CX291326

Overview
NameCX291326
Unique NameCX291326
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length532
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: ATK1_ARATH (Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 2.621e-73
Identity = 141/172 (81.98%), Postives = 152/172 (88.37%), Query Frame = 1
Query:   16 RSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            RSLEQIFQ SQ L  QGWK+KMQ SMLEIYNETIRDLLST+R    DL R ++G  GKQY I HD NG+THVSDLTI DVCS+ KISSLL+QAAQSRSVGKTQMNE SSRSHFVFT+RI GVNE+TEQQVQGVLNLIDLAGSERLS+SGATGDRLKETQAINKSLS+LSDVI
Sbjct:  541 RSLEQIFQASQSLGAQGWKYKMQVSMLEIYNETIRDLLSTNRTTSMDLVRADSGTSGKQYTITHDVNGHTHVSDLTIFDVCSVGKISSLLQQAAQSRSVGKTQMNEQSSRSHFVFTMRISGVNESTEQQVQGVLNLIDLAGSERLSKSGATGDRLKETQAINKSLSALSDVI 712          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: ATK3_ARATH (Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 4.195e-63
Identity = 126/172 (73.26%), Postives = 149/172 (86.63%), Query Frame = 1
Query:   16 RSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            R LEQIF+T Q L  QGWK+++Q SMLEIYNETIRDLLST++    +  RT++GV  +++AIKHDA+GNTHV++LTI+DV S  ++S LL  AA++RSVGKTQMNE SSRSHFVFTLRI GVNE+TEQQVQGVLNLIDLAGSERLS+SG+TGDRLKETQAINKSLSSL DVI
Sbjct:  506 RCLEQIFETRQSLRSQGWKYELQVSMLEIYNETIRDLLSTNK----EAVRTDSGVSPQKHAIKHDASGNTHVAELTILDVKSSREVSFLLDHAARNRSVGKTQMNEQSSRSHFVFTLRISGVNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLGDVI 673          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: ATK2_ARATH (Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 2.082e-62
Identity = 125/172 (72.67%), Postives = 145/172 (84.30%), Query Frame = 1
Query:   16 RSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            R LEQIFQT Q L  QGWK+++Q SMLEIYNETIRDLLST++    +  R +NGV  ++YAIKHDA+GNTHV +LT+VDV S  ++S LL  AA++RSVGKT MNE SSRSHFVFTL+I G NE+TEQQVQGVLNLIDLAGSERLS+SG+TGDRLKETQAINKSLSSL DVI
Sbjct:  497 RCLEQIFQTRQSLRSQGWKYELQVSMLEIYNETIRDLLSTNK----EAVRADNGVSPQKYAIKHDASGNTHVVELTVVDVRSSKQVSFLLDHAARNRSVGKTAMNEQSSRSHFVFTLKISGFNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLGDVI 664          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIF2_DICDI (Kinesin-related protein 2 OS=Dictyostelium discoideum GN=kif2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.359e-37
Identity = 90/177 (50.85%), Postives = 120/177 (67.80%), Query Frame = 1
Query:   16 RSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGK----QYAIKHDANGN-THVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            R++E+IF + Q L  +GW ++++   LEIYNETI DLL+T        T T  G   K    +Y IKH+ + N T V+++T+V V   S++  LL  A ++RSV KT  NE SSRSH VF L++ G N+ + ++ QG+LNLIDLAGSER+SRSG  G +LKETQAINKSLSSL DVI
Sbjct:  553 RTVEKIFSSIQDLTEKGWTYQIECFFLEIYNETINDLLNT--------TTTTTGGNSKSNEIKYEIKHNPDTNVTTVTNMTVVPVTHPSQVYELLNLANKNRSVAKTLCNERSSRSHTVFQLKLIGYNQQSSERTQGLLNLIDLAGSERVSRSGVEGKQLKETQAINKSLSSLGDVI 721          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KLPA_EMENI (Kinesin-like protein klpA OS=Emericella nidulans GN=klpA PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.169e-35
Identity = 80/173 (46.24%), Postives = 113/173 (65.32%), Query Frame = 1
Query:   16 RSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDAN-GNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            R++ QI++T+  L  +GW++ M+ + +E+YNE + DLL  +             +  K+  I+HD   G T ++D T V + S   + SLL++AA +RSV  T+ NE SSRSH +F L++ G N  T ++ +G LNL+DLAGSERLS SGATGDRLKETQ IN+SLS L DVI
Sbjct:  526 RAVHQIYETATSLEEKGWRYTMEGNFVEVYNENLNDLLGKAEE-----------LDKKKLEIRHDMQRGKTTITDATTVQLESPEMVESLLKRAAANRSVAATKANERSSRSHSIFILKLIGENYITGERSEGTLNLVDLAGSERLSHSGATGDRLKETQNINRSLSCLGDVI 687          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KLP2_SCHPO (Kinesin-like protein 2 OS=Schizosaccharomyces pombe GN=klp2 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.482e-31
Identity = 79/172 (45.93%), Postives = 107/172 (62.21%), Query Frame = 1
Query:   19 SLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDAN-GNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            S+  I+  S  L  +GW+++M+   LEIYNETI DLL++           E     K+  I HD   G T ++++T   + +  +++ LL QA+++RSV  T  NE+SSRSH VF L + G N  T +  +  LNLIDLAGSERLS S + G+RLKETQAINKSLS L DVI
Sbjct:  583 SVRMIYNRSTSLKERGWEYRMEGQFLEIYNETIIDLLASGN---------EEEKGKKKLEIYHDTKAGRTTITNITSEPLDTPEQVTWLLDQASKNRSVAATNANEHSSRSHSVFMLHLNGSNSTTGETCRSTLNLIDLAGSERLSSSQSVGERLKETQAINKSLSCLGDVI 745          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: CTK2_XENLA (Carboxy-terminal kinesin 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 9.432e-31
Identity = 79/174 (45.40%), Postives = 112/174 (64.37%), Query Frame = 1
Query:   16 RSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIK--HDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            R++ QIF +++ L  +GW++   AS LEIYNETIRDLL         + R +  +   +Y I+  + AN   +V++L  V V  + ++  LL+ A  +RSV KT +N+ SSRSH VF L+I G N+  + +   +++LIDLAGSERL RS +TGDRLKETQ IN SLS+L  VI
Sbjct:  412 RAIHQIFSSAEELKAKGWQYTFTASFLEIYNETIRDLL---------INRPDKKL---EYEIRKVNSANMLLYVTNLRYVKVSCVEEVHELLKIAKANRSVAKTAINDRSSRSHSVFQLKIEGENKQRDLKTSSMISLIDLAGSERLDRSLSTGDRLKETQCINTSLSTLGMVI 573          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KLP1_SCHPO (Kinesin-like protein 1 OS=Schizosaccharomyces pombe GN=klp1 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 2.744e-30
Identity = 78/174 (44.83%), Postives = 104/174 (59.77%), Query Frame = 1
Query:   13 ARSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGN-THVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            A S++ IF     L  +GW +K++   LEIYNETI DLL+ +             +   ++ I HD     T V +++I+D      +  +L +A ++R +  T+ NE SSRSH VF L I G N  T+Q  +G LNL+DLAGSERLS S A GDRL+ETQAINKSLS L DVI
Sbjct:  593 AMSIKHIFNYLSTLREKGWVYKLRGQFLEIYNETIYDLLNKAEM-----------LKNPKHDIHHDEKERRTTVDNVSIIDFNEEDTVYKMLNRAGENRFIAATKANERSSRSHTVFMLYIDGENSRTKQICKGTLNLVDLAGSERLSYSQAVGDRLRETQAINKSLSCLGDVI 755          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KAR3_YEAST (Kinesin-like protein KAR3 OS=Saccharomyces cerevisiae GN=KAR3 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.079e-26
Identity = 70/172 (40.70%), Postives = 98/172 (56.98%), Query Frame = 1
Query:   19 SLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTH-VSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVI 531
            ++  IF     L  +GW +K+    +EIYNE I DLL       SD    E+   G ++ I+HD    T  ++++T   + S   +  +L++A + RS   T  NE+SSRSH +F + + G N  T     G LNL+DLAGSER++ S   GDRL+ETQ INKSLS L DVI
Sbjct:  495 TISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLR------SDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVI 660          
BLAST of CX291326 vs. ExPASy Swiss-Prot
Match: KIFC1_RAT (Kinesin-like protein KIFC1 OS=Rattus norvegicus GN=Kifc1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.921e-25
Identity = 74/177 (41.81%), Postives = 98/177 (55.37%), Query Frame = 1
Query:   16 RSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLST-SRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISKISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATG----DRLKETQAINKSLSSLSDVI 531
            R++  +F  +Q +  QGW +   AS +EIYNET+RDLL+T +R G           PG +            V++   V V    ++ +LL  A Q+R+V +T  NE SSRSH VF L+I G + A   Q    LNL+DLAGSERL      G    DRL+ETQAIN SLS+L  VI
Sbjct:  456 RAMRHLFSVAQEMSGQGWTYSFVASYVEIYNETVRDLLATGTRKGQGGDCEIRRAGPGSE---------ELTVTNARYVPVSCEKEVEALLHLAQQNRAVARTAQNERSSRSHSVFQLQISGEHAARGLQCGAPLNLVDLAGSERLDPGLTLGPGERDRLRETQAINSSLSTLGLVI 623          
The following BLAST results are available for this feature:
BLAST of CX291326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
ATK1_ARATH2.621e-7381.98Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=... [more]
ATK3_ARATH4.195e-6373.26Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=... [more]
ATK2_ARATH2.082e-6272.67Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=... [more]
KIF2_DICDI1.359e-3750.85Kinesin-related protein 2 OS=Dictyostelium discoid... [more]
KLPA_EMENI2.169e-3546.24Kinesin-like protein klpA OS=Emericella nidulans G... [more]
KLP2_SCHPO2.482e-3145.93Kinesin-like protein 2 OS=Schizosaccharomyces pomb... [more]
CTK2_XENLA9.432e-3145.40Carboxy-terminal kinesin 2 OS=Xenopus laevis PE=2 ... [more]
KLP1_SCHPO2.744e-3044.83Kinesin-like protein 1 OS=Schizosaccharomyces pomb... [more]
KAR3_YEAST1.079e-2640.70Kinesin-like protein KAR3 OS=Saccharomyces cerevis... [more]
KIFC1_RAT5.921e-2541.81Kinesin-like protein KIFC1 OS=Rattus norvegicus GN... [more]

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Properties
Property NameValue
Genbank descriptionC03006G03SK OF2 Citrus clementina cDNA clone C03006G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291326 ID=CX291326; Name=CX291326; organism=Citrus clementina; type=EST; length=532bp
ATTCCGCACGAGGCACGCTCATTGGAGCAGATATTCCAAACCAGTCAGTT
CCTTTTAGTACAGGGCTGGAAGTTCAAAATGCAGGCCTCAATGTTGGAGA
TATATAATGAAACTATCCGTGATCTGTTGTCCACAAGTCGAGCTGGTGGT
TCAGATTTGACACGTACGGAGAATGGTGTTCCTGGAAAGCAGTATGCAAT
TAAACATGATGCAAATGGAAACACTCATGTCAGCGACCTTACGATTGTTG
ATGTCTGTAGCATATCAAAGATTTCATCGCTTTTAAGGCAGGCTGCACAG
AGCAGGTCTGTGGGCAAGACTCAAATGAATGAGTATTCATCAAGAAGCCA
TTTTGTCTTCACGTTACGAATATTTGGAGTAAATGAAGCAACTGAACAAC
AAGTACAGGGTGTCTTAAACCTCATTGATCTAGCTGGAAGTGAGCGATTA
TCAAGAAGTGGGGCGACTGGTGACCGTTTGAAAGAAACTCAGGCCATAAA
TAAAAGCCTGTCATCATTGAGTGATGTTATAT
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