CX290836

Overview
NameCX290836
Unique NameCX290836
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length603
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15266 contig Ccv1_Contig15266:90..692. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 5.750e-105
Identity = 183/197 (92.89%), Postives = 193/197 (97.97%), Query Frame = 3
Query:    6 GERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANIP 596
            GERSRLAQSF+YNYGDFIPILRPFLRGYLKIC+EVKERRLQLFKDYFV+ERKKLASTK+MSNE LKCAIDHILDAQ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLR+ELDT+LGPGHQITEPDT+KLPYL AV+KETLRLRMAIPLLVPHMNLHDAKLGG+D+PAESKILVNAWWLAN P
Sbjct:  211 GERSRLAQSFDYNYGDFIPILRPFLRGYLKICQEVKERRLQLFKDYFVDERKKLASTKNMSNEGLKCAIDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNP 407          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 2.185e-104
Identity = 182/197 (92.39%), Postives = 192/197 (97.46%), Query Frame = 3
Query:    6 GERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANIP 596
            GERSRLAQSF+YNYGDFIPILRPFLRGYLKIC+EVKERRLQLFKDYFV+ERKKLASTK+M NE LKCAIDHILDAQ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLR+ELDT+LGPGHQITEPDT+KLPYL AV+KETLRLRMAIPLLVPHMNLHDAKLGG+D+PAESKILVNAWWLAN P
Sbjct:  211 GERSRLAQSFDYNYGDFIPILRPFLRGYLKICQEVKERRLQLFKDYFVDERKKLASTKNMCNEGLKCAIDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNP 407          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 4.121e-103
Identity = 181/199 (90.95%), Postives = 189/199 (94.97%), Query Frame = 3
Query:    6 GERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANIPPN 602
            GERSRLAQSFEYNYGDFIPILRPFL+GYLKICKEVKERRL+LFKDYFV+ER KL STKS SNE LKCAIDHILDAQ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKK+R+E+D VLGPGHQ+TEPD  KLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYD+PAESKILVNAWWLAN P N
Sbjct:  211 GERSRLAQSFEYNYGDFIPILRPFLKGYLKICKEVKERRLKLFKDYFVDERMKLESTKSTSNEGLKCAIDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKVRDEIDRVLGPGHQVTEPDMQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAN 409          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 3.857e-101
Identity = 179/197 (90.86%), Postives = 188/197 (95.43%), Query Frame = 3
Query:    6 GERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANIP 596
            GERSRLAQ FEYNYGDFIPILRPFLRGYL+ICKEVKERRLQLFKDYFV+ERKK  STKSM N SLKCAIDHIL+AQ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLR+EL+TVLGPG QITEPDT+KLPYLQAVIKETLRLRMAIPL +PHMNLHDAKLGGYD+PAESKILVNAW+LAN P
Sbjct:  211 GERSRLAQGFEYNYGDFIPILRPFLRGYLRICKEVKERRLQLFKDYFVDERKKFGSTKSMDNNSLKCAIDHILEAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELETVLGPGVQITEPDTYKLPYLQAVIKETLRLRMAIPLFLPHMNLHDAKLGGYDIPAESKILVNAWFLANNP 407          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 6.579e-101
Identity = 178/197 (90.36%), Postives = 187/197 (94.92%), Query Frame = 3
Query:    6 GERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANIP 596
            GERSRLAQSFEYNYGDFIPILRPFLRGYLK+ KEVKERRL+LFKDYFVEERKKL STKSM+ E+ KCAIDH+LDAQ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHP+IQKKLR E+D VLGP HQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNL+DAKL GYD+PAESKILVNAWWLAN P
Sbjct:  211 GERSRLAQSFEYNYGDFIPILRPFLRGYLKLVKEVKERRLKLFKDYFVEERKKLTSTKSMTEENFKCAIDHVLDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPDIQKKLRAEIDRVLGPDHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLNDAKLAGYDIPAESKILVNAWWLANNP 407          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 365.155 bits (936), Expect = 1.466e-100
Identity = 176/197 (89.34%), Postives = 185/197 (93.91%), Query Frame = 3
Query:    6 GERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANIP 596
            GERSRLAQSFEYNYGDFIPILRPFL+GYLK+CKEVK+RRLQLFKDYFV+ERKKL STKS  NE LKCAIDHILDAQ KGEIN+DNVLYIVENINVAAIETTLWSIEWGIAELVNH EIQ KLR E+D VLGPGHQ+TEPD  KLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGG+D+PAESKILVNAWWLAN P
Sbjct:  211 GERSRLAQSFEYNYGDFIPILRPFLKGYLKVCKEVKDRRLQLFKDYFVDERKKLGSTKSTYNEGLKCAIDHILDAQKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQEIQNKLREEMDKVLGPGHQVTEPDLEKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNP 407          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 1.620e-99
Identity = 173/197 (87.82%), Postives = 186/197 (94.42%), Query Frame = 3
Query:    6 GERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANIP 596
            GERSRLAQSFEYNYGDFIPILRPFL+GYLKICKEVKE RL+LFKDYFV+ERK + STKS +NE LKCAIDHILDA+ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQ+K+R+E+D VLG GHQ+TEPD  KLPYLQAV+KETLRLRMAIPLLVPHMNLHDAKLGGYD+PAESKILVNAWWLAN P
Sbjct:  211 GERSRLAQSFEYNYGDFIPILRPFLKGYLKICKEVKETRLKLFKDYFVDERKNIGSTKSTNNEGLKCAIDHILDAEKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQQKVRDEIDRVLGVGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNP 407          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 2.764e-99
Identity = 175/197 (88.83%), Postives = 184/197 (93.40%), Query Frame = 3
Query:    6 GERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANIP 596
            GERSRLAQSFEYNYGDFIPILRPFL+GYLK+CKEVKE+R QLFKDYFV+ERKKL STKSM N  LKCAIDHILDA+ KGEINEDNVLYIVENINVAAIETTLWSIEW IAELVNHPEIQ KLR+EL + LGPG Q+TEPD HKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYD+PAESKILVNAWWLAN P
Sbjct:  211 GERSRLAQSFEYNYGDFIPILRPFLKGYLKLCKEVKEKRFQLFKDYFVDERKKLGSTKSMDNNQLKCAIDHILDAKDKGEINEDNVLYIVENINVAAIETTLWSIEWAIAELVNHPEIQAKLRHELVSQLGPGVQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNP 407          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 2.764e-99
Identity = 176/198 (88.89%), Postives = 187/198 (94.44%), Query Frame = 3
Query:    6 GERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNES-LKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANIP 596
            GERSRLAQSFEYNYGDFIPILRPFL+GYLKICKEVKE RL+LFKDYFV+ERKKL STKS +N + LKCAIDHILDAQ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQ+KLR+E+D VLG GHQ+TEPD  KLPYLQAV+KETLRLRMAIPLLVPHMNLHDAKLGGYD+PAESKILVNAWWLAN P
Sbjct:  211 GERSRLAQSFEYNYGDFIPILRPFLKGYLKICKEVKETRLKLFKDYFVDERKKLGSTKSTNNNNELKCAIDHILDAQRKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQQKLRDEIDRVLGAGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNP 408          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 360.918 bits (925), Expect = 2.764e-99
Identity = 173/197 (87.82%), Postives = 185/197 (93.91%), Query Frame = 3
Query:    6 GERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANIP 596
            GERSRLAQSFEYNYGDFIPILRPFL+GYLK+CKEVK+RRLQLFKDYFV+ERKKL STKS +NE LKCAIDHILDAQ KGEIN+DNVLYIVENINVAAIETTLWSIEWGIAELVNH +IQ K+R E+D VLGPGHQ+TEPD  KLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKL G+D+PAESKILVNAWWLAN P
Sbjct:  210 GERSRLAQSFEYNYGDFIPILRPFLKGYLKLCKEVKDRRLQLFKDYFVDERKKLGSTKSTTNEGLKCAIDHILDAQQKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQKIQNKVREEIDRVLGPGHQVTEPDLQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLSGFDIPAESKILVNAWWLANNP 406          
The following BLAST results are available for this feature:
BLAST of CX290836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 276
Match NameE-valueIdentityDescription
TCMO_POPKI5.750e-10592.89Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_POPTM2.185e-10492.39Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_GLYEC4.121e-10390.95Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_CATRO3.857e-10190.86Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_RUTGR6.579e-10190.36Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_PEA1.466e-10089.34Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_PHAAU1.620e-9987.82Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_ZINEL2.764e-9988.83Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_SOYBN2.764e-9988.89Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_CICAR2.764e-9987.82Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]

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Properties
Property NameValue
Genbank descriptionC02027F12SK IF1 Citrus clementina cDNA clone C02027F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290836 ID=CX290836; Name=CX290836; organism=Citrus clementina; type=EST; length=603bp
CGAGGGGTGAGAGGAGTCGGTTGGCCCAGAGCTTTGAGTACAATTACGGT
GATTTTATTCCCATTTTGAGACCTTTCTTGAGAGGCTACTTGAAGATTTG
TAAGGAAGTTAAAGAAAGGAGACTCCAGCTCTTCAAGGACTACTTTGTTG
AGGAGAGAAAGAAATTGGCAAGCACGAAGAGCATGAGTAATGAAAGCTTG
AAATGCGCAATCGATCATATTTTGGACGCTCAGACAAAGGGAGAAATCAA
CGAGGACAACGTTCTATACATCGTTGAGAACATCAATGTTGCCGCGATCG
AGACAACTCTTTGGTCGATCGAGTGGGGAATTGCAGAGCTAGTGAATCAT
CCTGAAATCCAGAAGAAGCTCCGCAATGAACTTGACACCGTGCTTGGTCC
TGGTCATCAAATCACTGAGCCTGACACCCACAAACTACCCTACCTTCAGG
CCGTGATCAAGGAAACTCTTCGCCTTAGGATGGCAATTCCTCTTCTTGTG
CCGCACATGAACCTTCACGACGCCAAGCTTGGAGGCTACGACGTCCCTGC
TGAGAGCAAAATCCTAGTGAACGCGTGGTGGCTCGCCAACATCCCGCCCA
ATG
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