CX291359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CCR4B_ARATH (Carbon catabolite repressor protein 4 homolog 2 OS=Arabidopsis thaliana GN=CCR4-2 PE=2 SV=2) HSP 1 Score: 347.821 bits (891), Expect = 3.103e-95 Identity = 168/225 (74.67%), Postives = 193/225 (85.78%), Query Frame = 2 Query: 2 PAAVT-RSGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAETKLPVGHPNTLLTSRVIPAPSPSPRRLFPVNGSDMNMMGHIDSDGRISSTGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQSLTDAILPVPRRR 673 P+ +T ++GGET EVG KTYTP+ADDI HVLKFECVV +AETK VGHP+T+LTSRVIPAPSPSPR+L PVNG+D MGH+D D RI S G+F+VLSYNILSD A+S+ YSYCP WALSW YRRQNLLREI+GYRAD+VCLQEVQ+DHF E FAPELDKHGYQALYKRKTNEV +G+ IDGCATFFRRDRFSHVKKY+VEF KAAQSLTDA++P ++R Sbjct: 158 PSNITQKNGGETLVEVGGCKTYTPTADDISHVLKFECVVANAETKQIVGHPSTILTSRVIPAPSPSPRKLIPVNGADG--MGHLDQDARIQSAGSFTVLSYNILSDTSASSDLYSYCPPWALSWPYRRQNLLREIVGYRADVVCLQEVQSDHFHEIFAPELDKHGYQALYKRKTNEVLSGSTSAIDGCATFFRRDRFSHVKKYDVEFNKAAQSLTDALIPQAQKR 380
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CCR4A_ARATH (Carbon catabolite repressor protein 4 homolog 1 OS=Arabidopsis thaliana GN=CCR4-1 PE=2 SV=1) HSP 1 Score: 347.821 bits (891), Expect = 3.103e-95 Identity = 171/227 (75.33%), Postives = 197/227 (86.78%), Query Frame = 2 Query: 2 PAAVTR---SGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAETKLPVGHPNTLLTSRVIPAPSPSPRRLFPVNGSDMNMMGHIDSDGRISSTGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQSLTDAILPVPRRR 673 P+A+T+ +GGET EVGRSKTYTP ADDI HVLKFECVVV+AETK VG T+LTSRVIPAPSPSPRRL ++G+D+ GH+DS+GR S GTF+VLSYNILSD YA+S+ YSYCP+WAL+W YRRQNLLREI+ YRADIVCLQEVQNDHFEEFF PELDKHGYQ L+KRKTNEV+ GN +TIDGCATFFRRDRFSHVKKYEVEF KAAQSLT+AI+PV +++ Sbjct: 153 PSAITQKTGAGGETLVEVGRSKTYTPMADDICHVLKFECVVVNAETKQNVGLSCTILTSRVIPAPSPSPRRLISISGTDVT--GHLDSNGRPLSMGTFTVLSYNILSDTYASSDIYSYCPTWALAWTYRRQNLLREIVKYRADIVCLQEVQNDHFEEFFLPELDKHGYQGLFKRKTNEVFIGNTNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTEAIIPVSQKK 377
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CCR4_YEAST (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Saccharomyces cerevisiae GN=CCR4 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.821e-26 Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 2 Query: 281 TFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALY--KRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEF 619 TF+VLSYN L YAT + Y Y PSWALSW YRR L +++ Y +D++CLQEV++ FEE++ P LDKHGY ++ K + +++ + +DGC FF+RD+F + K ++F Sbjct: 504 TFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQLLSYDSDLLCLQEVESKTFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDF 618
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CNOT6_XENLA (CCR4-NOT transcription complex subunit 6 OS=Xenopus laevis GN=cnot6 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.421e-25 Identity = 59/164 (35.98%), Postives = 89/164 (54.27%), Query Frame = 2 Query: 152 NTLLTSRVIPAPSPSPRRLFPVNGSDMNMMGHIDSDGRISSTGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALY--KRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQS 637 N LL + + P PR + D R T FSV+ YN+L D YAT + Y YCPSWAL+W YR++ +++EI+ ADI+ LQEV+ + + FF EL + GY + K + + +DGCA FF+ ++F+ V+K+ VEF + A + Sbjct: 151 NYLLDNLSVSTEQPPPRSWIMLQEPD-----------RTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 303
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CNOT6_HUMAN (CCR4-NOT transcription complex subunit 6 OS=Homo sapiens GN=CNOT6 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 5.774e-25 Identity = 59/160 (36.88%), Postives = 88/160 (55.00%), Query Frame = 2 Query: 164 TSRVIPAPSPSPRRLFPVNGSDMNMMGHIDSDGRISSTGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALY--KRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQS 637 T++ I P PR + D R T FSV+ YN+L D YAT + Y YCPSWAL+W YR++ +++EI+ ADIV LQEV+ + + FF EL + GY + K + + +DGCA FF+ ++F+ V+K+ VEF + A + Sbjct: 160 TAKRITTEQPPPRSWIMLQEPD-----------RTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 308
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CNOT6_RAT (CCR4-NOT transcription complex subunit 6 OS=Rattus norvegicus GN=Cnot6 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.541e-25 Identity = 58/160 (36.25%), Postives = 88/160 (55.00%), Query Frame = 2 Query: 164 TSRVIPAPSPSPRRLFPVNGSDMNMMGHIDSDGRISSTGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALY--KRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQS 637 T++ I P PR + D R T FSV+ YN+L D YAT + Y YCPSWAL+W YR++ +++EI+ ADI+ LQEV+ + + FF EL + GY + K + + +DGCA FF+ ++F+ V+K+ VEF + A + Sbjct: 160 TAKRISTEQPPPRSWIMLQEPD-----------RTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 308
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CNOT6_MOUSE (CCR4-NOT transcription complex subunit 6 OS=Mus musculus GN=Cnot6 PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 7.541e-25 Identity = 58/160 (36.25%), Postives = 88/160 (55.00%), Query Frame = 2 Query: 164 TSRVIPAPSPSPRRLFPVNGSDMNMMGHIDSDGRISSTGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALY--KRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQS 637 T++ I P PR + D R T FSV+ YN+L D YAT + Y YCPSWAL+W YR++ +++EI+ ADI+ LQEV+ + + FF EL + GY + K + + +DGCA FF+ ++F+ V+K+ VEF + A + Sbjct: 160 TAKRISTEQPPPRSWIMLQEPD-----------RTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 308
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CCR4_USTMA (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Ustilago maydis GN=CCR4 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.680e-24 Identity = 56/158 (35.44%), Postives = 93/158 (58.86%), Query Frame = 2 Query: 179 PAPSPSPRRLFPVNGSDMNMMGHIDSDGRISSTGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALY--KRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQSLTD 646 P P P P R + + D+ + D ++ +F+VLSYNIL D YAT++ Y Y PSWAL+W YR++ +L+E++ Y ADI CLQEV + +E++F L + Y+ ++ K + + + +DGCA F++ +++ ++K VEF + A D Sbjct: 270 PVPLPPPEREWIMIDPDLPDLD-ADKHANDATQESFNVLSYNILFDRYATAQMYGYTPSWALAWDYRKEFILQEVMSYSADICCLQEVGVEQYEDYFLHHLSQQDYEGVFYPKSRARTMRDDERRRVDGCAIFYKSNKYQLIEKQLVEFNQIALQRPD 426
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CNO6L_MOUSE (CCR4-NOT transcription complex subunit 6-like OS=Mus musculus GN=Cnot6l PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 2.866e-24 Identity = 50/130 (38.46%), Postives = 80/130 (61.54%), Query Frame = 2 Query: 263 RISSTGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYKRKTNEVYNGNPHT--IDGCATFFRRDRFSHVKKYEVEFIKAAQSLTD 646 +I + +F+V+ YN+L D YAT + Y YCPSWAL+W YR++ ++ EI+ + ADI+ LQEV+ + + F P L GY + K+ +DGCA FF+ ++F+ V+K+ VEF + A + +D Sbjct: 182 QILPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQYFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSD 311
BLAST of CX291359 vs. ExPASy Swiss-Prot
Match: CN6LA_XENLA (CCR4-NOT transcription complex subunit 6-like-A OS=Xenopus laevis GN=cnot6l-A PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.743e-24 Identity = 51/121 (42.15%), Postives = 78/121 (64.46%), Query Frame = 2 Query: 281 TFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALY--KRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFIKAAQS 637 +F+V+ YN+L D YAT + Y YCPSWAL+W YR++ ++ EII ADI+ LQEV+ + + F P L++ GY + K + + + +DGCA FFR ++FS V+K+ VEF + A + Sbjct: 183 SFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMDEIISCDADIISLQEVETEQYFTLFMPALEERGYDGFFSPKSRAKIMSDQEKKHVDGCAIFFRTEKFSLVQKHTVEFNQIAMA 303 The following BLAST results are available for this feature:
BLAST of CX291359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291359 ID=CX291359; Name=CX291359; organism=Citrus clementina; type=EST; length=687bpback to top |