CX291016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291016 vs. ExPASy Swiss-Prot
Match: LUC7L_MOUSE (Putative RNA-binding protein Luc7-like 1 OS=Mus musculus GN=Luc7l PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.102e-21 Identity = 61/148 (41.22%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 25 EMINEKLKKAEDLGEQGMVDEAQXXXXXXXXXXXXPARQEPTLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKL-------AELQEERNKKHKDRCDDRRSKER------SKDQDREPSRDREK 429 E I + L KAE LG +G VDE+Q E +S ++ QKLRVC++C A+L ++D+DRRLADHFGGKLHLG++QIR+KL AE QE+RN+ R ++R +ER S+ +DR SR R++ Sbjct: 131 EEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPASS---FQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLGRRSGSRTRDRRRSRSRDR 275
BLAST of CX291016 vs. ExPASy Swiss-Prot
Match: LUC7L_HUMAN (Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens GN=LUC7L PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.102e-21 Identity = 61/148 (41.22%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 25 EMINEKLKKAEDLGEQGMVDEAQXXXXXXXXXXXXPARQEPTLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKL-------AELQEERNKKHKDRCDDRRSKER------SKDQDREPSRDREK 429 E I + L KAE LG +G VDE+Q E +S ++ QKLRVC++C A+L ++D+DRRLADHFGGKLHLG++QIR+KL AE QE+RN+ R ++R +ER S+ +DR SR R++ Sbjct: 131 EEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPASS---FQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDR 275
BLAST of CX291016 vs. ExPASy Swiss-Prot
Match: LC7L2_MOUSE (Putative RNA-binding protein Luc7-like 2 OS=Mus musculus GN=Luc7l2 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.470e-21 Identity = 57/148 (38.51%), Postives = 83/148 (56.08%), Query Frame = 1 Query: 25 EMINEKLKKAEDLGEQGMVDEAQXXXXXXXXXXXXPARQEPTLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAEL-------QEERNKKHKDRCDDRRSKE-----RSKDQDREPSRDREKE 432 E I + L K E LG +G V+E+Q E +S ++ QKLRVC++C A+L ++D+DRRLADHFGGKLHLG+++IR+KL EL QE+RN++ R ++R +E RS+ + P R R +E Sbjct: 131 EEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPASS---FQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSRE 275
BLAST of CX291016 vs. ExPASy Swiss-Prot
Match: LC7L2_HUMAN (Putative RNA-binding protein Luc7-like 2 OS=Homo sapiens GN=LUC7L2 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 5.470e-21 Identity = 57/148 (38.51%), Postives = 83/148 (56.08%), Query Frame = 1 Query: 25 EMINEKLKKAEDLGEQGMVDEAQXXXXXXXXXXXXPARQEPTLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAEL-------QEERNKKHKDRCDDRRSKE-----RSKDQDREPSRDREKE 432 E I + L K E LG +G V+E+Q E +S ++ QKLRVC++C A+L ++D+DRRLADHFGGKLHLG+++IR+KL EL QE+RN++ R ++R +E RS+ + P R R +E Sbjct: 131 EEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPASS---FQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSRE 275
BLAST of CX291016 vs. ExPASy Swiss-Prot
Match: LC7L3_PONAB (Luc7-like protein 3 OS=Pongo abelii GN=LUC7L3 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.541e-15 Identity = 47/138 (34.06%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 25 EMINEKLKKAEDLGEQGMVDEAQXXXXXXXXXXXXPARQEPTLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAELQEERNKK--HKDRCDDRRSKERSKDQDREPSRDREKE 432 + I+ L++ E+LG +G V+EAQ + L S+ T ++++ VC++CGAFL V D+ R+ DH GK H+GY +I+ + EL+E+ K+ DR D+R KE+ + ++RE R+RE+E Sbjct: 134 DKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLK----EERELLRSTTSTIESFAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDR-DERLKKEKQEREEREKERERERE 266
BLAST of CX291016 vs. ExPASy Swiss-Prot
Match: LC7L3_MOUSE (Luc7-like protein 3 OS=Mus musculus GN=Luc7l3 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.541e-15 Identity = 47/138 (34.06%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 25 EMINEKLKKAEDLGEQGMVDEAQXXXXXXXXXXXXPARQEPTLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAELQEERNKK--HKDRCDDRRSKERSKDQDREPSRDREKE 432 + I+ L++ E+LG +G V+EAQ + L S+ T ++++ VC++CGAFL V D+ R+ DH GK H+GY +I+ + EL+E+ K+ DR D+R KE+ + ++RE R+RE+E Sbjct: 134 DKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLK----EERELLRSTTSTIESFAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDR-DERLKKEKQEREEREKERERERE 266
BLAST of CX291016 vs. ExPASy Swiss-Prot
Match: LC7L3_HUMAN (Luc7-like protein 3 OS=Homo sapiens GN=LUC7L3 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.541e-15 Identity = 47/138 (34.06%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 25 EMINEKLKKAEDLGEQGMVDEAQXXXXXXXXXXXXPARQEPTLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAELQEERNKK--HKDRCDDRRSKERSKDQDREPSRDREKE 432 + I+ L++ E+LG +G V+EAQ + L S+ T ++++ VC++CGAFL V D+ R+ DH GK H+GY +I+ + EL+E+ K+ DR D+R KE+ + ++RE R+RE+E Sbjct: 134 DKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLK----EERELLRSTTSTIESFAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDR-DERLKKEKQEREEREKERERERE 266
BLAST of CX291016 vs. ExPASy Swiss-Prot
Match: LC7L3_BOVIN (Luc7-like protein 3 OS=Bos taurus GN=LUC7L3 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.541e-15 Identity = 47/138 (34.06%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 25 EMINEKLKKAEDLGEQGMVDEAQXXXXXXXXXXXXPARQEPTLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAELQEERNKK--HKDRCDDRRSKERSKDQDREPSRDREKE 432 + I+ L++ E+LG +G V+EAQ + L S+ T ++++ VC++CGAFL V D+ R+ DH GK H+GY +I+ + EL+E+ K+ DR D+R KE+ + ++RE R+RE+E Sbjct: 134 DKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLK----EERELLRSTTSTIESFAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDR-DERLKKEKQEREEREKERERERE 266
BLAST of CX291016 vs. ExPASy Swiss-Prot
Match: LUC7_SCHPO (U1 snRNP-associated protein usp106 OS=Schizosaccharomyces pombe GN=usp106 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.483e-13 Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 1 Query: 190 TDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAELQEERNKKHKDRCDDRRSKERSKD 396 T QKL+VCDIC A+LS D+DRRLADHF GK+HLGY +R+ +L+ + + K R D++ E+ +D Sbjct: 183 THQKLQVCDICSAYLSRLDNDRRLADHFSGKMHLGYAMLRNIARDLRAQLEDREKSR--DKKDGEKQRD 249
BLAST of CX291016 vs. ExPASy Swiss-Prot
Match: YP68_CAEEL (Uncharacterized protein B0495.8 OS=Caenorhabditis elegans GN=B0495.8 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.753e-11 Identity = 41/140 (29.29%), Postives = 70/140 (50.00%), Query Frame = 1 Query: 13 ARTQEMINEKLKKAEDLGEQGMVDEAQXXXXXXXXXXXXPARQEPTLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRD---KLAELQEERNKKHKDRCDDRRSKERSKDQDREPSRDR 423 A +E I + + E LG +G ++E+ QE ++ A KLRVC+ CGA L++ D + R+ADH+ GK+H+G ++ R+ K+ E +ER K+ +++ +R +R + R RDR Sbjct: 127 AEIEEKIAKNVDDIEKLGNEGKIEESMKLHKYVEELREKI--QEIEDSQTEVKTAGPGSNSAKLRVCEDCGAQLNITDHESRIADHYNGKMHIGMVETRETYLKMKETIDERRKEREEKLGSQRGYQRRESYGR---RDR 261 The following BLAST results are available for this feature:
BLAST of CX291016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291016 ID=CX291016; Name=CX291016; organism=Citrus clementina; type=EST; length=547bpback to top |