CX291133

Overview
NameCX291133
Unique NameCX291133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7570 contig Ccv1_Contig7570:24..575. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291133 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 1.700e-70
Identity = 123/176 (69.89%), Postives = 135/176 (76.70%), Query Frame = 3
Query:   24 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG 551
            MGSL+ ER T GWAA+DPSG+LSPYTYTLR TG EDV+IK++YCGICHTDIHQIKNDLG SNYPM                 + F             CC+ CRPC+ADVEQYCNKKIWSYNDVYTDGKPTQGGF+  MVVDQKFVVKIPDGMA EQAAPLLCAGVTV+SPL+HFG
Sbjct:    1 MGSLEAERKTTGWAARDPSGVLSPYTYTLRETGPEDVFIKIIYCGICHTDIHQIKNDLGASNYPMVPGHEVVGEVVEVGSDVTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWSYNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFG 176          
BLAST of CX291133 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 1.591e-68
Identity = 118/176 (67.05%), Postives = 135/176 (76.70%), Query Frame = 3
Query:   24 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG 551
            MG L+ E+ TIGWAA+DPSG+LSPYTYTLRNTG EDV +KVLYCG+CHTD+HQ+KNDLGMSNYP+                 S F              CRNC PC+ D+EQYCNKKIW+ NDVYTDGKPTQGGFA+SMVVDQKFVVKIP+GMA EQAAPLLCAG+TV+SPL+HFG
Sbjct:    1 MGGLEVEKTTIGWAARDPSGVLSPYTYTLRNTGPEDVEVKVLYCGLCHTDLHQVKNDLGMSNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWNCNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFG 176          
BLAST of CX291133 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 1.591e-68
Identity = 119/176 (67.61%), Postives = 134/176 (76.14%), Query Frame = 3
Query:   24 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG 551
            MGSL+ ER T+GWAA+DPSG+LSPY YTLRNTG +DVY++V+ CGICHTD+HQIKNDLGMSNYPM                 + F              C NCRPC +D+EQYCNKKIWSYNDVY DGKPTQGGFA +MVVDQKFVVKIPDGMA EQAAPLLCAGVTV+SPL+HFG
Sbjct:    1 MGSLEVERKTVGWAARDPSGVLSPYEYTLRNTGPQDVYVEVMCCGICHTDVHQIKNDLGMSNYPMVPGHEVVGEVVEVGSEVTKFRAGDVVGVGCIVGSCGNCRPCNSDIEQYCNKKIWSYNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLNHFG 176          
BLAST of CX291133 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 5.119e-67
Identity = 116/177 (65.54%), Postives = 139/177 (78.53%), Query Frame = 3
Query:   24 MGSLDT-ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG 551
            MGS++  E+  +GWAA+DPSG+LSPY+YTLR+TGA+DVYIKV+ CGICHTDIHQIKNDLGMSNYPM                 S F             CC +C+PC +++EQYCNK+IWSYNDVYTDGKPTQGGFA++M+V+QKFVVKIP+GMA+EQAAPLLCAGVTV+SPLSHFG
Sbjct:    1 MGSVEAGEKKALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFG 177          
BLAST of CX291133 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 6.686e-67
Identity = 115/176 (65.34%), Postives = 133/176 (75.57%), Query Frame = 3
Query:   24 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG 551
            MGSLD E++ IGWAA+DPSG+LSPYTYTLRNTG EDV +KVLYCG+CH+D+HQ+KNDLGMSNYP+                 S F              CRNC PC+ ++EQYCNKKIW+ NDVYTDGKPTQGGFA SMVVDQ FVVKIP+GMA EQAAPLLCAG+TV+SP +HFG
Sbjct:    1 MGSLDVEKSAIGWAARDPSGLLSPYTYTLRNTGPEDVQVKVLYCGLCHSDLHQVKNDLGMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFG 176          
BLAST of CX291133 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 4.791e-65
Identity = 115/177 (64.97%), Postives = 135/177 (76.27%), Query Frame = 3
Query:   24 MGSLDT-ERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG 551
            MGS++  ER T+G AAKDPSGIL+PYTYTLRNTG +DVYIK+ YCG+CH+D+HQIKNDLGMSNYPM                 + F             CC++CR C++++EQYCNKKIWSYNDVYTDGK TQGGFAES VV+QKFVVKIP+G+A EQ APLLCAGVTV+SPLSHFG
Sbjct:    1 MGSIEAAERTTVGLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFG 177          
BLAST of CX291133 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 1.067e-64
Identity = 113/176 (64.20%), Postives = 133/176 (75.57%), Query Frame = 3
Query:   24 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG 551
            MGSL+TER  +GWAA D +G L+PYTY+LR+TG EDV+IKV+ CG+CHTDIHQIKNDLGMS+YPM                 + F              C+NC PC++++EQYCNKKIWSYNDVYTDGKPTQGGFAESMVV QKFVV+IPDGM+ EQAAPLLCAG+TV+SPL HFG
Sbjct:    1 MGSLETERKIVGWAATDSTGHLAPYTYSLRDTGPEDVFIKVISCGVCHTDIHQIKNDLGMSHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVGVGVIVGSCKNCHPCKSEIEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVYSPLKHFG 176          
BLAST of CX291133 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 6.918e-64
Identity = 112/176 (63.64%), Postives = 130/176 (73.86%), Query Frame = 3
Query:   24 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG 551
            MGSL+ ER T GWAA+DPSG+LSPYTY+LRNTG ED+YIKVL CGICH+DIHQIKNDLGMS+YPM                 + +             CCR+C PC +D EQYCNKKIW+YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+SPL  FG
Sbjct:    1 MGSLEKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFG 176          
BLAST of CX291133 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 9.036e-64
Identity = 114/176 (64.77%), Postives = 128/176 (72.73%), Query Frame = 3
Query:   24 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG 551
            MGSL +ER  +GWAA+D +G LSPY+YTLRNTG EDV +KVLYCGICHTDIHQ KN LG S YPM                 + +             CCR C PC+A+VEQYCNKKIWSYNDVYTDG+PTQGGFA +MVVDQKFVVKIP G+A EQAAPLLCAGVTV+SPL HFG
Sbjct:    1 MGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFG 176          
BLAST of CX291133 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 9.036e-64
Identity = 111/176 (63.07%), Postives = 130/176 (73.86%), Query Frame = 3
Query:   24 MGSLDTERATIGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFG 551
            MGSL+ ER T GWAA+DPSG+LSPYTY+LRNTG ED+YIKVL CG+CH+DIHQIKNDLGMS+YPM                 + +             CCR+C PC +D EQYCNKKIW+YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+SPL  FG
Sbjct:    1 MGSLEKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGVCHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFG 176          
The following BLAST results are available for this feature:
BLAST of CX291133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
CADH1_ARACO1.700e-7069.89Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH1_TOBAC1.591e-6867.05Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH1_OCIBA1.591e-6867.61Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH4_ARATH5.119e-6765.54Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH2_TOBAC6.686e-6765.34Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH_MEDSA4.791e-6564.97Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH_POPDE1.067e-6464.20Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH_EUCGL6.918e-6463.64Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH_MAIZE9.036e-6464.77Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH2_EUCGU9.036e-6463.07Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]

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Properties
Property NameValue
Genbank descriptionC03004E02SK OF2 Citrus clementina cDNA clone C03004E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291133 ID=CX291133; Name=CX291133; organism=Citrus clementina; type=EST; length=552bp
CTAAAACGAAAAAGTCACAAAAAATGGGAAGCCTTGATACCGAGAGAGCA
ACGATAGGGTGGGCTGCAAAGGATCCATCTGGGATTCTGTCACCTTACAC
TTACACTCTCAGAAACACAGGAGCAGAAGATGTTTACATTAAGGTTCTTT
ACTGTGGAATCTGCCACACTGATATTCATCAAATAAAAAATGATCTGGGC
ATGTCTAACTATCCAATGGTTCCAGGACATGAGGTGGTGGGTGAAGTGAA
GGAAGTGGGTTCAGAAGTGAGCAACTTTAAAGTAGGAGACAAGGTTGGTG
TTGGGGTTCTCGTTGGTTGTTGCAGAAACTGCAGGCCGTGCGAGGCAGAT
GTTGAGCAGTACTGCAACAAGAAAATCTGGTCCTATAACGATGTTTACAC
CGATGGCAAGCCTACACAAGGCGGCTTTGCTGAGTCCATGGTCGTTGATC
AAAAGTTTGTGGTGAAAATACCAGATGGAATGGCACTGGAGCAGGCGGCA
CCGCTATTGTGTGCTGGTGTGACAGTGTTCAGTCCCCTGAGCCACTTTGG
AT
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