CX290966

Overview
NameCX290966
Unique NameCX290966
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length613
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 2.113e-100
Identity = 140/151 (92.72%), Postives = 145/151 (96.03%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTK K+DYEKIVRDTCR+IGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E+MPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKGKIDYEKIVRDTCRNIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 207

HSP 2 Score: 91.6633 bits (226), Expect = 2.113e-100
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 2.757e-100
Identity = 141/151 (93.38%), Postives = 146/151 (96.69%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E+MPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKANVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIA 207

HSP 2 Score: 91.6633 bits (226), Expect = 2.757e-100
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 6.120e-100
Identity = 142/151 (94.04%), Postives = 144/151 (95.36%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCRSIGFVSDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET EFMPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEYYN+NGA VPVRVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKADVDYEKIVRDTCRSIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIA 207

HSP 2 Score: 91.6633 bits (226), Expect = 6.120e-100
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK_WHEAT (S-adenosylmethionine synthetase OS=Triticum aestivum GN=SAMS PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 1.360e-99
Identity = 141/151 (93.38%), Postives = 146/151 (96.69%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR IGFVS+DVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET EFMPLSHVLATKLGA LTEVRKN+TC WLRPDGKTQVTVEY+NDNGAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   60 ITTKANVDYEKIVRDTCRGIGFVSNDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNATCPWLRPDGKTQVTVEYHNDNGAMVPIRVHTVLISTQHDETVTNDEIA 210

HSP 2 Score: 88.1965 bits (217), Expect = 1.360e-99
Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPE+YLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  208 EIAADLKEHVIKPVIPEQYLDENTIFHLNPSGRFVIGGPHGDAGLT 253
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK4_HORVU (S-adenosylmethionine synthetase 4 OS=Hordeum vulgare GN=SAM4 PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 1.360e-99
Identity = 141/151 (93.38%), Postives = 146/151 (96.69%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCR IGFVS+DVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET EFMPLSHVLATKLGA LTEVRKN+TC WLRPDGKTQVTVEY+NDNGAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   60 ITTKANVDYEKIVRDTCRGIGFVSNDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNATCPWLRPDGKTQVTVEYHNDNGAMVPIRVHTVLISTQHDETVTNDEIA 210

HSP 2 Score: 88.1965 bits (217), Expect = 1.360e-99
Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPE+YLDE TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  208 EIAADLKEHVIKPVIPEQYLDENTIFHLNPSGRFVIGGPHGDAGLT 253
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.360e-99
Identity = 140/151 (92.72%), Postives = 145/151 (96.03%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA+VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEYYNDNGAMVP+RVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKAQVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIA 207

HSP 2 Score: 91.2781 bits (225), Expect = 1.360e-99
Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPV+PEKYLDEKTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 1.774e-99
Identity = 142/151 (94.04%), Postives = 144/151 (95.36%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCRSIGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDET E MPLSHVLATK+GA LTEVRKN TC WLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 207

HSP 2 Score: 88.1965 bits (217), Expect = 1.774e-99
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++  DLKEHVIKP+IPEKYLD+KTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 1.774e-99
Identity = 142/151 (94.04%), Postives = 144/151 (95.36%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCRSIGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDET E MPLSHVLATK+GA LTEVRKN TC WLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 207

HSP 2 Score: 88.1965 bits (217), Expect = 1.774e-99
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++  DLKEHVIKP+IPEKYLD+KTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK2_ARATH (S-adenosylmethionine synthetase 2 OS=Arabidopsis thaliana GN=SAM2 PE=1 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 2.314e-99
Identity = 141/151 (93.38%), Postives = 144/151 (95.36%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA +DYEKIVRDTCRSIGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDET E MPLSHVLATK+GA LTEVRKN TC WLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA
Sbjct:   57 ITTKATIDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGARLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 207

HSP 2 Score: 88.1965 bits (217), Expect = 2.314e-99
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++  DLKEHVIKP+IPEKYLD+KTIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 EIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLT 250
[Close]
BLAST of CX290966 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.939e-99
Identity = 140/151 (92.72%), Postives = 145/151 (96.03%), Query Frame = 1 
Query:    1 ITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGAXLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 453
            ITTKA VDYEKIVRDTCRSIGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET EFMPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVPVRVHTV+ISTQHDETVTND+IA
Sbjct:   57 ITTKATVDYEKIVRDTCRSIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVVISTQHDETVTNDQIA 207

HSP 2 Score: 90.5077 bits (223), Expect = 3.939e-99
Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 2 
Query:  446 KLLADLKEHVIKPVIPEKYLDEKTIFHLNPSXRFVIGGPHGDAGLT 583
            ++ ADLKEHVIKPVIPEKYLDE+TIFHLNPS RFVIGGPHGDAGLT
Sbjct:  205 QIAADLKEHVIKPVIPEKYLDERTIFHLNPSGRFVIGGPHGDAGLT 250
The following BLAST results are available for this feature:
BLAST of CX290966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_POPTR2.113e-10092.72S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK1_ELAUM2.757e-10093.38S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK_CARPA6.120e-10094.04S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK_WHEAT1.360e-9993.38S-adenosylmethionine synthetase OS=Triticum aestiv... [more]
METK4_HORVU1.360e-9993.38S-adenosylmethionine synthetase 4 OS=Hordeum vulga... [more]
METK2_CATRO1.360e-9992.72S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK_BRARP1.774e-9994.04S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU1.774e-9994.04S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK2_ARATH2.314e-9993.38S-adenosylmethionine synthetase 2 OS=Arabidopsis t... [more]
METK1_CATRO3.939e-9992.72S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]

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Properties
Property NameValue
Genbank descriptionC03002C10Rv OF1 Citrus clementina cDNA clone C03002C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290966 ID=CX290966; Name=CX290966; organism=Citrus clementina; type=EST; length=613bp
ATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTG
CCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACGCCGATCACT
GCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATTGCCCAGGGT
GTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCA
GGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAATTTATGCCTT
TGAGCCATGTCCTTGCCACCAAACTTGGTGCTNGTCTCACGGAGGTTAGG
AAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCAC
TGTTGAGTACTACAACGACAATGGTGCCATGGTCCCAGTCCGTGTCCACA
CGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATT
GCTTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGT
ACCTTGATGAGAAAACCATCTTCCACCTTAATCCATCANGTCGTTTTGTC
ATTGGTGGGCCTCATGGTGATGCTGGTCTCACTTGGACGTAAGATCATCA
TCGACACTTATGG
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