CX291262

Overview
NameCX291262
Unique NameCX291262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length347
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11050 contig Ccv1_Contig11050:695..1041. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 204.527 bits (519), Expect = 1.329e-52
Identity = 100/115 (86.96%), Postives = 107/115 (93.04%), Query Frame = 3
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNNE+LL DEFYIGLRQ+RA GQEY+ELLHEFMTAVK NYGE++LIQFEDFANHNAFDLL KYGTTHLVFNDDIQGTA+VVLAGLISA+K LGGSLAD  FLFLGA EAGTG
Sbjct:  231 DVGTNNEQLLKDEFYIGLRQRRATGQEYSELLHEFMTAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTTHLVFNDDIQGTAAVVLAGLISALKLLGGSLADHTFLFLGAGEAGTG 345          
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.919e-51
Identity = 97/115 (84.35%), Postives = 109/115 (94.78%), Query Frame = 3
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNNEK+L+DEFYIGLRQ+RA G+EYAEL++EFM+AVK NYGE++LIQFEDFANHNAFDLLEKY TTHLVFNDDIQGTASVVLAGLISA+K +GGSLAD +FLFLGA EAGTG
Sbjct:  287 DVGTNNEKMLNDEFYIGLRQRRASGKEYAELMNEFMSAVKQNYGEKVLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQGTASVVLAGLISALKLVGGSLADHKFLFLGAGEAGTG 401          
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 3.273e-51
Identity = 100/116 (86.21%), Postives = 108/116 (93.10%), Query Frame = 3
Query:    3 DVGTNNEKLL-DDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNNEKLL DDEFYIGL+QKRA GQEYAEL++EFM+AVK NYGE +LIQFEDFANHNAFDLLEKY TTHLVFNDDIQGTASVVL GLISA+K +GGSLADQ+FLFLGA EAGTG
Sbjct:  287 DVGTNNEKLLNDDEFYIGLKQKRAAGQEYAELMNEFMSAVKQNYGENLLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQGTASVVLGGLISALKLVGGSLADQKFLFLGAGEAGTG 402          
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.771e-50
Identity = 94/115 (81.74%), Postives = 107/115 (93.04%), Query Frame = 3
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNN+KLLDDEFYIGL+QKRA G+EYAE + EFM+AVK NYGE+IL+QFEDFANHNAF+LLEKY TTHLVFNDDIQGTASVVLAGLI+++K LGG+LAD +FLFLGA EAGTG
Sbjct:  225 DVGTNNQKLLDDEFYIGLKQKRATGEEYAEFVQEFMSAVKQNYGEKILVQFEDFANHNAFELLEKYRTTHLVFNDDIQGTASVVLAGLIASLKLLGGTLADHKFLFLGAGEAGTG 339          
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.986e-48
Identity = 91/115 (79.13%), Postives = 104/115 (90.43%), Query Frame = 3
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNNEKLL+DEFYIGLRQ+RA GQEYA  L EFM AVK NYGE++L+QFEDFANHNAFDLLEKY ++HLVFNDDIQGTASVVLAGL++++K +GG+LAD  FLFLGA EAGTG
Sbjct:  229 DVGTNNEKLLNDEFYIGLRQRRATGQEYATFLDEFMRAVKQNYGEKVLVQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTG 343          
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 2.593e-48
Identity = 90/115 (78.26%), Postives = 104/115 (90.43%), Query Frame = 3
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNNEKLL +EFYIGL+Q+RA G+EY+E L EFM+ VK NYGE++LIQFEDFANHNAFDLL KYGTTHL FNDDIQGTASVVLAG++SA++ LGG+LAD +FLFLGA EAGTG
Sbjct:  231 DVGTNNEKLLANEFYIGLKQRRATGKEYSEFLQEFMSPVKQNYGEKVLIQFEDFANHNAFDLLAKYGTTHLAFNDDIQGTASVVLAGIVSALRLLGGTLADHKFLFLGAGEAGTG 345          
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 4.891e-47
Identity = 90/115 (78.26%), Postives = 104/115 (90.43%), Query Frame = 3
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNNE LL+DEFYIGLRQKRA G+EY EL+ EFM+AVK  YGE++LIQFEDFANHNAFDLLEKY  +HLVFNDDIQGTASVVLAGL++A+K +GG+LA+Q +LFLGA EAGTG
Sbjct:  276 DVGTNNEFLLNDEFYIGLRQKRATGEEYDELIEEFMSAVKQFYGEKVLIQFEDFANHNAFDLLEKYSKSHLVFNDDIQGTASVVLAGLLAALKMVGGTLAEQTYLFLGAGEAGTG 390          
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 1.205e-45
Identity = 87/115 (75.65%), Postives = 103/115 (89.57%), Query Frame = 3
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGTNNE+LL+DEFYIGLRQ+RA G+EY EL+ EFM+AVK  YGE++LIQFEDFANHNAFDLL KY  +HLVFNDDIQGTASVVLAGL+S++K +GG+LA+  +LFLGA EAGTG
Sbjct:  279 DVGTNNEQLLNDEFYIGLRQRRATGKEYHELMEEFMSAVKQIYGEKVLIQFEDFANHNAFDLLAKYSKSHLVFNDDIQGTASVVLAGLLSSLKVVGGTLAEHTYLFLGAGEAGTG 393          
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 6.610e-44
Identity = 87/115 (75.65%), Postives = 100/115 (86.96%), Query Frame = 3
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVG    K +DDEFYIGLRQ+RA GQEY+ELL EFM AVK NYGE++LIQFEDFANHNAF+LL KYGT+HLVFNDDIQGTASVVLAGL++A+  +GGSL++  FLFLGA EAGTG
Sbjct:  215 DVG-QTMKFVDDEFYIGLRQRRATGQEYSELLDEFMYAVKQNYGEKVLIQFEDFANHNAFNLLAKYGTSHLVFNDDIQGTASVVLAGLMAALNLVGGSLSEHTFLFLGAGEAGTG 328          
BLAST of CX291262 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.417e-31
Identity = 68/115 (59.13%), Postives = 78/115 (67.83%), Query Frame = 3
Query:    3 DVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKXNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAREAGTG 347
            DVGT NE+LL D  YIGLRQ+R  G EY + L EFM AV   YG   LIQFEDFAN NAF LL KY   +  FNDDIQGTASV +AGL++A++     L+DQ  LF GA EA  G
Sbjct:  194 DVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALG 308          
The following BLAST results are available for this feature:
BLAST of CX291262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_POPTR1.329e-5286.96NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOC_FLAPR1.919e-5184.35NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_FLATR3.273e-5186.21NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_MESCR2.771e-5081.74NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOX_PHAVU1.986e-4879.13NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOX_VITVI2.593e-4878.26NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOC_MAIZE4.891e-4778.26NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOC_ORYSJ1.205e-4575.65NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_SOLLC6.610e-4475.65NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOX_HUMAN6.417e-3159.13NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]

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Properties
Property NameValue
Genbank descriptionC03006A03SK OF2 Citrus clementina cDNA clone C03006A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291262 ID=CX291262; Name=CX291262; organism=Citrus clementina; type=EST; length=347bp
TTGATGTGGGGACAAACAATGAGAAGTTGTTGGATGATGAGTTCTACATT
GGGCTCAGGCAGAAGAGGGCTATTGGACAGGAATATGCTGAACTGCTACA
TGAATTCATGACAGCTGTGAAGCANAATTATGGGGAGAGAATTCTCATTC
AGTTTGAAGACTTTGCAAACCACAATGCCTTTGATCTGCTTGAAAAATAT
GGCACTACTCATCTTGTTTTCAATGATGATATTCAGGGGACAGCATCTGT
GGTCCTTGCAGGTCTTATTTCAGCGATGAAATTTCTTGGAGGAAGCTTAG
CCGACCAAAGATTTTTATTCCTTGGTGCACGAGAAGCTGGCACTGGA
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