CX291297
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: RUBB_BRANA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.246e-30 Identity = 68/77 (88.31%), Postives = 70/77 (90.91%), Query Frame = 1 Query: 4 GTRSTQDAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234 G STQDAV KRV I+ LIE AEQDYE+EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG Sbjct: 388 GDGSTQDAVQKRVTQIKNLIEQAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 464
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: RUBB_ARATH (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490 PE=1 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 4.246e-30 Identity = 68/77 (88.31%), Postives = 70/77 (90.91%), Query Frame = 1 Query: 4 GTRSTQDAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234 G STQDAV KRV I+ LIE AEQDYE+EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG Sbjct: 388 GDGSTQDAVKKRVTQIKNLIEQAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 464
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: RUBB_SECCE (RuBisCO large subunit-binding protein subunit beta, chloroplastic (Fragment) OS=Secale cereale GN=CPN60 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.695e-29 Identity = 66/77 (85.71%), Postives = 71/77 (92.21%), Query Frame = 1 Query: 4 GTRSTQDAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234 G STQ+ V+KRVA I+ LIE AEQDYE+EKLNERIAKL+GGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG Sbjct: 287 GDGSTQEEVTKRVAQIKNLIEAAEQDYEKEKLNERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 363
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 6.779e-28 Identity = 64/77 (83.12%), Postives = 71/77 (92.21%), Query Frame = 1 Query: 4 GTRSTQDAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234 G STQ+AV+KRV+ I+ IE AEQ+YE+EKL+ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG Sbjct: 382 GDGSTQEAVNKRVSQIKNQIEAAEQEYEKEKLSERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 458
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: RUBC_CHLRE (RuBisCO large subunit-binding protein subunit beta-2 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.371e-25 Identity = 59/77 (76.62%), Postives = 63/77 (81.82%), Query Frame = 1 Query: 4 GTRSTQDAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234 G TQ V RV IR L EQ+YE+EKLNERIA+LSGGVA+IQVGAQTETELKEKKLRVEDALNATKAAVEEG Sbjct: 49 GDGRTQQQVEGRVKQIRNLAAETEQEYEKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAVEEG 125
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: RUBB_CHLRE (RuBisCO large subunit-binding protein subunit beta-1 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.756e-24 Identity = 58/77 (75.32%), Postives = 63/77 (81.82%), Query Frame = 1 Query: 4 GTRSTQDAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234 G ST V+ RV IR L +QDYEREKL ERIA+LSGGVA+IQVGAQTETELKEKKLRVEDALNAT+AAVEEG Sbjct: 218 GDGSTAADVAARVKQIRNLQMQTDQDYEREKLQERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATRAAVEEG 294
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: CH601_SYNPW (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH7803) GN=groL1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.013e-23 Identity = 53/76 (69.74%), Postives = 68/76 (89.47%), Query Frame = 1 Query: 7 TRSTQDAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234 + ++DAV++RVA IR +EN++ +Y+REKLNERIAKL+GGVAVI+VGA TETELK +KLR+EDALNAT+AAVEEG Sbjct: 333 SEDSRDAVAERVASIRRELENSDSEYDREKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEG 408
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: CH602_SYNJB (60 kDa chaperonin 2 OS=Synechococcus sp. GN=groL2 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.566e-23 Identity = 53/74 (71.62%), Postives = 64/74 (86.49%), Query Frame = 1 Query: 13 STQDAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234 ST+ AV KRVA IR +E + +Y+REKL ERIAKL+GGVAVI+VGA TETELK++KLR+EDALNAT+AAVEEG Sbjct: 336 STKAAVEKRVAQIRKQLETTDSEYDREKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATRAAVEEG 409
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: CH601_SYNJA (60 kDa chaperonin 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL1 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.566e-23 Identity = 53/74 (71.62%), Postives = 64/74 (86.49%), Query Frame = 1 Query: 13 STQDAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234 ST+ AV KRVA IR +E + +Y+REKL ERIAKL+GGVAVI+VGA TETELK++KLR+EDALNAT+AAVEEG Sbjct: 336 STKAAVEKRVAQIRKQLETTDSEYDREKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATRAAVEEG 409
BLAST of CX291297 vs. ExPASy Swiss-Prot
Match: CH60_CARHZ (60 kDa chaperonin OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.575e-23 Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 1 Query: 4 GTRSTQDAVSKRVAHIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 234 G + + +A+ KR+A I+ IE D++REKL ER+AKL+GGVAVIQVGA TETE+KEKKLR+EDALNAT+AAVEEG Sbjct: 333 GGQGSPEAIEKRIAQIKKQIEETTSDFDREKLQERLAKLAGGVAVIQVGAATETEMKEKKLRIEDALNATRAAVEEG 409 The following BLAST results are available for this feature:
BLAST of CX291297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291297 ID=CX291297; Name=CX291297; organism=Citrus clementina; type=EST; length=235bpback to top |