CX291196

Overview
NameCX291196
Unique NameCX291196
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length414
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291196 vs. ExPASy Swiss-Prot
Match: M3K1_ARATH (Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 2.226e-55
Identity = 103/138 (74.64%), Postives = 117/138 (84.78%), Query Frame = 3
Query:    3 SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK-GYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDS 413
            SLL LYQRY LRDS VS YTRQIL GLKYLHD+  +HRDIKCANILVDANG+VKLADFGLAK +K ND+KSC+GT FWMAPEVIN K+  GYG PADIWSLGCTVLEM T QIPY+ +E + ALF+IGRG+ P +PD+
Sbjct:  418 SLLKLYQRYQLRDSVVSLYTRQILDGLKYLHDKGFIHRDIKCANILVDANGAVKLADFGLAKVSKFNDIKSCKGTPFWMAPEVINRKDSDGYGSPADIWSLGCTVLEMCTGQIPYSDLEPVQALFRIGRGTLPEVPDT 555          
BLAST of CX291196 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 9.081e-41
Identity = 91/140 (65.00%), Postives = 100/140 (71.43%), Query Frame = 3
Query:    3 SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF--WMAPEVINNKN--KGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPD 410
            SL  LYQR  L DS VS YTRQIL GLKYLHD+  +HR+IKCAN+LVDANG+VKLADFGLAK      V S   T +  WMAPEVI N     GYG PADIWSLGCTVLEMLT QIPY+ +E   AL+ IG G  P IPD
Sbjct: 1711 SLRKLYQRNQLGDSVVSLYTRQILDGLKYLHDKGFIHRNIKCANVLVDANGTVKLADFGLAK------VMSLWRTPYWNWMAPEVILNPKDYDGYGTPADIWSLGCTVLEMLTGQIPYSDLEIGTALYNIGTGKLPKIPD 1844          
BLAST of CX291196 vs. ExPASy Swiss-Prot
Match: M3K3_MOUSE (Mitogen-activated protein kinase kinase kinase 3 OS=Mus musculus GN=Map3k3 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.105e-29
Identity = 67/131 (51.15%), Postives = 88/131 (67.18%), Query Frame = 3
Query:   33 LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL-----NDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIG-RGSPPPIP 407
            L +S    YTRQIL G+ YLH   +VHRDIK ANIL D+ G+VKL DFG +K  +        ++S  GT +WM+PEVI+   +GYG  AD+WSLGCTV+EMLT + P+A  E MAA+FKI  + + P +P
Sbjct:  461 LTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVIS--GEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLP 589          
BLAST of CX291196 vs. ExPASy Swiss-Prot
Match: ANP1_ARATH (Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 6.105e-29
Identity = 68/131 (51.91%), Postives = 91/131 (69.47%), Query Frame = 3
Query:   39 DSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFG----LAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPM-ECMAALFKIG-RGSPPPIPDS 413
            +S V  YTRQ+LLGL+YLH+  ++HRDIK ANILVD  G +KLADFG    +A+   +   KS +GT +WMAPEVI     G+   ADIWS+GCTV+EM+T + P++   + +AA+F IG   S PPIPD+
Sbjct:  171 ESVVRTYTRQLLLGLEYLHNHAIMHRDIKGANILVDNKGCIKLADFGASKQVAELATMTGAKSMKGTPYWMAPEVI--LQTGHSFSADIWSVGCTVIEMVTGKAPWSQQYKEVAAIFFIGTTKSHPPIPDT 299          
BLAST of CX291196 vs. ExPASy Swiss-Prot
Match: M3K3_HUMAN (Mitogen-activated protein kinase kinase kinase 3 OS=Homo sapiens GN=MAP3K3 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.041e-28
Identity = 67/131 (51.15%), Postives = 88/131 (67.18%), Query Frame = 3
Query:   33 LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL-----NDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIG-RGSPPPIP 407
            L +S    YTRQIL G+ YLH   +VHRDIK ANIL D+ G+VKL DFG +K  +        ++S  GT +WM+PEVI+   +GYG  AD+WSLGCTV+EMLT + P+A  E MAA+FKI  + + P +P
Sbjct:  461 LTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGMRSVTGTPYWMSPEVIS--GEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLP 589          
BLAST of CX291196 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.041e-28
Identity = 67/131 (51.15%), Postives = 91/131 (69.47%), Query Frame = 3
Query:   39 DSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFG----LAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPM-ECMAALFKIG-RGSPPPIPDS 413
            +S V  YT Q+LLGL+YLH+  ++HRDIK ANILVD  G +KLADFG    +A+   ++  KS +GT +WMAPEVI     G+   ADIWS+GCTV+EM+T + P++   + +AA+F IG   S PPIPD+
Sbjct:  170 ESVVRTYTNQLLLGLEYLHNHAIMHRDIKGANILVDNQGCIKLADFGASKQVAELATISGAKSMKGTPYWMAPEVI--LQTGHSFSADIWSVGCTVIEMVTGKAPWSQQYKEIAAIFHIGTTKSHPPIPDN 298          
BLAST of CX291196 vs. ExPASy Swiss-Prot
Match: BCK1_YEAST (Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS=Saccharomyces cerevisiae GN=BCK1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.360e-28
Identity = 62/140 (44.29%), Postives = 94/140 (67.14%), Query Frame = 3
Query:    3 SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK---LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRG-SPPPIPD 410
            SL+ +Y R+   +  +   T Q+L GL YLH + ++HRD+K  N+L+D +G  K++DFG+++ +K    N   + RGT FWMAPE+++ K +GY    DIWSLGC VLEM   + P++ +E +AA+FKIG+  S PPIP+
Sbjct: 1267 SLIRMYGRFD--EPLIKHLTTQVLKGLAYLHSKGILHRDMKADNLLLDQDGICKISDFGISRKSKDIYSNSDMTMRGTVFWMAPEMVDTK-QGYSAKVDIWSLGCIVLEMFAGKRPWSNLEVVAAMFKIGKSKSAPPIPE 1403          
BLAST of CX291196 vs. ExPASy Swiss-Prot
Match: Y8901_DICDI (Probable serine/threonine-protein kinase DDB_G0278901 OS=Dictyostelium discoideum GN=DDB_G0278901 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.030e-28
Identity = 65/131 (49.62%), Postives = 88/131 (67.18%), Query Frame = 3
Query:   33 LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS------CRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIP 407
            L +S V+ Y  Q+L GL+YLH Q V+HRDIK AN+L+  +GS+KLADFG+  ATK++D+ S        GT +WMAPEVI  + +G     D+WSLGCT++E+LT   PY  +   AAL+KI +   PPIP
Sbjct:  119 LPESLVTVYIAQVLNGLEYLHRQGVIHRDIKAANLLISTDGSIKLADFGV--ATKVSDLSSDNPDDTFAGTPYWMAPEVI--QMQGISTACDVWSLGCTIIELLTGTPPYFGLAPAAALYKIVQEDHPPIP 245          
BLAST of CX291196 vs. ExPASy Swiss-Prot
Match: YSK4_HUMAN (SPS1/STE20-related protein kinase YSK4 OS=Homo sapiens GN=YSK4 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.168e-28
Identity = 66/128 (51.56%), Postives = 83/128 (64.84%), Query Frame = 3
Query:   57 YTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK--------ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIG--RGSPPPIPD 410
            YT+QIL G+ YLH+  VVHRDIK  N+++   G +KL DFG A+         T  + +KS  GT +WMAPEVIN    GYG  +DIWS+GCTV EM T + P A M+ MAA+F IG  RG  PP+PD
Sbjct: 1166 YTKQILQGVAYLHENCVVHRDIKGNNVMLMPTGIIKLIDFGCARRLAWAGLNGTHSDMLKSMHGTPYWMAPEVIN--ESGYGRKSDIWSIGCTVFEMATGKPPLASMDRMAAMFYIGAHRGLMPPLPD 1291          
BLAST of CX291196 vs. ExPASy Swiss-Prot
Match: M3K2_HUMAN (Mitogen-activated protein kinase kinase kinase 2 OS=Homo sapiens GN=MAP3K2 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 6.750e-28
Identity = 66/131 (50.38%), Postives = 87/131 (66.41%), Query Frame = 3
Query:   33 LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL-----NDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIG-RGSPPPIP 407
            L ++    YTRQIL G+ YLH   +VHRDIK ANIL D+ G+VKL DFG +K  +        +KS  GT +WM+PEVI+   +GYG  ADIWS+ CTV+EMLT + P+A  E MAA+FKI  + + P +P
Sbjct:  455 LTENVTRKYTRQILEGVHYLHSNMIVHRDIKGANILRDSTGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVIS--GEGYGRKADIWSVACTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPKLP 583          
The following BLAST results are available for this feature:
BLAST of CX291196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
M3K1_ARATH2.226e-5574.64Mitogen-activated protein kinase kinase kinase 1 O... [more]
WRK19_ARATH9.081e-4165.00Probable WRKY transcription factor 19 OS=Arabidops... [more]
M3K3_MOUSE6.105e-2951.15Mitogen-activated protein kinase kinase kinase 3 O... [more]
ANP1_ARATH6.105e-2951.91Mitogen-activated protein kinase kinase kinase ANP... [more]
M3K3_HUMAN1.041e-2851.15Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K2_ARATH1.041e-2851.15Mitogen-activated protein kinase kinase kinase 2 O... [more]
BCK1_YEAST1.360e-2844.29Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS... [more]
Y8901_DICDI3.030e-2849.62Probable serine/threonine-protein kinase DDB_G0278... [more]
YSK4_HUMAN5.168e-2851.56SPS1/STE20-related protein kinase YSK4 OS=Homo sap... [more]
M3K2_HUMAN6.750e-2850.38Mitogen-activated protein kinase kinase kinase 2 O... [more]

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Properties
Property NameValue
Genbank descriptionC03005B12SK OF2 Citrus clementina cDNA clone C03005B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291196 ID=CX291196; Name=CX291196; organism=Citrus clementina; type=EST; length=414bp
GCTCCCTTTTAAATCTCTATCAGCGGTATCATCTACGAGATTCCCAGGTC
TCTGCCTACACAAGACAGATTCTGCTTGGTTTGAAGTATCTTCACGACCA
AGATGTTGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCGA
ATGGATCAGTGAAACTTGCTGATTTCGGATTGGCAAAGGCCACCAAATTG
AATGATGTAAAATCTTGCAGAGGGACTGCATTCTGGATGGCCCCAGAGGT
TATTAATAATAAGAACAAAGGTTATGGGCTTCCAGCTGATATATGGAGCC
TTGGCTGCACTGTGTTGGAGATGTTAACCAGTCAAATTCCGTATGCTCCT
ATGGAATGTATGGCGGCATTGTTCAAGATTGGAAGGGGTTCACCACCACC
TATTCCTGATAGTC
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