CX291413

Overview
NameCX291413
Unique NameCX291413
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX291413 vs. ExPASy Swiss-Prot
Match: TARB1_HUMAN (Probable methyltransferase TARBP1 OS=Homo sapiens GN=TARBP1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.525e-15
Identity = 34/51 (66.67%), Postives = 44/51 (86.27%), Query Frame = -2 
Query:   92 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 244
            +L+LG E+EGIP ++I  LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1562 LLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1612
The following BLAST results are available for this feature:
BLAST of CX291413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TARB1_HUMAN4.525e-1566.67Probable methyltransferase TARBP1 OS=Homo sapiens ... [more]
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Properties
Property NameValue
Genbank descriptionC03007F08SK OF2 Citrus clementina cDNA clone C03007F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291413 ID=CX291413; Name=CX291413; organism=Citrus clementina; type=EST; length=722bp
GAGGCTTACACTGATGTAAGGGGTAACGTCTGTACCCCATGTGTACATAT
GGAAGAATTTCCATCAAGAATAAAAGAAACTACTAAAATCTCTGCTGTCG
GGTATATTCCCAGAGGGCAATGGCACCACTGACATGAACATTCAGTGACC
TAACAACTCCCAATTGTGGAATCTCGATGCAAGCATCCAACATGTGGATT
ATGTCCACAGGTATACCCTCTTTTTCACGCCCAAGGACCAAGACCTGCCA
AAGAAGATGACATAAGTTTACTTCTGATGATTTATGTCCACAAGTATGGA
TTATTTAATTATTTAGTTAATTTATTCAAGAGAAGGCTTTCAATAACGAT
TATTGGAACTAAAAAATGCAAAGAGGCCCTCGAAATGGGAAGAGGCAAGA
GATTTAGATGATGTACCGTCTTTTTGGGAAACATATACTGATCAAGAGGT
ATACTATTTGCAGTCTGCTCTAACCCCAAGACAGAGAAGTCTTCATGTTT
CTTTCTCTCTAAGAAATGCTTAATGCTATTAACAGGAACTTCAACAATAG
GAACCCACTTCTCCGCTGTCACACTGGAAAATGAAATGCTTGTAAATGGT
TTGATCAGGAAACACAGTTCAAAACCTGAAATGAATTTACTTTACATATG
CTAATTACATAACAAGTATAGAAGCATTTATGAAAAACCACTTGAATAAA
TCTTTTAAGAGTAGATGCTCTC
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