CX291145

Overview
NameCX291145
Unique NameCX291145
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length502
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15524 contig Ccv1_Contig15524:472..973. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291145 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 4.795e-47
Identity = 93/167 (55.69%), Postives = 116/167 (69.46%), Query Frame = 2
Query:    2 VDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKQFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLAETLFELLSLALGLKAEHLQEIGCPKEYTLLCHYYPSCPQPDLTLGASGHSDPSFLTI 502
            V+++  AAE WGFFQV+NHGIP++VLE+MI+GIR+F+EQD E+KK FY+RD    + ++SNFDL  S  ANWRDTL     A     P + P  C + + EY K V KL + LFELLS ALGL   HL+++ C     LL HYYP CPQPDLTLG + HSD SFLTI
Sbjct:   81 VEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYT-APDPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTI 246          
BLAST of CX291145 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.822e-46
Identity = 86/167 (51.50%), Postives = 116/167 (69.46%), Query Frame = 2
Query:    2 VDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKQFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLAETLFELLSLALGLKAEHLQEIGCPKEYTLLCHYYPSCPQPDLTLGASGHSDPSFLTI 502
            +++++ AA  WGFFQV+NHG+ L +LE+M +G+R F+EQ  E++K+FY+RD +R   + SNFDL  S  ANWRDT + +    T   P + PE+CRD + EY K V  L + LFELLS ALGL+  HL ++ C K   +L HYYP CP+PDLTLG S HSD SFLT+
Sbjct:   84 IEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFSCTMAPDTP-KPQDLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTV 249          
BLAST of CX291145 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.306e-44
Identity = 84/167 (50.30%), Postives = 120/167 (71.86%), Query Frame = 2
Query:    2 VDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKQFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLAETLFELLSLALGLKAEHLQEIGCPKEYTLLCHYYPSCPQPDLTLGASGHSDPSFLTI 502
            V +V+ A E +GFFQ +NHG+PL+V+E+MI GIR+F++QD E++K FYTRD+T+ ++++SN DL+ S  A+WRDTL+   +A       + PEVC + + EY K V KLAE +FE+LS ALGL   HL+E+ C K   +LCH +P CP+P+ T G + H+D SFLTI
Sbjct:   74 VAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASWRDTLS-CVMAPDVPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTI 239          
BLAST of CX291145 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.705e-44
Identity = 84/167 (50.30%), Postives = 113/167 (67.66%), Query Frame = 2
Query:    2 VDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKQFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLAETLFELLSLALGLKAEHLQEIGCPKEYTLLCHYYPSCPQPDLTLGASGHSDPSFLTI 502
            ++ ++ AA  WGFFQV+NHG+ L +LE+M +G+R F+EQ  E++K  Y+RD  R   + SNFDL+ +  ANWRDT     +A    +P + PE+CRD + EY K V  L E LFELLS ALGL   HL+++ C K   +LCHY+P CP+PDLT G S HSD SFLT+
Sbjct:   84 IEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANWRDTF-YCYMAPDPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTV 249          
BLAST of CX291145 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 2.227e-44
Identity = 85/168 (50.60%), Postives = 119/168 (70.83%), Query Frame = 2
Query:    2 VDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKQFYTRDR-TRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLAETLFELLSLALGLKAEHLQEIGCPKEYTLLCHYYPSCPQPDLTLGASGHSDPSFLTI 502
            V+++  A+E +GFFQ+VNHGIP +V+++M++G+RKF+EQD ++K+Q+Y+RDR  +N  ++SN+ L      NWRDT+    + S   DP E+P+VCRD + +Y   V  L   LFELLS ALGLK  HL+E+ C +   LL HYYP+CPQP+LT G S HSD  FLTI
Sbjct:  110 VEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSRDRFNKNFLYSSNYVLIPGIACNWRDTMEC-IMNSNQPDPQEFPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTI 276          
BLAST of CX291145 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.309e-36
Identity = 79/169 (46.75%), Postives = 109/169 (64.50%), Query Frame = 2
Query:    2 VDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKQFYTRDRTRNVRFNSNFDLHYSR--TANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLAETLFELLSLALGLKAEHLQEIGCPKEYTLLCHYYPSCPQPDLTLGASGHSDPSFLTI 502
            VD+VR A+E WGFFQVVNHGIP +VL+  ++G R+F EQD E+KKQ+YTRD  + V + SN DL+ S    A+WRDT+    +A       E+P  C +++ ++ K+V KL  TL ELLS  LGL   +L++          C+YYP CPQP+LT+G   H+D  F+TI
Sbjct:   77 VDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTI-FCYMAPNPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTI 244          
BLAST of CX291145 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.581e-18
Identity = 57/164 (34.76%), Postives = 81/164 (49.39%), Query Frame = 2
Query:   20 AAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKQFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYP---EVCRDAVREYIKNVTKLAETLFELLSLALGLKAEHLQEIGCPKEYTLLCHYYPSCPQPDLTLGASGHSDPSFLTI 502
            A E WG FQVV+HGI   ++ EM    R+F     E K ++ T    R   F  +  L      +WR+ +T  +      D + +P   E  R     Y + +  L   L E+LS A+GL+   L +     E  +L +YYP+CPQPDLTLG   H+DP  +TI
Sbjct:   64 ACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRG-GFTISTVLQGDDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITI 226          
BLAST of CX291145 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.581e-18
Identity = 55/168 (32.74%), Postives = 85/168 (50.60%), Query Frame = 2
Query:    8 QVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKQFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVR---EYIKNVTKLAETLFELLSLALGLKAEHLQEIGCPKEYTLLCHYYPSCPQPDLTLGASGHSDPSFLTI 502
            Q+  A E WG FQVV+HG+  N++ +M    R F     E K +F      +   F  +  L      +WR+ +T  +    + D + +P+     V+   EY + +  LA  L E+LS A+GL+ E L       +  ++ +YYP CPQPDLTLG   H+DP  +T+
Sbjct:   59 QIVEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKG-GFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITL 225          
BLAST of CX291145 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 6.108e-18
Identity = 57/171 (33.33%), Postives = 86/171 (50.29%), Query Frame = 2
Query:    5 DQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKQFYTRDRTRNVR--FNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEV---CRDAVREYIKNVTKLAETLFELLSLALGLKAEHLQEIGCPKEYTLLCHYYPSCPQPDLTLGASGHSDPSFLTI 502
            D++  A E WG FQVV+HG+   +L +M    R F     + K +F   D T   +  F  +  L      +WR+ +T  +      D + +P+     R    EY K +  LA  L E+LS A+GL+ E L +     +  ++ +YYP CPQPDLTLG   H+DP  +T+
Sbjct:   56 DEIVKACEDWGIFQVVDHGVDTKLLSDMTGLARDFFHLPTQEKLRF---DMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIKARDYSRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITL 223          
BLAST of CX291145 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.321e-17
Identity = 56/166 (33.73%), Postives = 84/166 (50.60%), Query Frame = 2
Query:   20 AAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKQFYTRDRTRNVR--FNSNFDLHYSRTANWRDTLTISALASTDLDPNEYP---EVCRDAVREYIKNVTKLAETLFELLSLALGLKAEHLQEIGCPKEYTLLCHYYPSCPQPDLTLGASGHSDPSFLTI 502
            A E WG FQVV+HGI ++++ EM    R+F     E K +F   D T   +  F  +  L      +WR+ +T  +      D + +P   E  R     Y   +  LA  L E+LS A+GL+ E L +     +  ++ +YYP CPQP+LTLG   H+DP  +T+
Sbjct:   64 ACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRF---DMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACVDMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITL 226          
The following BLAST results are available for this feature:
BLAST of CX291145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ACCH1_ARATH4.795e-4755.691-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH3_ARATH1.822e-4651.501-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GSL_ARATH1.306e-4450.30Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
ACCH2_ARATH1.705e-4450.301-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
DV4H_CATRO2.227e-4450.60Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCH3_SOLLC1.309e-3646.751-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FNSI_PETCR3.581e-1834.76Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
FL3H_ARATH3.581e-1832.74Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FL3H_CALCH6.108e-1833.33Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FL3H_PETCR2.321e-1733.73Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]

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Properties
Property NameValue
Genbank descriptionC03004F03SK OF2 Citrus clementina cDNA clone C03004F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291145 ID=CX291145; Name=CX291145; organism=Citrus clementina; type=EST; length=502bp
TGTTGATCAAGTTCGGGCTGCAGCAGAGACATGGGGCTTCTTTCAAGTGG
TGAATCACGGTATTCCCTTAAATGTGTTGGAAGAGATGATTGAAGGGATA
CGCAAGTTTAATGAACAAGATGTTGAGTTGAAGAAACAGTTTTATACCCG
TGACCGGACAAGAAATGTCAGATTCAACAGCAACTTTGATCTGCATTACT
CCCGGACAGCTAATTGGAGGGACACGTTGACAATTTCTGCTTTAGCTTCC
ACCGATTTAGACCCCAACGAATACCCAGAAGTTTGCAGAGATGCTGTGAG
AGAGTACATTAAAAATGTCACAAAATTGGCTGAAACTCTGTTTGAATTAT
TATCACTGGCTCTTGGGCTGAAGGCTGAACATTTACAAGAGATTGGATGC
CCTAAAGAATACACCCTTCTCTGCCACTACTATCCATCTTGCCCTCAGCC
AGATTTGACATTGGGAGCTAGCGGGCATTCAGACCCTTCATTTCTTACCA
TT
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