CX290823
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290823 vs. ExPASy Swiss-Prot
Match: P4HA1_RAT (Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.669e-16 Identity = 55/188 (29.26%), Postives = 93/188 (49.47%), Query Frame = 1 Query: 118 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSL 669 I+ P+K + KPR + ++D E + + +LAK +L R+ V D +G+ + R S ++ +D +++ I +I T L E++QV Y G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP G +V P++G A+ +++L Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFPEV---------------------GASVWPKKGTAVFWYNL 488
BLAST of CX290823 vs. ExPASy Swiss-Prot
Match: P4HA1_MOUSE (Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.847e-16 Identity = 53/188 (28.19%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 118 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSL 669 I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G + R S ++ +D +++ I +I T L E++QV Y G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP G +V P++G A+ +++L Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFPEV---------------------GASVWPKKGTAVFWYNL 488
BLAST of CX290823 vs. ExPASy Swiss-Prot
Match: P4HA1_PONAB (Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.719e-16 Identity = 52/188 (27.66%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 118 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSL 669 I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G+ + R S ++ ++ +++ I +I T L E++QV Y G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP G +V P++G A+ +++L Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEV---------------------GASVWPKKGTAVFWYNL 488
BLAST of CX290823 vs. ExPASy Swiss-Prot
Match: P4HA1_HUMAN (Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.719e-16 Identity = 52/188 (27.66%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 118 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSL 669 I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G+ + R S ++ ++ +++ I +I T L E++QV Y G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP G +V P++G A+ +++L Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEV---------------------GASVWPKKGTAVFWYNL 488
BLAST of CX290823 vs. ExPASy Swiss-Prot
Match: P4HA1_BOVIN (Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.343e-16 Identity = 52/188 (27.66%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 118 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSL 669 I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G+ + R S ++ ++ +++ I +I T L E++QV Y G +YEPH+D+ D + G+R+AT L Y+SDV GG TVFP G +V P++G A+ +++L Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVLAGGATVFPEV---------------------GASVWPKKGTAVFWYNL 488
BLAST of CX290823 vs. ExPASy Swiss-Prot
Match: P4HA2_CAEEL (Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans GN=phy-2 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.082e-15 Identity = 53/187 (28.34%), Postives = 92/187 (49.20%), Query Frame = 1 Query: 127 PSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLTR 675 P KV+ + + P A +++ + D E + + LA +LKR+ V ++ +GE + + R S ++ D +I + +I +T L + E++QV Y G Y+PH+D+ + + G+R+ATVL Y+S +GG TVF + G AV P + DAL +++L R Sbjct: 315 PIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVFNHL---------------------GTAVFPSKNDALFWYNLRR 480
BLAST of CX290823 vs. ExPASy Swiss-Prot
Match: P4HA2_CHICK (Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.846e-15 Identity = 54/189 (28.57%), Postives = 92/189 (48.68%), Query Frame = 1 Query: 118 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVN--IVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLTRT 678 +I P K + P Y ++D E + + LAK +L R+ V D +G ++ R S +++ + D ++A + ++ T L + E +QV Y G +YEPH+D+ + + G+RLAT L Y+SDV GG TVFP+ G A+ P++G A+ +++L R+ Sbjct: 324 LIAPFKEEDEWDSPHIVRYYDVMSDEEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTLKSEGNRLATFLNYMSDVEAGGATVFPDF---------------------GAAIWPKKGTAVFWYNLFRS 491
BLAST of CX290823 vs. ExPASy Swiss-Prot
Match: P4HA2_MOUSE (Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 53/191 (27.75%), Postives = 92/191 (48.17%), Query Frame = 1 Query: 118 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLTRT 678 +I P K + P Y ++D E + + +AK +L R+ V D +G ++ R S +++ + D ++A + ++ T L + E +QV Y G +YEPH+D+ D + G+R+AT L Y+SDV GG TVFP+ G A+ P++G A+ +++L R+ Sbjct: 325 LIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFLNYMSDVEAGGATVFPDL---------------------GAAIWPKKGTAVFWYNLLRS 494
BLAST of CX290823 vs. ExPASy Swiss-Prot
Match: P4HA2_HUMAN (Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.370e-15 Identity = 53/191 (27.75%), Postives = 92/191 (48.17%), Query Frame = 1 Query: 118 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLTRT 678 +I P K + P Y ++D E + + +AK +L R+ V D +G ++ R S +++ + D ++A + ++ T L + E +QV Y G +YEPH+D+ D + G+R+AT L Y+SDV GG TVFP+ G A+ P++G A+ +++L R+ Sbjct: 323 LIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFLNYMSDVEAGGATVFPDL---------------------GAAIWPKKGTAVFWYNLLRS 492
BLAST of CX290823 vs. ExPASy Swiss-Prot
Match: P4HA1_CHICK (Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.370e-15 Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 1 Query: 118 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDY----FSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSL 669 I+ P K + KPR + ++D E + + LAK +L R+ V D +G+ + R S ++ + +++ I +I T L E++QV Y G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP G +V P++G A+ +++L Sbjct: 304 ILGPVKQEDEWDKPRIVRFLDIISDEEIETVKELAKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYESPVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEV---------------------GASVWPKKGTAVFWYNL 470 The following BLAST results are available for this feature:
BLAST of CX290823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290823 ID=CX290823; Name=CX290823; organism=Citrus clementina; type=EST; length=682bpback to top |