIWCSTCGSFIYKWTKFNFRQEDVIGEKYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGAT 363 G +K + P DFDPSK+ +I+ KR V +M+ MSI C+TCG +I + TKFN ++E V E YLGI+I+RF+ +C +C+AELTIKTDP+NS+YV ESGAT Sbjct: 2 GERKVISKYYPPDFDPSKVAKIKVKRPTFTKVTTMLPMSIRCNTCGEYIGRGTKFNAKKETVQNEDYLGIKIYRFFLRCKKCAAELTIKTDPKNSEYVCESGAT 105
BLAST of CX290819 vs. ExPASy Swiss-Prot
Match: CWF16_SCHPO (Cell cycle control protein cwf16 OS=Schizosaccharomyces pombe GN=cwf16 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.338e-20 Identity = 52/122 (42.62%), Postives = 75/122 (61.48%), Query Frame = -2 Query: 7 KKSVE*VLPTDFDPSKIPRIR*KRNQ-----QMSVCSMISMSIWCSTCGSFIYKWTKFNFRQEDVIGEKYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATVVLNLGVQRRLRKRE 357 +K + +P D+DPS P + K+ Q +++V M S+ C TCG +IYK KFN R+E GEKY I I RFY +CTRC+AE+T TDP+++DY ESGA+ ++RL++ E Sbjct: 4 RKVLNKYIPPDYDPSIRPPKKKKKFQGPNGGKLTVRLMTPFSMRCHTCGEYIYKGKKFNARKEKT-GEKYFSIDILRFYIRCTRCAAEITFITDPKHADYAAESGASRNYEPWHEKRLQEYE 124 HSP 2 Score: 24.6386 bits (52), Expect = 1.338e-20 Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -3 Query: 330 MGERKVLNKYYP 365 M ERKVLNKY P Sbjct: 1 MSERKVLNKYIP 12
BLAST of CX290819 vs. ExPASy Swiss-Prot
Match: CWC16_YEAST (Protein CWC16 OS=Saccharomyces cerevisiae GN=YJU2 PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 4.864e-11 Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = -2 Query: 58 KKSVE*VLPTDFDPSKIPRIR*KRNQQM--------SVCSMISMSIWCSTCGSFIYKWTKFNFRQEDVIGEKYL-GIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESG 357 +K++ P D++P + ++ K +++ S+ M S+ C C +I K KFN ++E ++ EKYL I+I+R C RC+ + +TDP NSDYV+E G Sbjct: 4 RKAINKYYPPDYNPLEAEKLSRKMAKKLKTMNKSHASIRLMTPFSMRCLECNEYIPKSRKFNGKKE-LLKEKYLDSIKIYRLTISCPRCANSIAFRTDPGNSDYVMEVG 111 HSP 2 Score: 25.409 bits (54), Expect = 4.864e-11 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = -3 Query: 330 MGERKVLNKYYP 365 M ERK +NKYYP Sbjct: 1 MSERKAINKYYP 12 The following BLAST results are available for this feature:
BLAST of CX290819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290819 ID=CX290819; Name=CX290819; organism=Citrus clementina; type=EST; length=760bpback to top |