CX290892

Overview
NameCX290892
Unique NameCX290892
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length468
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5613 contig Ccv1_Contig5613:56..523. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290892 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 3.899e-63
Identity = 113/137 (82.48%), Postives = 122/137 (89.05%), Query Frame = 2
Query:   56 MGVPQTDPLSQLNLPSDYRIYPTDEELLVQ*L*RKVAGQHFSLQIIGERDLYKFDPWVLPSKAVFGEKEWYFFSPRDRKYTNGSRPNRVAGSGYWKATGTDKIITTEGRKVVIKKALVFYVGKAPKGTTTNWIMHEY 466
            MGV + DPL+QL+LP  +R YPTDEELLVQ L RKVAG HFSLQ+IG+ DLYKFDPW LPSKA+FGEKEWYFFSPRDRKY NGSRPNRVAGSGYWKATGTDKIIT +GR+V IKKALVFY GKAPKGT TNWIMHEY
Sbjct:    1 MGVREKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEY 137          
BLAST of CX290892 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 1.935e-62
Identity = 110/137 (80.29%), Postives = 123/137 (89.78%), Query Frame = 2
Query:   56 MGVPQTDPLSQLNLPSDYRIYPTDEELLVQ*L*RKVAGQHFSLQIIGERDLYKFDPWVLPSKAVFGEKEWYFFSPRDRKYTNGSRPNRVAGSGYWKATGTDKIITTEGRKVVIKKALVFYVGKAPKGTTTNWIMHEY 466
            MG+ +TDPL+QL+LP  +R YPTDEEL+VQ L RK AG  FSLQ+I E DLYKFDPWVLP+KA+FGEKEWYFFSPRDRKY NGSRPNRVAGSGYWKATGTDKII+TEG++V IKKALVFY+GKAPKGT TNWIMHEY
Sbjct:    1 MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEY 137          
BLAST of CX290892 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 5.630e-62
Identity = 109/137 (79.56%), Postives = 122/137 (89.05%), Query Frame = 2
Query:   56 MGVPQTDPLSQLNLPSDYRIYPTDEELLVQ*L*RKVAGQHFSLQIIGERDLYKFDPWVLPSKAVFGEKEWYFFSPRDRKYTNGSRPNRVAGSGYWKATGTDKIITTEGRKVVIKKALVFYVGKAPKGTTTNWIMHEY 466
            MG+ + DPL+QL+LP  +R YPTDEEL+V+ L RK AG  FSLQ+I E DLYKFDPWVLPSKA+FGEKEWYFFSPRDRKY NGSRPNRVAGSGYWKATGTDK+I+TEGR+V IKKALVFY+GKAPKGT TNWIMHEY
Sbjct:    1 MGLQELDPLAQLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEY 137          
BLAST of CX290892 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 9.648e-46
Identity = 89/138 (64.49%), Postives = 102/138 (73.91%), Query Frame = 2
Query:   59 GVPQTDPLSQLNLPSDYRIYPTDEELLVQ*L*RKVAGQHFSLQIIGERDLYKFDPWVLPSKAVFGEKEWYFFSPRDRKYTNGSRPNRVAGSGYWKATGTDKIITTEG--RKVVIKKALVFYVGKAPKGTTTNWIMHEY 466
            G  + D  ++LNLP  +R +PTDEEL+V  L RKVA Q   + II E DLYK DPW LP KA+FG KEWYFF+PRDRKY NGSRPNR AG GYWKATG DK +  +G  R V IKKALVFY GKAP+G  T+WIMHEY
Sbjct:    9 GSGRRDAEAELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEY 146          
BLAST of CX290892 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.067e-44
Identity = 85/126 (67.46%), Postives = 97/126 (76.98%), Query Frame = 2
Query:   89 LNLPSDYRIYPTDEELLVQ*L*RKVAGQHFSLQIIGERDLYKFDPWVLPSKAVFGEKEWYFFSPRDRKYTNGSRPNRVAGSGYWKATGTDKIITTEGRKVVIKKALVFYVGKAPKGTTTNWIMHEY 466
            L LP  +R +PTDEEL++  L R+ AG   ++ II E DLYKFDPW LP  A++GEKEWYFFSPRDRKY NGSRPNR AGSGYWKATG DK + +  + V IKKALVFY GKAPKG  TNWIMHEY
Sbjct:    7 LQLPPGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSP-KPVAIKKALVFYAGKAPKGEKTNWIMHEY 131          
BLAST of CX290892 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 3.104e-44
Identity = 86/126 (68.25%), Postives = 96/126 (76.19%), Query Frame = 2
Query:   89 LNLPSDYRIYPTDEELLVQ*L*RKVAGQHFSLQIIGERDLYKFDPWVLPSKAVFGEKEWYFFSPRDRKYTNGSRPNRVAGSGYWKATGTDKIITTEGRKVVIKKALVFYVGKAPKGTTTNWIMHEY 466
            L LP  +R +PTDEEL++  L RK A Q  ++ II E DLYK+DPW LP  A++GEKEWYFFSPRDRKY NGSRPNR AGSGYWKATG DK I    + V IKKALVFY GKAPKG  TNWIMHEY
Sbjct:    5 LQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLP-KPVGIKKALVFYAGKAPKGEKTNWIMHEY 129          
BLAST of CX290892 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 4.482e-43
Identity = 85/134 (63.43%), Postives = 100/134 (74.63%), Query Frame = 2
Query:   77 PLSQLNLPSDYRIYPTDEELLVQ*L*RKVAGQHFSLQIIGERDLYKFDPWVLPSKAVFGEKEWYFFSPRDRKYTNGSRPNRVAGSGYWKATGTDK-IITTEG---RKVVIKKALVFYVGKAPKGTTTNWIMHEY 466
            P  Q NLP  +R +PTDEEL++  L RK       + II + DLYKFDPW LP+KA FGE+EWYFFSPRDRKY NG+RPNR A SGYWKATGTDK +I+T G   +KV +KKALVFY GK PKG  ++WIMHEY
Sbjct:   11 PPPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEY 144          
BLAST of CX290892 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.224e-42
Identity = 81/128 (63.28%), Postives = 99/128 (77.34%), Query Frame = 2
Query:   83 SQLNLPSDYRIYPTDEELLVQ*L*RKVAGQHFSLQIIGERDLYKFDPWVLPSKAVFGEKEWYFFSPRDRKYTNGSRPNRVAGSGYWKATGTDKIITTEGRKVVIKKALVFYVGKAPKGTTTNWIMHEY 466
            ++LNLP+ +R +PTDEEL+   L R+ A +  ++ +I E DLYKF+PW LP  A++GEKEWYFFS RDRKY NGSRPNR AG+GYWKATG DK I  + + + IKKALVFY GKAPKG  TNWIMHEY
Sbjct:   46 AELNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEY 172          
BLAST of CX290892 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 4.955e-42
Identity = 79/131 (60.31%), Postives = 93/131 (70.99%), Query Frame = 2
Query:   74 DPLSQLNLPSDYRIYPTDEELLVQ*L*RKVAGQHFSLQIIGERDLYKFDPWVLPSKAVFGEKEWYFFSPRDRKYTNGSRPNRVAGSGYWKATGTDKIITTEGRKVVIKKALVFYVGKAPKGTTTNWIMHEY 466
            D  + LNLP  +R +PTDEEL+   L  + AG+   + II E DLY+ DPW LP +A+FG +EWYFF+PRDRKY NGSRPNR A SGYWKATG DK +   GR   IKKALVFY GK P+G  T WIMHEY
Sbjct:   10 DAEADLNLPPGFRFHPTDEELVAHYLCPRAAGRAAPVPIIAELDLYRHDPWDLPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMHEY 140          
BLAST of CX290892 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 6.471e-42
Identity = 80/126 (63.49%), Postives = 93/126 (73.81%), Query Frame = 2
Query:   89 LNLPSDYRIYPTDEELLVQ*L*RKVAGQHFSLQIIGERDLYKFDPWVLPSKAVFGEKEWYFFSPRDRKYTNGSRPNRVAGSGYWKATGTDKIITTEGRKVVIKKALVFYVGKAPKGTTTNWIMHEY 466
            L LP  +R +PTD+EL++  L RK  G   +  +I E DLYKF+PW LP +A+ GEKEWYFFSPRDRKY NG RPNR AG+GYWKATG DK + +  R V IKKALVFY GK PKG  TNWIMHEY
Sbjct:    7 LQLPPGFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGSP-RAVAIKKALVFYAGKPPKGVKTNWIMHEY 131          
The following BLAST results are available for this feature:
BLAST of CX290892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
NAC72_ARATH3.899e-6382.48NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC19_ARATH1.935e-6280.29NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC55_ARATH5.630e-6279.56NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC68_ORYSJ9.648e-4664.49NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC48_ORYSJ1.067e-4467.46NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC2_ARATH3.104e-4468.25NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC18_ARATH4.482e-4363.43NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NA102_ARATH2.224e-4263.28NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC67_ORYSJ4.955e-4260.31NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NAC71_ORYSJ6.471e-4263.49NAC domain-containing protein 71 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionC03001D06Rv OF1 Citrus clementina cDNA clone C03001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290892 ID=CX290892; Name=CX290892; organism=Citrus clementina; type=EST; length=468bp
AGCTCAGCATCTTCATCTATATCTTTTATTCGCAATTCATTTGAAAGCTT
GAAAAATGGGCGTACCGCAGACCGACCCGCTCTCACAATTGAACTTACCT
TCGGATTATCGGATTTACCCGACTGATGAGGAACTTCTAGTTCAATAACT
CTGACGCAAAGTTGCAGGGCAACATTTTTCGCTGCAAATTATCGGGGAAA
GAGATTTGTACAAGTTTGACCCATGGGTTCTACCAAGCAAGGCAGTTTTT
GGTGAGAAAGAATGGTACTTTTTCAGCCCCAGGGATAGAAAATATACAAA
CGGGTCCCGACCCAACAGAGTAGCCGGCTCCGGATATTGGAAGGCCACAG
GCACCGACAAGATTATCACAACTGAAGGTCGTAAGGTTGTTATCAAAAAG
GCTCTTGTTTTTTACGTAGGCAAAGCTCCAAAAGGCACCACAACCAATTG
GATCATGCACGAATATCG
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