CX290894
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290894 vs. ExPASy Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.154e-24 Identity = 84/177 (47.46%), Postives = 94/177 (53.11%), Query Frame = 1 Query: 40 MGFDDGCNTGLVLGLGFASAIETTPTNKANNINIVNHQQLQLPKGTCFEPSLSLGLPGEIYPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXXRASD--EDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQ 564 MGFDD CNTGLVLGLG P+ NN N Q EPSL+L L G+ S+ V G ++ L RQ S HS VS SFSSGRVVKRERD SD EDE+G++ARKKLRLTK+QSALLEESFK HSTLNPKQ Sbjct: 1 MGFDDTCNTGLVLGLG--------PSPIPNNYNSTIRQSSVYK----LEPSLTLCLSGD--------------PSVTVVTGADQ-----------LCRQTSSHSGVS-SFSSGRVVKRERDGGEESPEEEEMTERVISDYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQ 139
BLAST of CX290894 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.406e-22 Identity = 80/187 (42.78%), Postives = 101/187 (54.01%), Query Frame = 1 Query: 40 MGFDDGCNTGLVLGLGFASAIETTPTNKANNI----NIVNHQQLQLPKGTCFEPSLSLGLPGEIYPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXX------RASDE--DEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQ 564 MG DD CNTGLVLGLG + TP N + I + V+H+ ++L +PSL+L L GE Y+ AG + + RQ S HS +S SFSSGRV KRER++ R SD+ DE+GV+ARKKLRLTK+QSALLE++FK HSTLNPKQ Sbjct: 1 MGLDDSCNTGLVLGLG----LSPTPNNYNHAIKKSSSTVDHRFIRL------DPSLTLSLSGE---------------------SYKIKTGAGAGDQ--ICRQTSSHSGIS-SFSSGRV-KREREISGGDGEEEAEETTERVVCSRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQ 152
BLAST of CX290894 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 56/166 (33.73%), Postives = 86/166 (51.81%), Query Frame = 1 Query: 67 GLVLGLGFASAIETTPTNKANNINIVNHQQLQLPKGTCFEPSLSLGLPGEIYPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXXRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQ 564 GL LGL F +N + ++ + L + + + S + +P +++ T+ IDVN+ +A G + + +SP+S VS+S +G+ +RE D R +DEDG N+RKKLRL+K+QSA+LEE+FK HSTLNPKQ Sbjct: 9 GLSLGLNFPKKQINLKSNPSVSVT-PSSSSFGLFRRSSWNESFTSSVPNS---DSSQKETRTFIRGIDVNRP-PSTAEYGDEDAGV----SSPNSTVSSS--TGKRSEREEDTDPQGS--------RGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQ 155 The following BLAST results are available for this feature:
BLAST of CX290894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290894 ID=CX290894; Name=CX290894; organism=Citrus clementina; type=EST; length=565bpback to top |