CX291248

Overview
NameCX291248
Unique NameCX291248
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length253
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN2_PERAE (Endoglucanase 2 (Fragment) OS=Persea americana GN=CEL2 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.170e-32
Identity = 64/84 (76.19%), Postives = 67/84 (79.76%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            MSYMVGFGERYPQHVHHRGSSLPS+HAHP+ I CN GFQYLYS SPNPN+L GAILGGP            YQQSEPATYINAP
Sbjct:   32 MSYMVGFGERYPQHVHHRGSSLPSVHAHPNPIPCNAGFQYLYSSSPNPNILVGAILGGPDSRDSFSDDRNNYQQSEPATYINAP 115          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN1_PERAE (Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.386e-31
Identity = 61/84 (72.62%), Postives = 64/84 (76.19%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            MSYMVGFGERYPQHVHHRGSSLPS+  HP+ I CN GFQYLYS  PNPN+L GAILGGP            YQQSEPATYINAP
Sbjct:  396 MSYMVGFGERYPQHVHHRGSSLPSVQVHPNSIPCNAGFQYLYSSPPNPNILVGAILGGPDNRDSFSDDRNNYQQSEPATYINAP 479          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN23_ORYSJ (Endoglucanase 23 OS=Oryza sativa subsp. japonica GN=GLU12 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.031e-25
Identity = 51/84 (60.71%), Postives = 60/84 (71.43%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            MSYMVG+G+RYPQ +HHRGSSLPSI +HP  IACNDG  Y  S SPNPN L GA++GGP            +++SEP TYINAP
Sbjct:  411 MSYMVGYGDRYPQRIHHRGSSLPSIKSHPQRIACNDGTPYYNSSSPNPNPLIGAVVGGPGEDDVYEDDRADFRKSEPTTYINAP 494          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN19_ORYSJ (Endoglucanase 19 OS=Oryza sativa subsp. japonica GN=Os08g0114200 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.001e-24
Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            MSYMVGFG RYP+  HHRG+S+PS+ AHP  I+C+ GF YL+S  PNPNVL GA++GGP            + QSEPATYINAP
Sbjct:  427 MSYMVGFGCRYPRRAHHRGASMPSVRAHPGRISCDAGFGYLHSGEPNPNVLVGAVVGGPDSRDAFADDRGNFAQSEPATYINAP 510          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN8_ARATH (Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.821e-24
Identity = 45/84 (53.57%), Postives = 61/84 (72.62%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            +SYMVG+G+++P+ +HHRGSS+PS+ AHP HI C +G +Y  S +PNPN+L GA++GGP            +QQSEP TYINAP
Sbjct:  394 LSYMVGYGQKFPRRIHHRGSSVPSVSAHPSHIGCKEGSRYFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFQQSEPTTYINAP 477          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN4_ORYSJ (Endoglucanase 4 OS=Oryza sativa subsp. japonica GN=GLU14 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.297e-23
Identity = 46/84 (54.76%), Postives = 61/84 (72.62%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            MSYMVGFG RYP+HVHHRG+S+PS+  HP  I C++GF+YL+S  P+ N+L+GA++GGP            Y Q+EP+TY NAP
Sbjct:  403 MSYMVGFGARYPRHVHHRGASMPSVRDHPARIGCDEGFRYLHSPEPDRNLLAGAVVGGPDAGDAFADGRDNYAQAEPSTYTNAP 486          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN4_ARATH (Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g23210 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.297e-23
Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            MSYMVG+G R+PQ +HHRGSS+PS+  HPD I C DG +Y +S +PNPN+L GA++GGP            +Q +EP TYINAP
Sbjct:  394 MSYMVGYGSRFPQKIHHRGSSVPSVVDHPDRIGCKDGSRYFFSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAP 477          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN24_ARATH (Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39010 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.928e-23
Identity = 48/84 (57.14%), Postives = 58/84 (69.05%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            +SYMVG+GERYP+ +HHRGSSLPSI  HP+ I C DG  Y  S  PNPNVL GA++GGP            +++SEP TYINAP
Sbjct:  399 LSYMVGYGERYPKRIHHRGSSLPSIVDHPEAIRCKDGSVYFNSTEPNPNVLIGAVVGGPGEDDMYDDDRSDFRKSEPTTYINAP 482          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN1_ARATH (Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.928e-23
Identity = 48/84 (57.14%), Postives = 58/84 (69.05%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            MSYMVG+G +YP+ +HHRGSSLPS+  HP  I C+DGF    S+SPNPN L GA++GGP            Y +SEPATYINAP
Sbjct:  407 MSYMVGYGLKYPRRIHHRGSSLPSVAVHPTRIQCHDGFSLFTSQSPNPNDLVGAVVGGPDQNDQFPDERSDYGRSEPATYINAP 490          
BLAST of CX291248 vs. ExPASy Swiss-Prot
Match: GUN17_ARATH (Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.446e-22
Identity = 45/84 (53.57%), Postives = 59/84 (70.24%), Query Frame = 1
Query:    1 MSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLSGAILGGPXXXXXXXXXXXXYQQSEPATYINAP 252
            MSYMVG+G ++P+ +HHRGSSLP + +HP  I C+ GF  + S+SPNPN L GA++GGP            Y+QSEPATYIN+P
Sbjct:  418 MSYMVGYGPKFPRRIHHRGSSLPCVASHPAKIQCHQGFAIMNSQSPNPNFLVGAVVGGPDQHDRFPDERSDYEQSEPATYINSP 501          
The following BLAST results are available for this feature:
BLAST of CX291248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
GUN2_PERAE1.170e-3276.19Endoglucanase 2 (Fragment) OS=Persea americana GN=... [more]
GUN1_PERAE8.386e-3172.62Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 S... [more]
GUN23_ORYSJ4.031e-2560.71Endoglucanase 23 OS=Oryza sativa subsp. japonica G... [more]
GUN19_ORYSJ2.001e-2459.52Endoglucanase 19 OS=Oryza sativa subsp. japonica G... [more]
GUN8_ARATH5.821e-2453.57Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE... [more]
GUN4_ORYSJ1.297e-2354.76Endoglucanase 4 OS=Oryza sativa subsp. japonica GN... [more]
GUN4_ARATH1.297e-2354.76Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g232... [more]
GUN24_ARATH4.928e-2357.14Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39... [more]
GUN1_ARATH4.928e-2357.14Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE... [more]
GUN17_ARATH2.446e-2253.57Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02... [more]

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Properties
Property NameValue
Genbank descriptionC03005G11SK OF2 Citrus clementina cDNA clone C03005G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291248 ID=CX291248; Name=CX291248; organism=Citrus clementina; type=EST; length=253bp
ATGTCTTACATGGTGGGCTTCGGAGAGAGGTATCCGCAACATGTTCATCA
CAGGGGTTCATCTCTACCGTCCATCCATGCACATCCTGATCACATTGCCT
GCAACGATGGATTCCAGTACCTCTACTCTAGATCACCCAATCCAAATGTT
CTCAGTGGAGCTATATTAGGTGGGCCTGATAATAGAGACAATTTTGCCGA
TAATCGTAATAATTATCAGCAGTCAGAACCAGCTACATACATCAATGCGC
CGT
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