CX290845

Overview
NameCX290845
Unique NameCX290845
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length560
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX290845 vs. ExPASy Swiss-Prot
Match: QCR6_SOLTU (Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 2.120e-23
Identity = 46/69 (66.67%), Postives = 55/69 (79.71%), Query Frame = 3 
Query:  111 MADEEIADPKKYLEEACKPKCVKSLIEYEACVKRIEADDTGSKHCTGQYFDYLSCVDKCVAPKLFIQLK 317
            M+DEE+ DPK  LE +CKPKCV+ L EY+AC KR+E D++G KHCTGQYFDY  C+DKCVA KLF  LK
Sbjct:    1 MSDEEVVDPKATLEVSCKPKCVRQLKEYQACTKRVEGDESGHKHCTGQYFDYWHCIDKCVAAKLFDHLK 69
The following BLAST results are available for this feature:
BLAST of CX290845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
QCR6_SOLTU2.120e-2366.67Cytochrome b-c1 complex subunit 6 OS=Solanum tuber... [more]
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Properties
Property NameValue
Genbank descriptionC02027G09SK IF1 Citrus clementina cDNA clone C02027G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290845 ID=CX290845; Name=CX290845; organism=Citrus clementina; type=EST; length=560bp
CGAGGCTTTCGCATCGCACGAGCCGCCGATTTCTGTTTCTCTTGAAAAAC
AAGGAAACAAGCACTTGTGCTTTGAATTCAATTCAGCTTTTTCATATTGC
ATTTAATCCAATGGCGGATGAGGAAATTGCTGATCCGAAGAAGTATCTTG
AGGAAGCTTGCAAGCCTAAATGTGTGAAGTCTTTAATTGAATATGAGGCT
TGCGTTAAAAGGATTGAAGCTGATGATACTGGCAGCAAGCATTGCACTGG
GCAGTATTTTGACTACTTATCGTGTGTTGATAAATGTGTTGCCCCGAAGC
TATTCATCCAGCTGAAGTGATTATGAAGTTAATAGGATATCTGCTGCCTT
ATTCTCGTTTCCTCTTTGCGAATGTCAGCCAACCATAGCCAAATGGTTTA
TTGGTTCATCCATCCCCTAGCTACCGTTTATTTTGGTTTTGCTAATGGCT
TTCCCCTTCCAGCCTTTTGGATTGAGAACTGATCTATAATAAAGAAAAGG
CGTCCTTCATTATGATGTGAATAATATCAGGAATTGGAATAAAAAAAAAA
AAAAAAAAAA
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