CX291429

Overview
NameCX291429
Unique NameCX291429
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291429 vs. ExPASy Swiss-Prot
Match: AGAL_CYATE (Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.625e-69
Identity = 117/142 (82.39%), Postives = 131/142 (92.25%), Query Frame = 1
Query:  238 NIRRNLIDNGLGRAPPMGWNSWNHFGCNIQEKLIRETADAMVTSGLAALGYQYINLDDCWAELNRDSKGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLQYDNCFNTG 663
            N+RR L +NGLG+ PPMGWNSWNHFGC+I E ++RETADAMV++GLAALGYQYINLDDCWAELNRDS+GN VP A+AFP+GIKALADYVH+KGLKLG+YSDAG QTCSK MPGSLGHEEQDAKTFASWGVDYL+YDNC N G
Sbjct:   42 NVRRYLAENGLGQTPPMGWNSWNHFGCDINENVVRETADAMVSTGLAALGYQYINLDDCWAELNRDSEGNMVPNAAAFPSGIKALADYVHSKGLKLGVYSDAGNQTCSKRMPGSLGHEEQDAKTFASWGVDYLKYDNCENLG 183          
BLAST of CX291429 vs. ExPASy Swiss-Prot
Match: AGAL_COFAR (Alpha-galactosidase OS=Coffea arabica PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.728e-69
Identity = 119/138 (86.23%), Postives = 128/138 (92.75%), Query Frame = 1
Query:  244 RRNLIDNGLGRAPPMGWNSWNHFGCNIQEKLIRETADAMVTSGLAALGYQYINLDDCWAELNRDSKGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLQYDNCFN 657
            RR+L+ NGLG  PPMGWNSWNHF CN+ EKLIRETADAMV+ GLAALGY+YINLDDCWAELNRDS+GN VPK S FP+GIKALADYVH+KGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYL+YDNC N
Sbjct:   12 RRSLLANGLGLTPPMGWNSWNHFRCNLDEKLIRETADAMVSKGLAALGYKYINLDDCWAELNRDSQGNLVPKGSTFPSGIKALADYVHSKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCNN 149          
BLAST of CX291429 vs. ExPASy Swiss-Prot
Match: AGAL_ORYSJ (Alpha-galactosidase OS=Oryza sativa subsp. japonica GN=Os10g0493600 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.128e-62
Identity = 107/143 (74.83%), Postives = 120/143 (83.92%), Query Frame = 1
Query:  235 RNIRRNLIDNGLGRAPPMGWNSWNHFGCNIQEKLIRETADAMVTSGLAALGYQYINLDDCWAELNRDSKGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLQYDNCFNTG 663
            R  RR   +NGLGR P MGWNSWNHF C I E++IRETADA+V +GLA LGYQY+N+DDCWAE +RDS+GNFVP    FP+GIKALADYVHAKGLKLGIYSDAG+QTCS  MPGSL HEEQD KTFASWGVDYL+YDNC + G
Sbjct:   49 RRARRRAFENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAG 191          
BLAST of CX291429 vs. ExPASy Swiss-Prot
Match: AGAL_DICDI (Probable alpha-galactosidase OS=Dictyostelium discoideum GN=melA PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.136e-38
Identity = 72/137 (52.55%), Postives = 96/137 (70.07%), Query Frame = 1
Query:  250 NLIDNGLGRAPPMGWNSWNHFGCNIQEKLIRETADAMVTSGLAALGYQYINLDDCWAELNRDSKGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLQYDNCFNT 660
            N +DNGL   P MGW+SWN + CNI E +I  TA AMV++G+A  GY Y+N+DDCWA   R   G      + FP GIK +ADY+H+ GLK+GIY+DAGT+TC K + GS G+E  DA+T+A WG+DY++ D C+ T
Sbjct:   18 NALDNGLALTPQMGWSSWNFYACNINESVIMNTAKAMVSNGMADAGYTYVNIDDCWAG-GRYPNGTVYADPTNFPNGIKYVADYIHSLGLKIGIYTDAGTETCQKRV-GSYGYEANDAQTYAEWGIDYVKEDWCYAT 152          
BLAST of CX291429 vs. ExPASy Swiss-Prot
Match: NAGAB_CHICK (Alpha-N-acetylgalactosaminidase OS=Gallus gallus GN=NAGA PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.362e-38
Identity = 75/146 (51.37%), Postives = 90/146 (61.64%), Query Frame = 1
Query:  256 IDNGLGRAPPMGWNSWNHFGCN----------IQEKLIRETADAMVTSGLAALGYQYINLDDCWAELNRDSKGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLQYDNCFNTG 663
            ++NGL R PPMGW +W  F CN          I E L  E AD +   G   LGY+YIN+DDCWA   RD++G  VP    FP GIKALADYVHA+GLKL IY D G  TC      +L   EQDA+TFA WGVD L+ D C+++G
Sbjct:    1 LENGLARTPPMGWLAWERFRCNVNCREDPRQCISEMLFMEMADRIAEDGWRELGYKYINIDDCWAAKQRDAEGRLVPDPERFPRGIKALADYVHARGLKLDIYGDLGRLTCGGYPGTTLDRVEQDAQTFAEWGVDMLKLDGCYSSG 146          
BLAST of CX291429 vs. ExPASy Swiss-Prot
Match: MEL_ZYGCI (Alpha-galactosidase OS=Zygosaccharomyces cidri GN=MEL PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.093e-36
Identity = 71/134 (52.99%), Postives = 93/134 (69.40%), Query Frame = 1
Query:  262 NGLGRAPPMGWNSWNHFGCNIQEKLIRETADAMVTSGLAALGYQYINLDDCWAELNRDSKGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLQYDNCFNTG 663
            NGLG  P MGW++WN FGC+++E+L+  TA+ +V  GL  LGY YI LDDCW+   R S G+ +   S FP G+K +A+ +H   LK G+YS AG  TC+    GSLG+E+ DA TFASW VDYL+YDNC+N G
Sbjct:   23 NGLGLTPQMGWDNWNSFGCSVKEELLLGTAEKIVKLGLKDLGYNYIILDDCWSS-GRSSNGSLLADDSKFPHGMKYVAEQLHNSQLKFGMYSSAGEYTCA-GYAGSLGYEDMDAATFASWDVDYLKYDNCYNKG 154          
BLAST of CX291429 vs. ExPASy Swiss-Prot
Match: MEL_ZYGMR (Alpha-galactosidase OS=Zygosaccharomyces mrakii GN=MEL PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.000e-36
Identity = 71/134 (52.99%), Postives = 92/134 (68.66%), Query Frame = 1
Query:  262 NGLGRAPPMGWNSWNHFGCNIQEKLIRETADAMVTSGLAALGYQYINLDDCWAELNRDSKGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLQYDNCFNTG 663
            NGLG  P MGWN+WN F CN+ E+L+  TAD +   GL  +GY Y+ LDDCW+   R S G+ VP  + FP G+K +AD++H + L  G+YS AG  TC+   PGSLGHEE+DA+ FA   VDYL+YDNC+N G
Sbjct:   24 NGLGLTPQMGWNNWNTFACNVTEQLLLGTADRISELGLKDVGYNYVILDDCWSG-GRSSNGSLVPDLNKFPHGMKYVADHLHDQDLLFGMYSSAGEYTCA-GYPGSLGHEEKDAQFFARNEVDYLKYDNCYNKG 155          
BLAST of CX291429 vs. ExPASy Swiss-Prot
Match: MEL_TORDE (Alpha-galactosidase OS=Torulaspora delbrueckii GN=MEL PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.175e-35
Identity = 70/134 (52.24%), Postives = 87/134 (64.93%), Query Frame = 1
Query:  262 NGLGRAPPMGWNSWNHFGCNIQEKLIRETADAMVTSGLAALGYQYINLDDCWAELNRDSKGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLQYDNCFNTG 663
            NGLG  P MGWN+WN F CN+ E L+  T D +   GL  +GY Y+ LDDCW++  RDS G  VP ++ FP G+K +ADY+H K    G+YS AG  TC+    GSL HEE DA  FA   VDYL+YDNC+N G
Sbjct:   25 NGLGLTPQMGWNNWNTFACNVSEDLLLSTVDRIAALGLRDIGYHYVILDDCWSD-GRDSDGMLVPDSTKFPNGMKHVADYLHGKDFLFGMYSSAGEYTCA-GYAGSLDHEEDDAAFFAKNEVDYLKYDNCYNRG 156          
BLAST of CX291429 vs. ExPASy Swiss-Prot
Match: AGAL_SCHPO (Probable alpha-galactosidase OS=Schizosaccharomyces pombe GN=SPAC869.07c PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.619e-35
Identity = 70/135 (51.85%), Postives = 87/135 (64.44%), Query Frame = 1
Query:  262 NGLGRAPPMGWNSWNHFGCNIQEKLIRETADAMVTSGLAALGYQYINLDDCWAELNRD-SKGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLQYDNCFNTG 663
            NGLG  P MGWNSWN + C+I E +I   A A+   GL  LGY+YI +DDCW++  R+ + G        FP GI ++A  +H  G K G+YS AG  TC+   PGSL HE+ DA TFA WGVDYL+YDNCFN G
Sbjct:   27 NGLGLKPQMGWNSWNKYACDIDESIILNNAKAIKEEGLLDLGYEYIVMDDCWSKHERNATTGRLEANPDKFPNGIGSMAKKLHDMGFKFGMYSSAGKYTCA-GFPGSLNHEQIDADTFADWGVDYLKYDNCFNEG 160          
BLAST of CX291429 vs. ExPASy Swiss-Prot
Match: AGAL_HUMAN (Alpha-galactosidase A OS=Homo sapiens GN=GLA PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.619e-35
Identity = 70/143 (48.95%), Postives = 89/143 (62.24%), Query Frame = 1
Query:  256 IDNGLGRAPPMGWNSWNHFGCN----------IQEKLIRETADAMVTSGLAALGYQYINLDDCWAELNRDSKGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLQYDNCF 654
            +DNGL R P MGW  W  F CN          I EKL  E A+ MV+ G    GY+Y+ +DDCW    RDS+G        FP GI+ LA+YVH+KGLKLGIY+D G +TC+   PGS G+ + DA+TFA WGVD L++D C+
Sbjct:   32 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCA-GFPGSFGYYDIDAQTFADWGVDLLKFDGCY 173          
The following BLAST results are available for this feature:
BLAST of CX291429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
AGAL_CYATE1.625e-6982.39Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=... [more]
AGAL_COFAR4.728e-6986.23Alpha-galactosidase OS=Coffea arabica PE=1 SV=1[more]
AGAL_ORYSJ1.128e-6274.83Alpha-galactosidase OS=Oryza sativa subsp. japonic... [more]
AGAL_DICDI1.136e-3852.55Probable alpha-galactosidase OS=Dictyostelium disc... [more]
NAGAB_CHICK7.362e-3851.37Alpha-N-acetylgalactosaminidase OS=Gallus gallus G... [more]
MEL_ZYGCI3.093e-3652.99Alpha-galactosidase OS=Zygosaccharomyces cidri GN=... [more]
MEL_ZYGMR9.000e-3652.99Alpha-galactosidase OS=Zygosaccharomyces mrakii GN... [more]
MEL_TORDE1.175e-3552.24Alpha-galactosidase OS=Torulaspora delbrueckii GN=... [more]
AGAL_SCHPO2.619e-3551.85Probable alpha-galactosidase OS=Schizosaccharomyce... [more]
AGAL_HUMAN7.619e-3548.95Alpha-galactosidase A OS=Homo sapiens GN=GLA PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC03007G12SK OF2 Citrus clementina cDNA clone C03007G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291429 ID=CX291429; Name=CX291429; organism=Citrus clementina; type=EST; length=668bp
AGGACTCTATATAATATACATTCCACCTCCGCCTCTGAGCCAACTTCTAT
CTTCATTACTTTTTCTTTCGCATCTTCTTGTTCTGCTTATAGATAAATAA
ATATAAATCTATATACTCATATAGCCATGGATACTTCAGCCTCAGCCACG
ATGGCCGCCTTGTGTTTTTTCCTGATCTTAAATGCCGAAGCCGCTGCCGC
CGTCCGCCATGGCCAGAAGATAACAGGGGGTGGCAGAAATATTCGAAGGA
ATCTCATTGATAATGGACTTGGTCGAGCACCACCCATGGGATGGAATAGT
TGGAATCACTTCGGTTGCAACATTCAAGAGAAGCTGATTAGGGAAACAGC
CGATGCAATGGTGACATCTGGACTTGCTGCCTTAGGGTACCAATATATAA
ATTTAGATGATTGCTGGGCTGAACTTAATAGAGACTCCAAGGGAAATTTC
GTTCCTAAAGCTTCAGCATTTCCAGCTGGAATCAAAGCATTAGCAGATTA
TGTTCATGCCAAAGGGCTAAAGCTTGGAATTTATTCAGACGCTGGGACTC
AAACCTGCAGTAAAACTATGCCTGGATCTTTAGGCCACGAGGAACAAGAT
GCTAAAACCTTTGCTTCTTGGGGAGTTGATTACTTGCAGTATGATAATTG
CTTTAATACTGGTACAAG
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