CX291309

Overview
NameCX291309
Unique NameCX291309
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length338
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15491 contig Ccv1_Contig15491:186..523. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291309 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 9.941e-56
Identity = 102/112 (91.07%), Postives = 106/112 (94.64%), Query Frame = 1
Query:    1 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDNMDPNELVKLIEILNPQNKPGRIT 336
            VDEALGFM+AAGLTVDHPIM TTEFWTSHECLLLPYEQSLTRLDSTSG YYDCSAHF+WVGERTRQLDGAHVEFL+GVANPLGIKVSD MDP+ LVKLIEILNP NK GRIT
Sbjct:  291 VDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFIWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPSALVKLIEILNPDNKAGRIT 402          
BLAST of CX291309 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 2.215e-55
Identity = 101/112 (90.18%), Postives = 106/112 (94.64%), Query Frame = 1
Query:    1 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDNMDPNELVKLIEILNPQNKPGRIT 336
            VDEALGFM+AAGLT+DHPIM TTEFWTSHECLLLPYEQSLTR DSTSG YYDCSAHFLWVGERTRQLDGAHVEFL+G+ANPLGIKVSD MDP+ LVKLIEILNPQNK GRIT
Sbjct:  290 VDEALGFMTAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNKAGRIT 401          
BLAST of CX291309 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 6.444e-55
Identity = 100/112 (89.29%), Postives = 106/112 (94.64%), Query Frame = 1
Query:    1 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDNMDPNELVKLIEILNPQNKPGRIT 336
            VDEALGFM+AAGLTVDHPIMTTT+FWTSHECLLLPYEQSLTR DSTSG +YDCSAH LWVGERTRQLDGAHVEFL+GVANPLGIKVSD M+P +LVKLIEILNP NKPGRIT
Sbjct:  281 VDEALGFMTAAGLTVDHPIMTTTDFWTSHECLLLPYEQSLTREDSTSGLFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPRDLVKLIEILNPSNKPGRIT 392          
BLAST of CX291309 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 8.416e-55
Identity = 100/112 (89.29%), Postives = 106/112 (94.64%), Query Frame = 1
Query:    1 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDNMDPNELVKLIEILNPQNKPGRIT 336
            VDEALGFM+AAGLT+DHPIM TTEFWTSHECLLLPYEQSLTR DSTSG +YDCSAHFLWVGERTRQLDGAHVEFL+G+ANPLGIKVSD MDP+ LVKLIEILNPQNK GRIT
Sbjct:  290 VDEALGFMTAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLHYDCSAHFLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNKAGRIT 401          
BLAST of CX291309 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 1.436e-54
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 1
Query:    1 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDNMDPNELVKLIEILNPQNKPGRIT 336
            VDEALGFMSAAGLTVDHP+MT+T+FWTSHECLLLPYEQSLTR DST+G +YDCSAH LWVGERTRQLDGAHVEFL+GVANPLGIKVSD M+P ELVKLIEILNP NKPGRIT
Sbjct:  296 VDEALGFMSAAGLTVDHPLMTSTDFWTSHECLLLPYEQSLTRQDSTTGHFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPTELVKLIEILNPSNKPGRIT 407          
BLAST of CX291309 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 4.177e-54
Identity = 97/112 (86.61%), Postives = 106/112 (94.64%), Query Frame = 1
Query:    1 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDNMDPNELVKLIEILNPQNKPGRIT 336
            VDEALGFM+AAGLTVDHPIM+TT+FWTSHECLLLPYEQ+LTR DSTSG +YDCSAH +WVGERTRQLDGAHVEFL+GVANPLGIKVS  MDPNEL+KLI+ILNP NKPGRIT
Sbjct:  263 VDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPNELIKLIDILNPANKPGRIT 374          
BLAST of CX291309 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 4.177e-54
Identity = 100/112 (89.29%), Postives = 104/112 (92.86%), Query Frame = 1
Query:    1 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDNMDPNELVKLIEILNPQNKPGRIT 336
            VDEALGFM AAGLT  HPIMTTTEFWTSHECLLLPYEQ+LTR DSTSG YYDCSAH LWVGERTRQLDGAHVEFL+G+ANPLGIKVSD M P+ELVKLIEILNPQNKPGRIT
Sbjct:  253 VDEALGFMGAAGLTSAHPIMTTTEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMVPSELVKLIEILNPQNKPGRIT 364          
BLAST of CX291309 vs. ExPASy Swiss-Prot
Match: AROF_CATRO (Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 5.455e-54
Identity = 99/112 (88.39%), Postives = 102/112 (91.07%), Query Frame = 1
Query:    1 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDNMDPNELVKLIEILNPQNKPGRIT 336
            VDEALGFM A GLTVDHPIM TTEFWTSHECLLLPYEQ+LTR DSTSG +YDCSAH LWVGERTRQLDGAHVEFL+GVANPLGIKVS  MDPNELV LIEILNP NKPGRIT
Sbjct:  254 VDEALGFMDACGLTVDHPIMATTEFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPNELVNLIEILNPTNKPGRIT 365          
BLAST of CX291309 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 2.073e-53
Identity = 96/112 (85.71%), Postives = 105/112 (93.75%), Query Frame = 1
Query:    1 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDNMDPNELVKLIEILNPQNKPGRIT 336
            VDEALGFM+AAGLTVDHPIM+TT+FWTSHECLLLPYEQ+LTR DSTSG +YDCSAH +WVGERTRQLDGAHVEFL+GVANPLGIKVS  MDP EL+KLI+ILNP NKPGRIT
Sbjct:  263 VDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPKELIKLIDILNPANKPGRIT 374          
BLAST of CX291309 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 2.292e-52
Identity = 95/112 (84.82%), Postives = 103/112 (91.96%), Query Frame = 1
Query:    1 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDNMDPNELVKLIEILNPQNKPGRIT 336
            VDEALGFMSA GL  DHP+MTTT+F+TSHECLLLPYEQSLTRLDSTSG YYDCSAH +W GERTRQLDGAHVEFL+G+ANPLGIKVS+ MDP ELVKL+EILNP NKPGRIT
Sbjct:  276 VDEALGFMSACGLGTDHPLMTTTDFYTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMVWCGERTRQLDGAHVEFLRGIANPLGIKVSNKMDPFELVKLVEILNPNNKPGRIT 387          
The following BLAST results are available for this feature:
BLAST of CX291309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
AROF_TOBAC9.941e-5691.07Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_SOLTU2.215e-5590.18Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ORYSJ6.444e-5589.29Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_SOLLC8.416e-5589.29Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ORYSJ1.436e-5488.39Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLTU4.177e-5486.61Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_ARATH4.177e-5489.29Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_CATRO5.455e-5488.39Probable phospho-2-dehydro-3-deoxyheptonate aldola... [more]
AROF_SOLLC2.073e-5385.71Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_ARATH2.292e-5284.82Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]

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Properties
Property NameValue
Genbank descriptionC03006E09SK OF2 Citrus clementina cDNA clone C03006E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291309 ID=CX291309; Name=CX291309; organism=Citrus clementina; type=EST; length=338bp
GTTGATGAGGCCCTTGGATTCATGTCTGCAGCTGGACTCACCGTTGACCA
TCCTATCATGACAACTACTGAGTTCTGGACATCCCATGAGTGCTTGCTCT
TGCCATATGAGCAATCTCTAACCCGGCTGGATTCAACTTCTGGTTTTTAC
TATGATTGCTCTGCCCATTTTCTTTGGGTTGGAGAACGTACCAGGCAGCT
GGATGGTGCACATGTTGAGTTTTTGAAAGGTGTAGCAAATCCCCTTGGCA
TTAAGGTCAGTGATAACATGGATCCTAATGAGCTAGTGAAGCTTATTGAG
ATTTTGAATCCTCAGAATAAACCGGGGAGGATAACTAT
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